Fungal Genomics

General Properties

Protein ID	Agabi119p4|782000
Gene name
Location	scaffold_13:197209..199024
Strand	-
Gene length (bp)	1815
Transcript length (bp)	1422
Coding sequence length (bp)	1422
Protein length (aa)	474

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12937	F-box-like	F-box-like	1.3E-07	56	109

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0003674	molecular_function	No
GO:0005488	binding	No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	9721
Change Orthofinder run	5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|538100
Agaricus bisporus var burnettii H119p4	Agabi119p4|782000 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|782000 MLVPYCTHILTRNVNDEWVDNCHPPGLLVSCRRDNICIALSSCNVNNTPPFDSRVDLPKEILSYIFELVCAPTET DDPPNNCPRITLASVSSHWHEVVWTTPQLWRTYSARHPLKRMVSSLQMFADNHRAPSSIYLTFHFLGEEGIEALL QAFETVLLQDAASHIRQIVLTNLPPEYMTIIKVINERCFNIKKLYISKCRLSYDLSSWSYFLTTQFPSCWSTLTN LGLKGFPLDICFDSLFGCPQLIRLAWEVPTRPINGLTRPQHRQAQVTSFPHLEYLSLSFDSPRDWIPWFDSFVQF YQFPGLRELHWLISFHFHHQSPELLNRFLSTLPRCCDTLRLSIHIYYPYVTLKKWMKSALLHVGEIKNLIVSDDN PTSFLLMMQLFRDPAFFPSLTHFKYCCSMKDCVENEVIINSIYEALKGRKETSVKSFSLQVPLWEFPYWAAQRVE LSRLMDDASFKLEIIRGCEKLDL*
Coding	>Agabi119p4|782000 ATGCTGGTCCCTTACTGCACTCATATACTTACGAGAAATGTGAACGACGAATGGGTCGATAATTGTCACCCTCCA GGACTTCTTGTTTCATGCAGACGCGACAATATCTGCATAGCACTCTCTAGTTGCAACGTAAACAACACACCACCC TTCGATTCTCGCGTGGACCTACCCAAGGAAATTCTCTCATACATCTTTGAATTAGTCTGCGCACCCACCGAAACC GATGACCCTCCTAATAACTGTCCACGCATCACCTTGGCATCTGTCTCTAGCCATTGGCATGAGGTAGTCTGGACT ACACCTCAACTTTGGCGGACATACTCGGCTCGTCATCCTTTGAAGAGGATGGTGTCTTCGTTACAGATGTTTGCA GATAACCATCGTGCACCTAGTTCCATTTATCTTACTTTCCATTTTTTGGGAGAGGAAGGCATTGAAGCACTCTTG CAAGCTTTCGAAACGGTGTTATTACAGGACGCCGCGTCTCACATCCGCCAGATTGTGCTCACTAACCTTCCGCCT GAATATATGACAATCATAAAAGTCATCAATGAACGTTGTTTCAACATAAAAAAGCTTTACATATCCAAGTGTCGC CTGTCCTACGACCTTTCTTCCTGGTCGTATTTCTTGACCACTCAATTTCCATCTTGCTGGTCAACACTCACCAAC CTCGGATTAAAAGGCTTCCCTCTGGATATCTGTTTTGACTCCCTTTTCGGCTGTCCACAGCTAATCCGATTGGCA TGGGAAGTACCTACCAGACCTATCAACGGCCTCACTCGACCTCAACATCGTCAAGCTCAGGTGACGAGTTTTCCT CACCTGGAGTATCTGTCGCTGTCATTTGATTCTCCGAGAGATTGGATCCCTTGGTTTGATAGTTTCGTTCAGTTC TACCAGTTCCCGGGTCTCAGAGAACTGCATTGGCTCATCAGCTTTCATTTTCATCATCAATCCCCGGAACTCCTC AACCGTTTCTTGTCTACATTGCCACGATGCTGCGATACCCTTCGACTATCCATTCATATATATTATCCGTATGTG ACACTCAAAAAGTGGATGAAATCTGCCCTACTACATGTAGGAGAAATCAAGAACTTGATAGTTTCTGACGACAAT CCGACCTCGTTCTTGTTGATGATGCAGCTGTTTCGGGACCCAGCTTTCTTTCCGTCGCTGACGCATTTCAAATAC TGCTGCTCCATGAAAGACTGCGTAGAAAATGAAGTAATCATCAACTCGATCTATGAAGCGCTAAAGGGCAGGAAG GAAACCAGTGTCAAGTCATTTAGCTTACAGGTGCCCCTTTGGGAATTTCCCTATTGGGCGGCTCAGAGAGTAGAA CTTTCTCGACTCATGGATGATGCTAGTTTCAAACTCGAGATTATTCGTGGTTGCGAAAAGTTAGATCTTTGA
Transcript	>Agabi119p4|782000 ATGCTGGTCCCTTACTGCACTCATATACTTACGAGAAATGTGAACGACGAATGGGTCGATAATTGTCACCCTCCA GGACTTCTTGTTTCATGCAGACGCGACAATATCTGCATAGCACTCTCTAGTTGCAACGTAAACAACACACCACCC TTCGATTCTCGCGTGGACCTACCCAAGGAAATTCTCTCATACATCTTTGAATTAGTCTGCGCACCCACCGAAACC GATGACCCTCCTAATAACTGTCCACGCATCACCTTGGCATCTGTCTCTAGCCATTGGCATGAGGTAGTCTGGACT ACACCTCAACTTTGGCGGACATACTCGGCTCGTCATCCTTTGAAGAGGATGGTGTCTTCGTTACAGATGTTTGCA GATAACCATCGTGCACCTAGTTCCATTTATCTTACTTTCCATTTTTTGGGAGAGGAAGGCATTGAAGCACTCTTG CAAGCTTTCGAAACGGTGTTATTACAGGACGCCGCGTCTCACATCCGCCAGATTGTGCTCACTAACCTTCCGCCT GAATATATGACAATCATAAAAGTCATCAATGAACGTTGTTTCAACATAAAAAAGCTTTACATATCCAAGTGTCGC CTGTCCTACGACCTTTCTTCCTGGTCGTATTTCTTGACCACTCAATTTCCATCTTGCTGGTCAACACTCACCAAC CTCGGATTAAAAGGCTTCCCTCTGGATATCTGTTTTGACTCCCTTTTCGGCTGTCCACAGCTAATCCGATTGGCA TGGGAAGTACCTACCAGACCTATCAACGGCCTCACTCGACCTCAACATCGTCAAGCTCAGGTGACGAGTTTTCCT CACCTGGAGTATCTGTCGCTGTCATTTGATTCTCCGAGAGATTGGATCCCTTGGTTTGATAGTTTCGTTCAGTTC TACCAGTTCCCGGGTCTCAGAGAACTGCATTGGCTCATCAGCTTTCATTTTCATCATCAATCCCCGGAACTCCTC AACCGTTTCTTGTCTACATTGCCACGATGCTGCGATACCCTTCGACTATCCATTCATATATATTATCCGTATGTG ACACTCAAAAAGTGGATGAAATCTGCCCTACTACATGTAGGAGAAATCAAGAACTTGATAGTTTCTGACGACAAT CCGACCTCGTTCTTGTTGATGATGCAGCTGTTTCGGGACCCAGCTTTCTTTCCGTCGCTGACGCATTTCAAATAC TGCTGCTCCATGAAAGACTGCGTAGAAAATGAAGTAATCATCAACTCGATCTATGAAGCGCTAAAGGGCAGGAAG GAAACCAGTGTCAAGTCATTTAGCTTACAGGTGCCCCTTTGGGAATTTCCCTATTGGGCGGCTCAGAGAGTAGAA CTTTCTCGACTCATGGATGATGCTAGTTTCAAACTCGAGATTATTCGTGGTTGCGAAAAGTTAGATCTTTGA
Gene	>Agabi119p4|782000 ATGCTGGTCCCTTACTGTAAGTACTTACTGCGAGAGTAAAGATTGTTCTAACATTATCTTCGCTCGCTTTGGAAA ACGCGTTAAGGGGCTGGGTAGGAGCCTGGGGCTAATGGTCTTAGTTCATCATTTTTCTGTTGCACACTCGTTTCC CGCTTATGTACTGAACAGTGAAGAGGCACTCATATACTTACGAGAAATGTGAACGACGAATGGGTCGATAATTGT CGTATGTCACATGTCACCCCTTTTTTTGACGCTTATAAAGAACGTCCTCGAATCTTCAGACCCTCCAGGACTTCT TGTTTCATGCAGACGCGTAAGTGGTTTAGATTTGTGGCCTGCACTCCTTGTCAAAGCGTTCACGTTTTATCCAGG ACAATATCTGCATAGCACTCTCTAGTTGCAACGTAAACAACACACCACCCTTCGATTCTCGCGTGTACGTGACGG ACACAACGCCCCAACACCCATCGAAAATCCGCTTCTGCGATCCATCGTCTTCTCATGGCCGACTGGCAACTTCAT CGTCGCTTGAATACAACCTATTCATCGACTAGGGACCTACCCAAGGAAATTCTCTCATACATCTTTGAATTAGTC TGCGCACCCACCGAAACCGATGACCCTCCTAATAACTGTCCACGCATCACCTTGGCATCTGTCTCTAGCCATTGG CATGAGGTAGTCTGGACTACACCTCAACTTTGGCGGACATACTCGGCTCGTCATCCTTTGAAGAGGATGGTGTCT TCGTTACAGATGTTTGCAGATAACCATCGTGCACCTAGTTCCATTTATCTTACTTTCCATTTTTTGGGAGAGGAA GGCATTGAAGCACTCTTGCAAGCTTTCGAAACGGTGTTATTACAGGACGCCGCGTCTCACATCCGCCAGATTGTG CTCACTAACCTTCCGCCTGAATATATGACAATCATAAAAGTCATCAATGAACGTTGTTTCAACATAAAAAAGCTT TACATATCCAAGTGTCGCCTGTCCTACGACCTTTCTTCCTGGTCGTATTTCTTGACCACTCAATTTCCATCTTGC TGGTCAACACTCACCAACCTCGGATTAAAAGGCTTCCCTCTGGATATCTGTTTTGACTCCCTTTTCGGCTGTCCA CAGCTAATCCGATTGGCATGGGAAGTACCTACCAGACCTATCAACGGCCTCACTCGACCTCAACATCGTCAAGCT CAGGTGACGAGTTTTCCTCACCTGGAGTATCTGTCGCTGTCATTTGATTCTCCGAGAGATTGGATCCCTTGGTTT GATAGTTTCGTTCAGTTCTACCAGTTCCCGGGTCTCAGAGAACTGCATTGGCTCATCAGCTTTCATTTTCATCAT CAATCCCCGGAACTCCTCAACCGTTTCTTGTCTACATTGCCACGATGCTGCGATACCCTTCGACTATCCATTCAT ATATATTATCCGTATGTGACACTCAAAAAGTGGATGAAATCTGCCCTACTACATGTAGGAGAAATCAAGAACTTG ATAGTTTCTGACGACAATCCGACCTCGTTCTTGTTGATGATGCAGCTGTTTCGGGACCCAGCTTTCTTTCCGTCG CTGACGCATTTCAAATACTGCTGCTCCATGAAAGACTGCGTAGAAAATGAAGTAATCATCAACTCGATCTATGAA GCGCTAAAGGGCAGGAAGGAAACCAGTGTCAAGTCATTTAGCTTACAGGTGCCCCTTTGGGAATTTCCCTATTGG GCGGCTCAGAGAGTAGAACTTTCTCGACTCATGGATGATGCTAGTTTCAAACTCGAGATTATTCGTGGTTGCGAA AAGTTAGATCTTTGA