Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|784800
Gene name
Locationscaffold_13:628963..630620
Strand+
Gene length (bp)1657
Transcript length (bp)1530
Coding sequence length (bp)1530
Protein length (aa) 510

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00400 WD40 WD domain, G-beta repeat 7.9E-02 299 328

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q62623|CDC20_RAT Cell division cycle protein 20 homolog OS=Rattus norvegicus GN=Cdc20 PE=1 SV=2 168 419 7.0E-26
sp|Q9JJ66|CDC20_MOUSE Cell division cycle protein 20 homolog OS=Mus musculus GN=Cdc20 PE=1 SV=2 168 419 3.0E-25
sp|Q5H7C0|CDC20_PIG Cell division cycle protein 20 homolog OS=Sus scrofa GN=CDC20 PE=2 SV=1 168 419 1.0E-22
sp|Q12834|CDC20_HUMAN Cell division cycle protein 20 homolog OS=Homo sapiens GN=CDC20 PE=1 SV=2 168 419 3.0E-22
sp|P78972|SLP1_SCHPO WD repeat-containing protein slp1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=slp1 PE=1 SV=1 165 419 5.0E-21
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Swissprot ID Swissprot Description Start End E-value
sp|Q62623|CDC20_RAT Cell division cycle protein 20 homolog OS=Rattus norvegicus GN=Cdc20 PE=1 SV=2 168 419 7.0E-26
sp|Q9JJ66|CDC20_MOUSE Cell division cycle protein 20 homolog OS=Mus musculus GN=Cdc20 PE=1 SV=2 168 419 3.0E-25
sp|Q5H7C0|CDC20_PIG Cell division cycle protein 20 homolog OS=Sus scrofa GN=CDC20 PE=2 SV=1 168 419 1.0E-22
sp|Q12834|CDC20_HUMAN Cell division cycle protein 20 homolog OS=Homo sapiens GN=CDC20 PE=1 SV=2 168 419 3.0E-22
sp|P78972|SLP1_SCHPO WD repeat-containing protein slp1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=slp1 PE=1 SV=1 165 419 5.0E-21
sp|Q9R1K5|FZR_MOUSE Fizzy-related protein homolog OS=Mus musculus GN=Fzr1 PE=1 SV=1 169 509 5.0E-20
sp|O13286|SRW1_SCHPO WD repeat-containing protein srw1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=srw1 PE=1 SV=1 165 456 6.0E-20
sp|Q9UM11|FZR_HUMAN Fizzy-related protein homolog OS=Homo sapiens GN=FZR1 PE=1 SV=2 169 453 2.0E-19
sp|Q9S7I8|CDC22_ARATH Cell division cycle 20.2, cofactor of APC complex OS=Arabidopsis thaliana GN=CDC20-2 PE=1 SV=1 169 419 2.0E-18
sp|Q9SZA4|CDC21_ARATH Cell division cycle 20.1, cofactor of APC complex OS=Arabidopsis thaliana GN=CDC20-1 PE=1 SV=1 169 419 2.0E-18
sp|Q3E906|CD205_ARATH Cell division cycle 20.5, cofactor of APC complex OS=Arabidopsis thaliana GN=CDC20-5 PE=1 SV=2 165 419 6.0E-18
sp|Q9S7H3|CD203_ARATH Cell division cycle 20.3, cofactor of APC complex OS=Arabidopsis thaliana GN=CDC20-3 PE=3 SV=1 165 419 6.0E-18
sp|Q4PSE4|CDC24_ARATH Cell division cycle 20.4, cofactor of APC complex OS=Arabidopsis thaliana GN=CDC20-4 PE=2 SV=1 169 419 1.0E-17
sp|P53197|CDH1_YEAST APC/C activator protein CDH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CDH1 PE=1 SV=1 167 421 4.0E-17
sp|Q8L3Z8|FZR2_ARATH Protein FIZZY-RELATED 2 OS=Arabidopsis thaliana GN=FZR2 PE=1 SV=1 169 457 4.0E-16
sp|Q8LPL5|FZR3_ARATH Protein FIZZY-RELATED 3 OS=Arabidopsis thaliana GN=FZR3 PE=1 SV=1 169 457 2.0E-15
sp|Q8VZS9|FZR1_ARATH Protein FIZZY-RELATED 1 OS=Arabidopsis thaliana GN=FZR1 PE=1 SV=1 169 421 2.0E-15
sp|Q54MZ3|CDC20_DICDI Anaphase-promoting complex subunit cdc20 OS=Dictyostelium discoideum GN=cdc20 PE=1 SV=1 169 421 6.0E-14
sp|P26309|CDC20_YEAST APC/C activator protein CDC20 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CDC20 PE=1 SV=2 165 419 8.0E-14
sp|Q86Y33|CD20B_HUMAN Cell division cycle protein 20 homolog B OS=Homo sapiens GN=CDC20B PE=1 SV=3 164 424 2.0E-13
sp|Q54KM3|CDH1_DICDI Anaphase-promoting complex subunit cdh1 OS=Dictyostelium discoideum GN=cdh1 PE=3 SV=1 169 457 4.0E-13
sp|F4K5R6|CDC26_ARATH Cell division cycle 20.6, cofactor of APC complex OS=Arabidopsis thaliana GN=CDC20-6 PE=3 SV=1 230 419 1.0E-12
sp|O94423|MFR1_SCHPO Meiotic fizzy-related protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mfr1 PE=1 SV=1 169 458 4.0E-12
sp|O94411|MFR2_SCHPO Meiotic fizzy-related protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mfr2 PE=1 SV=1 230 421 6.0E-09
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GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No

SignalP

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SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 16 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|784800
MSLSVLTRMRKRVLSQPDDPPAEGSRKRLRVSSITSDLRRSILGDSLASTSSEGTRRSNSFNYGNDSERSIHLPR
TISSTAIFSRPPSPSRASSPMVFPERSSTYIDEGGLALMRSASVSSIRSTTPPAHPTFLDSSAKYHLRNLKITID
YSVPTSAIPGTLGSGDATNFTPHLLSCSTSNVLCFSRGNRVHFKNMGGGSEDIGQLCKLQEDRGDLKVIECGGSD
MPHRVALGTTKGFVQIWDLKVKKMTMSWSTKGVSVMRWNGPVLTVGGLKGTIRHYDTRVEPKSKMKDLAPKWTRH
QARITSLAWNINGKILASGDESGMVYCWEQGKKVPLDVGEFVQRRKKIQHSGIVSAVAWCTWHPRILASGDSKGI
LRLWNVEAGSSSSNGLMPGMLDLGASITSLHFSPHTKEFVSTHGASVTDAPASEGLSRPRFSMANSVTVHAFPSL
RHVNTVSVMNKPYRDCVLNAQGTKLILEIPEENKLGICDVWSKRKELKRHSSFLDSAIR*
Coding >Agabi119p4|784800
ATGAGTCTTTCCGTCCTGACTCGGATGAGGAAGCGCGTACTTTCGCAACCAGATGATCCTCCGGCTGAGGGCTCG
AGGAAACGCCTGCGAGTGTCCTCTATTACGTCTGACTTGCGCCGTTCAATTTTAGGAGATTCTTTGGCCAGTACT
TCGTCAGAAGGCACCCGACGATCGAATTCATTCAACTACGGCAACGACTCCGAACGTAGTATCCATCTCCCACGG
ACAATCAGCAGCACTGCTATATTCAGTCGACCTCCTTCCCCCAGCCGTGCCTCGAGTCCCATGGTATTCCCTGAG
CGTAGTTCTACTTACATTGATGAAGGAGGTCTAGCACTCATGCGTAGTGCTTCTGTCTCCTCCATACGCTCGACT
ACGCCGCCCGCTCATCCGACTTTTTTGGATTCTTCGGCAAAATACCATTTGAGGAATCTTAAGATCACGATTGAT
TACAGCGTTCCGACGAGTGCCATACCAGGAACTTTAGGCTCCGGAGATGCAACCAACTTTACACCACATTTATTG
AGCTGTTCGACTTCTAATGTGCTATGCTTCAGCCGGGGCAATAGGGTACATTTTAAGAATATGGGTGGCGGGAGC
GAGGATATAGGACAACTGTGTAAACTCCAAGAGGACAGGGGCGATCTGAAGGTCATCGAATGTGGGGGAAGTGAT
ATGCCTCATAGGGTGGCGTTGGGCACAACCAAGGGATTTGTACAGATATGGGATTTGAAGGTCAAGAAAATGACG
ATGAGCTGGAGCACGAAGGGGGTATCCGTCATGAGGTGGAATGGACCTGTACTGACCGTTGGTGGACTCAAGGGG
ACCATTCGACACTACGATACGCGGGTCGAGCCGAAATCGAAGATGAAAGACCTGGCACCGAAGTGGACTAGGCAT
CAAGCAAGAATTACTAGTTTGGCTTGGAATATTAACGGCAAGATTCTAGCAAGCGGGGACGAGTCTGGAATGGTA
TATTGCTGGGAGCAAGGCAAAAAGGTTCCTTTAGATGTTGGGGAGTTTGTGCAGAGACGGAAGAAGATACAACAC
AGCGGCATAGTTTCAGCTGTGGCTTGGTGTACATGGCATCCAAGAATCCTTGCTTCCGGCGACTCGAAGGGCATC
CTACGTCTATGGAATGTAGAGGCCGGTAGCTCAAGCTCCAATGGCTTAATGCCTGGGATGCTGGATCTTGGAGCT
TCTATTACGAGTCTGCATTTTTCCCCCCATACCAAGGAATTTGTATCGACACATGGAGCTTCCGTGACTGACGCG
CCGGCTTCAGAAGGCCTGTCGCGTCCAAGGTTTTCCATGGCTAACTCTGTCACCGTACACGCCTTTCCCTCTTTG
CGCCATGTCAACACGGTGTCGGTTATGAATAAACCATATAGGGACTGCGTGCTCAATGCACAGGGTACGAAGCTC
ATTCTTGAGATTCCTGAGGAGAACAAACTCGGAATTTGTGACGTGTGGTCAAAACGGAAGGAACTCAAAAGACAT
TCCAGTTTTTTGGATTCTGCTATACGATGA
Transcript >Agabi119p4|784800
ATGAGTCTTTCCGTCCTGACTCGGATGAGGAAGCGCGTACTTTCGCAACCAGATGATCCTCCGGCTGAGGGCTCG
AGGAAACGCCTGCGAGTGTCCTCTATTACGTCTGACTTGCGCCGTTCAATTTTAGGAGATTCTTTGGCCAGTACT
TCGTCAGAAGGCACCCGACGATCGAATTCATTCAACTACGGCAACGACTCCGAACGTAGTATCCATCTCCCACGG
ACAATCAGCAGCACTGCTATATTCAGTCGACCTCCTTCCCCCAGCCGTGCCTCGAGTCCCATGGTATTCCCTGAG
CGTAGTTCTACTTACATTGATGAAGGAGGTCTAGCACTCATGCGTAGTGCTTCTGTCTCCTCCATACGCTCGACT
ACGCCGCCCGCTCATCCGACTTTTTTGGATTCTTCGGCAAAATACCATTTGAGGAATCTTAAGATCACGATTGAT
TACAGCGTTCCGACGAGTGCCATACCAGGAACTTTAGGCTCCGGAGATGCAACCAACTTTACACCACATTTATTG
AGCTGTTCGACTTCTAATGTGCTATGCTTCAGCCGGGGCAATAGGGTACATTTTAAGAATATGGGTGGCGGGAGC
GAGGATATAGGACAACTGTGTAAACTCCAAGAGGACAGGGGCGATCTGAAGGTCATCGAATGTGGGGGAAGTGAT
ATGCCTCATAGGGTGGCGTTGGGCACAACCAAGGGATTTGTACAGATATGGGATTTGAAGGTCAAGAAAATGACG
ATGAGCTGGAGCACGAAGGGGGTATCCGTCATGAGGTGGAATGGACCTGTACTGACCGTTGGTGGACTCAAGGGG
ACCATTCGACACTACGATACGCGGGTCGAGCCGAAATCGAAGATGAAAGACCTGGCACCGAAGTGGACTAGGCAT
CAAGCAAGAATTACTAGTTTGGCTTGGAATATTAACGGCAAGATTCTAGCAAGCGGGGACGAGTCTGGAATGGTA
TATTGCTGGGAGCAAGGCAAAAAGGTTCCTTTAGATGTTGGGGAGTTTGTGCAGAGACGGAAGAAGATACAACAC
AGCGGCATAGTTTCAGCTGTGGCTTGGTGTACATGGCATCCAAGAATCCTTGCTTCCGGCGACTCGAAGGGCATC
CTACGTCTATGGAATGTAGAGGCCGGTAGCTCAAGCTCCAATGGCTTAATGCCTGGGATGCTGGATCTTGGAGCT
TCTATTACGAGTCTGCATTTTTCCCCCCATACCAAGGAATTTGTATCGACACATGGAGCTTCCGTGACTGACGCG
CCGGCTTCAGAAGGCCTGTCGCGTCCAAGGTTTTCCATGGCTAACTCTGTCACCGTACACGCCTTTCCCTCTTTG
CGCCATGTCAACACGGTGTCGGTTATGAATAAACCATATAGGGACTGCGTGCTCAATGCACAGGGTACGAAGCTC
ATTCTTGAGATTCCTGAGGAGAACAAACTCGGAATTTGTGACGTGTGGTCAAAACGGAAGGAACTCAAAAGACAT
TCCAGTTTTTTGGATTCTGCTATACGATGA
Gene >Agabi119p4|784800
ATGAGTCTTTCCGTCCTGACTCGGATGAGGAAGCGCGTACTTTCGCAACCAGATGATCCTCCGGCTGAGGGCTCG
AGGAAACGCCTGCGAGTGTCCTCTATTACGTCTGACTTGCGCCGTTCAATTTTAGGAGATTCTTTGGCCAGTACT
TCGGTGTGTCTATCTCTGGCGAGGTCATCCACCTATCCCCCTCATACTTATGTCTGTCTTTCTGTGCCCAACAGT
CAGAAGGCACCCGACGATCGAATTCATTCAACTACGGCAACGACTCCGAACGTAGTATCCATCTCCCACGGACAA
TCAGCAGCACTGCTATATTCAGTCGACCTCCTTCCCCCAGCCGTGCCTCGAGTCCCATGGTATTCCCTGAGCGTA
GTTCTACTTACATTGATGAAGGAGGTCTAGCACTCATGCGTAGTGCTTCTGTCTCCTCCATACGCTCGACTACGC
CGCCCGCTCATCCGACTTTTTTGGATTCTTCGGCAAAATACCATTTGAGGAATCTTAAGATCACGATTGATTACA
GCGTTCCGACGAGTGCCATACCAGGAACTTTAGGCTCCGGAGATGCAACCAACTTTACACCACATTTATTGAGCT
GTTCGACTTCTAATGTGCTATGCTTCAGCCGGGGCAATAGGGTACATTTTAAGAATATGGGTGGCGGGAGCGAGG
ATATAGGACAACTGTGTAAACTCCAAGAGGACAGGGGCGATCTGAAGGTCATCGAATGTGGGGGAAGTGATATGC
CTCATAGGGTGGCGTTGGGCACAACCAAGGGATTTGTACAGATATGGGATTTGAAGGTCAAGAAAATGACGATGA
GCTGGAGCACGAAGGGGGTATCCGTCATGAGGTGGAATGGACCTGTACTGACCGTTGGTGGACTCAAGGGGACCA
TTCGACACTACGATACGCGGGTCGAGCCGAAATCGAAGATGAAAGACCTGGCACCGAAGTGGACTAGGCATCAAG
CAAGAATTACTAGTTTGGCTTGGAATATTAACGGCAAGATTCTAGCAAGCGGGGACGAGTCTGGAATGGTATATT
GCTGGGAGCAAGGCAAAAAGGTTCCTTTAGATGTTGGGGAGTTTGTGCAGAGACGGAAGAAGATACAACACAGCG
GCATAGTTTCAGTAGGTGGCGCTTGAAGTTCTCTACTGTCGGAGTGTCGTAATTAACCTGATTCTAGGCTGTGGC
TTGGTGTACATGGCATCCAAGAATCCTTGCTTCCGGCGACTCGAAGGGCATCCTACGTCTATGGAATGTAGAGGC
CGGTAGCTCAAGCTCCAATGGCTTAATGCCTGGGATGCTGGATCTTGGAGCTTCTATTACGAGTCTGCATTTTTC
CCCCCATACCAAGGAATTTGTATCGACACATGGAGCTTCCGTGACTGACGCGCCGGCTTCAGAAGGCCTGTCGCG
TCCAAGGTTTTCCATGGCTAACTCTGTCACCGTACACGCCTTTCCCTCTTTGCGCCATGTCAACACGGTGTCGGT
TATGAATAAACCATATAGGGACTGCGTGCTCAATGCACAGGGTACGAAGCTCATTCTTGAGATTCCTGAGGAGAA
CAAACTCGGAATTTGTGACGTGTGGTCAAAACGGAAGGAACTCAAAAGACATTCCAGTTTTTTGGATTCTGCTAT
ACGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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