Fungal Genomics

at Utrecht University

General Properties

Protein ID	Agabi119p4\|779300
Gene name
Location	scaffold_12:1514977..1516075
Strand	+
Gene length (bp)	1098
Transcript length (bp)	714
Coding sequence length (bp)	714
Protein length (aa)	238

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00657	Lipase_GDSL	GDSL-like Lipase/Acylhydrolase	8.1E-11	37	235

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q99289\|HLT_VIBPA	Thermolabile hemolysin OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=VPA0226 PE=1 SV=2	37	231	2.0E-10

GO

GO Term	Description	Terminal node
GO:0016788	hydrolase activity, acting on ester bonds	Yes
GO:0003674	molecular_function	No
GO:0016787	hydrolase activity	No
GO:0003824	catalytic activity	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 22	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4\|779300 MISGLCDTYEVISGIGYTTNGWNGNGDPTAPHSSVCFSGGPPWSVQFTEKTGMNLVDLAIGGAAVDNSIIFTGPL DFVGQTTAFLEQVAPFPDKVSWNSSDSLFTVSFGTNDVNNSFQKTNDTGTRLYSQVMDSYFATVDRLYATGARNF VFNNVVPFDRAQIGVGQGPELQEKLKQSILEFNAQLESSADAYCNSKSDIDTCVIFDTHTLFADLMDHPDNFGFE NTDGFCQSYTNK*
Coding	>Agabi119p4\|779300 ATGATTTCGGGGCTGTGTGATACCTATGAGGTTATATCTGGGATTGGCTACACCACAAATGGTTGGAACGGAAAT GGTGACCCTACTGCTCCTCATAGTTCTGTCTGCTTCTCTGGCGGTCCTCCTTGGTCGGTTCAATTCACTGAAAAG ACAGGAATGAATCTTGTCGATCTCGCAATAGGCGGTGCTGCGGTTGATAACAGCATAATTTTCACAGGACCTCTC GATTTCGTAGGTCAGACTACGGCCTTCCTGGAACAGGTCGCGCCTTTCCCCGATAAAGTATCGTGGAACAGCAGC GATTCGTTGTTCACTGTCTCATTCGGAACCAACGACGTGAATAATTCGTTCCAAAAAACCAACGACACTGGAACA CGGCTCTACAGTCAAGTGATGGATTCATATTTCGCCACTGTGGATAGGCTATACGCCACCGGAGCGCGGAATTTT GTGTTCAACAACGTTGTTCCGTTCGATAGGGCACAAATTGGGGTTGGACAGGGCCCAGAACTCCAGGAAAAGTTG AAGCAAAGTATACTTGAATTCAATGCTCAACTTGAATCAAGCGCAGACGCATATTGCAATTCGAAATCCGATATC GACACCTGCGTTATTTTTGACACCCACACGCTCTTTGCCGATCTGATGGACCACCCAGATAACTTCGGGTTCGAG AATACCGACGGTTTTTGCCAATCGTATACGAATAAATAG
Transcript	>Agabi119p4\|779300 ATGATTTCGGGGCTGTGTGATACCTATGAGGTTATATCTGGGATTGGCTACACCACAAATGGTTGGAACGGAAAT GGTGACCCTACTGCTCCTCATAGTTCTGTCTGCTTCTCTGGCGGTCCTCCTTGGTCGGTTCAATTCACTGAAAAG ACAGGAATGAATCTTGTCGATCTCGCAATAGGCGGTGCTGCGGTTGATAACAGCATAATTTTCACAGGACCTCTC GATTTCGTAGGTCAGACTACGGCCTTCCTGGAACAGGTCGCGCCTTTCCCCGATAAAGTATCGTGGAACAGCAGC GATTCGTTGTTCACTGTCTCATTCGGAACCAACGACGTGAATAATTCGTTCCAAAAAACCAACGACACTGGAACA CGGCTCTACAGTCAAGTGATGGATTCATATTTCGCCACTGTGGATAGGCTATACGCCACCGGAGCGCGGAATTTT GTGTTCAACAACGTTGTTCCGTTCGATAGGGCACAAATTGGGGTTGGACAGGGCCCAGAACTCCAGGAAAAGTTG AAGCAAAGTATACTTGAATTCAATGCTCAACTTGAATCAAGCGCAGACGCATATTGCAATTCGAAATCCGATATC GACACCTGCGTTATTTTTGACACCCACACGCTCTTTGCCGATCTGATGGACCACCCAGATAACTTCGGGTTCGAG AATACCGACGGTTTTTGCCAATCGTATACGAATAAATAG
Gene	>Agabi119p4\|779300 ATGATTTCGGGGCTGTGTGATACCTATGAGGTTGTGATCATCTGCCTCCACTGGAATCGTCCCCAATGACTGAAT GATTCCACTTCGAAGATATCTGGGATTGGGTGAAGAATAATTTTGACCACGACTAAACATTACTACCATTCAACA GCTACAGTTAGTGTTCCATAGTCTTTCCTCGTGCGTAATTGTCGGACTGAATGTATTCTTCAACAGCCACAAATG GTTGGAACGGAAATGGTGACCCTACTGCTCCTCATAGTTCTGTCTGCTTCTCTGGCGGTCCTCCTTGGTCGGTTC AATTCACTGAAAAGACAGGAATGAATCTTGTCGATGTAGGTTCTGGCTCGTAATTTAGAGCTATACTGACAAGTT GAATATCGTTCAGCTCGCAATAGGCGGTGCTGCGGTTGATAACAGCATAATTTTCACAGGACCTCTCGATTTCGT AGGTCAGACTACGGCCTTCCTGGAACAGGTCGCGCCTTTCCCCGATAAAGTATCGTGGAACAGCAGCGATTCGTT GTTCACTGTCTCATTCGGAAGTTGAGCCTATCTTACATCTATCAATGGACAAGCAACTGATTTCTCGTGTTAGCC AACGACGTGAATAATTCGTTCCAAAAAACCAACGACACTGGAACACGGCTCTACAGTCAAGTGATGGATTCATAT TTCGCCACTGTGGATAGGCTATACGCCACCGGAGCGCGGAATTTTGTGTTCAACAACGTTGTTCCGTTCGATAGG GCACAAATTGGGGTTGGACAGGGCCCAGAACTCCAGGAAAAGTTGAAGGTACTCTTCTGATGATCACAGATTCAC AGATTTAGTCGACTTTGATCCGGCAGCAAAGTATACTTGAATTCAATGCTCAACTTGAATCAAGCGCAGACGCAT ATTGCAATTCGAAATCCGATATCGACACCTGCGTTATTTTTGACACCCGTACGAGCTATTATCCACAGCCGTCAC TCTATGAAACTCACGTTTGAATGAAATCGACCAGACACGCTCTTTGCCGATCTGATGGACCACCCAGATAACTTC GGGTTCGAGAATACCGACGGTTTTTGCCAATCGTATACGAATAAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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