Fungal Genomics

at Utrecht University

General Properties

Protein ID	Agabi119p4\|779750
Gene name
Location	scaffold_13:33178..34415
Strand	-
Gene length (bp)	1237
Transcript length (bp)	888
Coding sequence length (bp)	888
Protein length (aa)	296

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01753	zf-MYND	MYND finger	6.2E-10	19	49

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 64	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4\|779750 MYAVPPTRVMPQDSGSKQGSLKLCQRCERALYCSSECQKTHWPTHKKHCVNSEYEASLQWNDMIIAASGKFGTPG LPVPPPGLTWQDLHKRFKKWFSFHMMTLFAVSIHSLQLPQDRAPTHILLIQIEYHNGSTEVAKHFKLNHTKVITL DEATDMAGPPMQTFREERKDHEGRVILAKNPFPGYRGYRIAQRFWKTVSTMANDSNAHDYCENISLYSKFYTFGV WYDAQPASSSVSPPDLVFVFFRNFFSFNLSHMKCVLVASCRITPIVVLVLITLTENFDSTRWRKLARLGC*
Coding	>Agabi119p4\|779750 ATGTATGCAGTACCCCCTACGCGGGTTATGCCACAGGACAGTGGATCTAAGCAAGGCTCGCTGAAGCTGTGTCAG AGATGTGAAAGAGCTTTGTATTGCTCGAGTGAATGTCAGAAAACGCATTGGCCAACGCATAAGAAACACTGCGTA AATTCAGAGTATGAGGCGTCTTTACAATGGAACGACATGATCATCGCAGCCAGCGGCAAATTTGGTACTCCTGGA CTTCCCGTTCCGCCACCTGGCTTGACATGGCAAGACCTTCACAAACGTTTCAAAAAATGGTTCTCTTTCCACATG ATGACCCTATTCGCAGTATCAATCCATAGCCTCCAACTTCCACAGGACCGCGCTCCTACCCATATTCTTCTCATA CAAATTGAGTATCACAATGGTAGCACTGAAGTCGCGAAACACTTCAAATTGAACCACACGAAGGTTATCACGCTA GATGAGGCTACCGATATGGCTGGACCCCCCATGCAAACGTTTAGAGAGGAGCGAAAAGACCATGAAGGCCGTGTC ATTCTCGCAAAGAATCCATTTCCAGGCTACCGTGGATACCGAATTGCCCAGAGATTTTGGAAGACCGTTTCCACA ATGGCAAACGATTCTAATGCTCATGATTATTGTGAAAACATATCATTGTATTCCAAGTTCTATACGTTCGGGGTT TGGTACGACGCTCAACCAGCGAGCTCCTCAGTCAGCCCCCCCGATCTAGTATTCGTGTTCTTCCGAAACTTTTTC TCCTTCAACCTTTCCCATATGAAATGTGTATTGGTTGCCTCATGTCGAATTACTCCCATTGTTGTACTTGTACTT ATCACATTGACTGAAAACTTCGACTCCACGCGTTGGCGAAAGCTCGCCCGACTGGGCTGCTAG
Transcript	>Agabi119p4\|779750 ATGTATGCAGTACCCCCTACGCGGGTTATGCCACAGGACAGTGGATCTAAGCAAGGCTCGCTGAAGCTGTGTCAG AGATGTGAAAGAGCTTTGTATTGCTCGAGTGAATGTCAGAAAACGCATTGGCCAACGCATAAGAAACACTGCGTA AATTCAGAGTATGAGGCGTCTTTACAATGGAACGACATGATCATCGCAGCCAGCGGCAAATTTGGTACTCCTGGA CTTCCCGTTCCGCCACCTGGCTTGACATGGCAAGACCTTCACAAACGTTTCAAAAAATGGTTCTCTTTCCACATG ATGACCCTATTCGCAGTATCAATCCATAGCCTCCAACTTCCACAGGACCGCGCTCCTACCCATATTCTTCTCATA CAAATTGAGTATCACAATGGTAGCACTGAAGTCGCGAAACACTTCAAATTGAACCACACGAAGGTTATCACGCTA GATGAGGCTACCGATATGGCTGGACCCCCCATGCAAACGTTTAGAGAGGAGCGAAAAGACCATGAAGGCCGTGTC ATTCTCGCAAAGAATCCATTTCCAGGCTACCGTGGATACCGAATTGCCCAGAGATTTTGGAAGACCGTTTCCACA ATGGCAAACGATTCTAATGCTCATGATTATTGTGAAAACATATCATTGTATTCCAAGTTCTATACGTTCGGGGTT TGGTACGACGCTCAACCAGCGAGCTCCTCAGTCAGCCCCCCCGATCTAGTATTCGTGTTCTTCCGAAACTTTTTC TCCTTCAACCTTTCCCATATGAAATGTGTATTGGTTGCCTCATGTCGAATTACTCCCATTGTTGTACTTGTACTT ATCACATTGACTGAAAACTTCGACTCCACGCGTTGGCGAAAGCTCGCCCGACTGGGCTGCTAG
Gene	>Agabi119p4\|779750 ATGTATGCAGTACCCCCTACGCGGGTTATGCCACAGGTTCAATCGTCCAATTTCCCTCTCGATGGTCGTACTGTC GCGTTGACTCGTCATATCCTCTCACAAGGACGTTGGTCAAAACTTACTACTCATTCTTGTTATAATTGTCGAAAG AGTGGATCTAAGCAAGGCTCGCTGAAGCTGTGTCAGAGATGTGAAAGAGCTTTGTGAGTCGACCTTTTCTTACGA GTTGCCAATTTTGATGTGTAAGAATGGGTGTCTTAGGTATTGCTCGAGTGAATGTCAGAAAACGCATTGGCCAGT ATGGATTCCAATTACTAATGATGCTCTTCATGTGTTCATGATCCATCTGATTTCTAGACGCATAAGAAACACTGC GTAAATTCAGAGTATGAGGCGTCTTTACAATGGAACGACATGATCATCGCAGCCAGCGGCAAATTTGGTACTCCT GGACTTCCCGTTCCGCCACCTGGCTTGACATGGCAAGACCTTCACAAACGTTTCAAAAAATGGTTCTCTTTCCAC ATGATGACCCTATTCGCAGTATCAATCCATAGCCTCCAACTTCCACAGGACCGCGCTCCTACCCATATTCTTCTC ATACAAATTGAGTATCACAATGGTAGCACTGAAGTCGCGAAACACTTCAAATTGAACCACACGAAGGTTATCACG CTAGATGAGGCTACCGATATGGCTGGACCCCCCATGCAAACGTTTAGAGAGGAGCGAAAAGACCATGAAGGCCGT GTCATTCTCGGTTTGTTGATCCAATGTCTCCCAATGATACCGGGGTTCCACGTCTTTCCTATCACGGGTCTTAGC AAAGAATCCATTTCCAGGCTACCGTGGATACCGAATTGCCCAGAGATTTTGGAAGACCGTTTCCACAATGGCAAA CGATTCTAATGCTCATGATTATTGGTAACTCTCCATGGCCACTACATTACACAATCACTGACTTCTGGAGTACTC CTTTAGTGAAAACATATCATTGTATTCCAAGTTCTATACGTTCGGGGTTTGGTACGACGCTCAACCAGCGAGCTC CTCAGTCAGCCCCCCCGATCTAGTATTCGTGTTCTTCCGAAACTTTTTCTCCTTCAACCTTTCCCATATGAAATG TGTATTGGTTGCCTCATGTCGAATTACTCCCATTGTTGTACTTGTACTTATCACATTGACTGAAAACTTCGACTC CACGCGTTGGCGAAAGCTCGCCCGACTGGGCTGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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