Fungal Genomics

General Properties

Protein ID	Agabi119p4|779600
Gene name
Location	scaffold_12:1550497..1551846
Strand	-
Gene length (bp)	1349
Transcript length (bp)	1242
Coding sequence length (bp)	1242
Protein length (aa)	414

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00646	F-box	F-box domain	1.3E-03	8	40

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0003674	molecular_function	No
GO:0005488	binding	No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	9227
Change Orthofinder run	5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|536400
Agaricus bisporus var bisporus H97	AgabiH97|033540
Agaricus bisporus var burnettii H119p4	Agabi119p4|779600 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|779600 MTYVMPRFDDLPLDIIREIIGHQVLTKADLCNLRRVSKNFGGLINPTLFATLSLDSKDITRDTPDFLKCQEIITA LADSSTTIFAHTRQLKFDASRIYSTKETEIEGISRVQRLVVERIHDAVSSLQSLQFMNFYVSVYYPERLTTNIIS ALGTLASFEGFDNLTLNENPPSSSFSIQFLSNLTIFRMSWEGRADVVVSDIASLLARCPQLSELYLANNSSSLQE LFAKVMETEGTWKLKELQLHGVDVSPDAMRAQARLFKHLTCLEIRNNSSLTAATDFGTICDILQQEQGVLLKSVS TDYPEDPLLLSYLCSHSGLTKLCFDSGKKLQPPDAADSGIYMEILERHLETLEHLQLHAGPLWTNIVTEMGLLKC QRLRTLRVDMTLSWEQLLTKKKAILVGISLSLLNIRTD*
Coding	>Agabi119p4|779600 ATGACCTATGTTATGCCTCGGTTTGACGATTTACCACTTGATATTATCCGTGAAATCATTGGACATCAAGTTCTA ACAAAAGCAGACCTTTGCAATCTTCGGCGAGTCTCGAAAAACTTTGGTGGTCTCATCAACCCTACGTTGTTCGCT ACTCTAAGCCTTGATTCCAAGGATATCACCAGAGACACACCCGATTTCCTGAAGTGTCAAGAGATCATTACTGCG CTTGCCGATAGTTCCACCACCATATTTGCGCACACTCGACAGCTCAAATTCGACGCATCCAGGATTTACAGCACA AAGGAAACAGAAATAGAGGGGATTTCTCGTGTTCAAAGACTAGTCGTTGAACGAATACATGACGCCGTTTCCTCC TTGCAAAGTCTTCAATTCATGAACTTCTATGTGTCAGTCTATTATCCAGAGCGACTGACTACTAATATTATAAGT GCTTTGGGAACACTCGCATCCTTCGAAGGCTTCGACAATCTCACTCTAAACGAAAATCCACCGTCGTCGTCGTTC TCGATCCAGTTCCTGTCCAATCTGACCATTTTTCGAATGTCCTGGGAGGGCAGAGCTGACGTTGTCGTATCCGAT ATTGCTTCGTTGCTGGCCCGATGTCCTCAATTATCCGAGCTCTATCTTGCCAACAACTCGTCATCGCTACAGGAG TTGTTTGCAAAAGTTATGGAAACGGAAGGGACGTGGAAGCTAAAAGAACTTCAACTCCATGGTGTAGATGTCAGC CCTGACGCTATGAGGGCTCAAGCGCGACTTTTCAAGCATCTGACTTGCCTTGAAATCAGAAACAACTCCAGTCTT ACTGCAGCCACCGATTTCGGGACCATTTGTGACATTCTCCAACAAGAACAAGGCGTATTGTTGAAAAGCGTATCG ACCGACTATCCAGAGGATCCATTGCTTCTTTCGTATCTTTGTTCACACTCTGGATTGACGAAGCTTTGTTTTGAT TCGGGGAAAAAGTTGCAGCCACCGGATGCTGCTGATAGCGGCATTTATATGGAGATCCTAGAAAGACACTTAGAA ACGTTGGAGCACCTTCAGCTGCATGCGGGACCCTTGTGGACTAATATTGTAACGGAGATGGGACTCTTGAAGTGT CAACGACTGCGAACTTTGCGAGTGGATATGACCTTGTCTTGGGAACAGCTGCTCACAAAGAAAAAAGCGATTTTG GTGGGTATTTCTCTCTCTCTGCTGAATATCCGTACCGACTGA
Transcript	>Agabi119p4|779600 ATGACCTATGTTATGCCTCGGTTTGACGATTTACCACTTGATATTATCCGTGAAATCATTGGACATCAAGTTCTA ACAAAAGCAGACCTTTGCAATCTTCGGCGAGTCTCGAAAAACTTTGGTGGTCTCATCAACCCTACGTTGTTCGCT ACTCTAAGCCTTGATTCCAAGGATATCACCAGAGACACACCCGATTTCCTGAAGTGTCAAGAGATCATTACTGCG CTTGCCGATAGTTCCACCACCATATTTGCGCACACTCGACAGCTCAAATTCGACGCATCCAGGATTTACAGCACA AAGGAAACAGAAATAGAGGGGATTTCTCGTGTTCAAAGACTAGTCGTTGAACGAATACATGACGCCGTTTCCTCC TTGCAAAGTCTTCAATTCATGAACTTCTATGTGTCAGTCTATTATCCAGAGCGACTGACTACTAATATTATAAGT GCTTTGGGAACACTCGCATCCTTCGAAGGCTTCGACAATCTCACTCTAAACGAAAATCCACCGTCGTCGTCGTTC TCGATCCAGTTCCTGTCCAATCTGACCATTTTTCGAATGTCCTGGGAGGGCAGAGCTGACGTTGTCGTATCCGAT ATTGCTTCGTTGCTGGCCCGATGTCCTCAATTATCCGAGCTCTATCTTGCCAACAACTCGTCATCGCTACAGGAG TTGTTTGCAAAAGTTATGGAAACGGAAGGGACGTGGAAGCTAAAAGAACTTCAACTCCATGGTGTAGATGTCAGC CCTGACGCTATGAGGGCTCAAGCGCGACTTTTCAAGCATCTGACTTGCCTTGAAATCAGAAACAACTCCAGTCTT ACTGCAGCCACCGATTTCGGGACCATTTGTGACATTCTCCAACAAGAACAAGGCGTATTGTTGAAAAGCGTATCG ACCGACTATCCAGAGGATCCATTGCTTCTTTCGTATCTTTGTTCACACTCTGGATTGACGAAGCTTTGTTTTGAT TCGGGGAAAAAGTTGCAGCCACCGGATGCTGCTGATAGCGGCATTTATATGGAGATCCTAGAAAGACACTTAGAA ACGTTGGAGCACCTTCAGCTGCATGCGGGACCCTTGTGGACTAATATTGTAACGGAGATGGGACTCTTGAAGTGT CAACGACTGCGAACTTTGCGAGTGGATATGACCTTGTCTTGGGAACAGCTGCTCACAAAGAAAAAAGCGATTTTG GTGGGTATTTCTCTCTCTCTGCTGAATATCCGTACCGACTGA
Gene	>Agabi119p4|779600 ATGACCTATGTTATGCCTCGGTTTGACGATTTACCACTTGATATTATCCGTGAAATCATTGGACATCAAGTTCTA GTAAGCGCTGAATCAGTCACTTGTATTGAAATTATGATACTGAATTTTTCTAGACAAAAGCAGACCTTTGCAATC TTCGGCGAGTCTCGAAAAACTTTGGTGGTCTCATCAACCCTACGTTGTTCGCTACTCTAAGCCTTGATTCCAAGG ATATCACCAGAGACACACCCGATTTCCTGAAGTGTCAAGAGATCATTACTGCGCTTGCCGATAGTTCCACCACCA TATTTGCGCACACTCGACAGCTCAAATTCGACGCATCCAGGATTTACAGCACAAAGGAAACAGAAATAGAGGGGA TTTCTCGTGTTCAAAGACTAGTCGTTGAACGAATACATGACGCCGTTTCCTCCTTGCAAAGTCTTCAATTCATGA AGTGAGAAGTTAAGTATCTTTCGATAAACCAACAAAGGTTGACCTCAGTTTCTAGCTTCTATGTGTCAGTCTATT ATCCAGAGCGACTGACTACTAATATTATAAGTGCTTTGGGAACACTCGCATCCTTCGAAGGCTTCGACAATCTCA CTCTAAACGAAAATCCACCGTCGTCGTCGTTCTCGATCCAGTTCCTGTCCAATCTGACCATTTTTCGAATGTCCT GGGAGGGCAGAGCTGACGTTGTCGTATCCGATATTGCTTCGTTGCTGGCCCGATGTCCTCAATTATCCGAGCTCT ATCTTGCCAACAACTCGTCATCGCTACAGGAGTTGTTTGCAAAAGTTATGGAAACGGAAGGGACGTGGAAGCTAA AAGAACTTCAACTCCATGGTGTAGATGTCAGCCCTGACGCTATGAGGGCTCAAGCGCGACTTTTCAAGCATCTGA CTTGCCTTGAAATCAGAAACAACTCCAGTCTTACTGCAGCCACCGATTTCGGGACCATTTGTGACATTCTCCAAC AAGAACAAGGCGTATTGTTGAAAAGCGTATCGACCGACTATCCAGAGGATCCATTGCTTCTTTCGTATCTTTGTT CACACTCTGGATTGACGAAGCTTTGTTTTGATTCGGGGAAAAAGTTGCAGCCACCGGATGCTGCTGATAGCGGCA TTTATATGGAGATCCTAGAAAGACACTTAGAAACGTTGGAGCACCTTCAGCTGCATGCGGGACCCTTGTGGACTA ATATTGTAACGGAGATGGGACTCTTGAAGTGTCAACGACTGCGAACTTTGCGAGTGGATATGACCTTGTCTTGGG AACAGCTGCTCACAAAGAAAAAAGCGATTTTGGTGGGTATTTCTCTCTCTCTGCTGAATATCCGTACCGACTGA