Fungal Genomics

at Utrecht University

General Properties

Protein ID	Agabi119p4\|775050
Gene name
Location	scaffold_12:1162945..1163864
Strand	+
Gene length (bp)	919
Transcript length (bp)	750
Coding sequence length (bp)	750
Protein length (aa)	250

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01243	Putative_PNPOx	Pyridoxamine 5'-phosphate oxidase	1.5E-06	15	101

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 12	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	225	247	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4\|775050 MVKHYDEIPDFIIPWIKEQKLFWVATAPLSPEGHVNVSPKGIFDGNFNVVDSHRVWYEDMTGSGIETISHIRENG RITVMFNAFQGPPRICRLYGKGTVHEFDTPEYNALLSRSKRQPGSRSIIVVDIYHVSTSCGYSIPFFSFAGYRTK LHSYLANLQNMDCAAEETNDAPSEKGLKSYWKDKNMESLDGLSGLNSAYNSRAGYDYIDLKSFETRPNRKKPLWL NTQVTAAFMFGAVAGATLLRVLQR*
Coding	>Agabi119p4\|775050 ATGGTCAAGCATTACGACGAAATTCCAGATTTTATTATTCCATGGATCAAAGAACAAAAACTATTTTGGGTTGCG ACAGCTCCTTTGTCTCCTGAAGGTCATGTCAATGTATCTCCCAAGGGTATATTCGACGGTAATTTCAATGTCGTG GATTCTCATCGAGTTTGGTATGAAGACATGACTGGGAGTGGCATCGAGACTATCTCGCATATCAGAGAGAATGGT CGAATCACAGTTATGTTCAATGCTTTCCAAGGGCCTCCTAGGATCTGTCGGCTATATGGTAAAGGCACGGTGCAT GAATTCGATACACCGGAATACAATGCTCTGCTCTCGCGCAGTAAACGCCAACCCGGATCTCGTTCAATAATCGTA GTCGACATTTATCACGTTTCGACGTCATGTGGCTACAGCATCCCCTTCTTTTCATTTGCAGGATATCGCACGAAA CTTCATTCATACTTGGCTAATCTACAAAACATGGATTGTGCTGCGGAGGAAACAAACGATGCCCCCTCAGAGAAG GGGCTAAAAAGTTATTGGAAGGACAAAAATATGGAAAGCCTGGATGGACTTTCGGGTCTCAATTCGGCGTATAAT TCTCGAGCAGGTTATGATTATATCGATCTGAAGAGTTTCGAGACCCGGCCGAATAGGAAGAAGCCCCTATGGCTG AATACGCAGGTGACTGCCGCGTTTATGTTCGGAGCCGTGGCTGGTGCCACGTTGTTGAGGGTGTTGCAGCGGTAG
Transcript	>Agabi119p4\|775050 ATGGTCAAGCATTACGACGAAATTCCAGATTTTATTATTCCATGGATCAAAGAACAAAAACTATTTTGGGTTGCG ACAGCTCCTTTGTCTCCTGAAGGTCATGTCAATGTATCTCCCAAGGGTATATTCGACGGTAATTTCAATGTCGTG GATTCTCATCGAGTTTGGTATGAAGACATGACTGGGAGTGGCATCGAGACTATCTCGCATATCAGAGAGAATGGT CGAATCACAGTTATGTTCAATGCTTTCCAAGGGCCTCCTAGGATCTGTCGGCTATATGGTAAAGGCACGGTGCAT GAATTCGATACACCGGAATACAATGCTCTGCTCTCGCGCAGTAAACGCCAACCCGGATCTCGTTCAATAATCGTA GTCGACATTTATCACGTTTCGACGTCATGTGGCTACAGCATCCCCTTCTTTTCATTTGCAGGATATCGCACGAAA CTTCATTCATACTTGGCTAATCTACAAAACATGGATTGTGCTGCGGAGGAAACAAACGATGCCCCCTCAGAGAAG GGGCTAAAAAGTTATTGGAAGGACAAAAATATGGAAAGCCTGGATGGACTTTCGGGTCTCAATTCGGCGTATAAT TCTCGAGCAGGTTATGATTATATCGATCTGAAGAGTTTCGAGACCCGGCCGAATAGGAAGAAGCCCCTATGGCTG AATACGCAGGTGACTGCCGCGTTTATGTTCGGAGCCGTGGCTGGTGCCACGTTGTTGAGGGTGTTGCAGCGGTAG
Gene	>Agabi119p4\|775050 ATGGTCAAGCATTACGACGAAATTCCAGATTTTATTATTCCATGGATCAAAGAACAAAAACTATTTTGGGTTGCG ACAGCTCCTTTGTCTCCTGAAGGTCATGTCAATGTATCTCCCAAGGGTATATTCGACGGTAATTTCAATGTCGTG GATTCTCATCGAGTTTGGTATGAAGACATGACTGGGAGTGGTCAGTCGCTTGGCTTTTAAACCCTCGAAGAAGAT CATTAATTAAATGTTAACTTTTAGGCATCGAGACTATCTCGCATATCAGAGAGAATGGTCGAATCACAGTTATGT TCAATGCTTTCCAAGGGCCTCCTAGGATCTGTCGGCTATATGGTAAAGGTAACTGTTTCCGTGCCCTTCTTTGTG GATGTCATCACAAACACTCCCGCGAGGCACGGTGCATGAATTCGATACACCGGAATACAATGCTCTGCTCTCGCG CAGTAAACGCCAACCCGGATCTCGTTCAATAATCGTAGTCGACATTTATCACGTTTCGACGGTATGTACATAGGC CAATAACTAAGCCCCTCGGGTTCTGATAATTAAGCTGGTGTAGTCATGTGGCTACAGCATCCCCTTCTTTTCATT TGCAGGATATCGCACGAAACTTCATTCATACTTGGCTAATCTACAAAACATGGATTGTGCTGCGGAGGAAACAAA CGATGCCCCCTCAGAGAAGGGGCTAAAAAGTTATTGGAAGGACAAAAATATGGAAAGCCTGGATGGACTTTCGGG TCTCAATTCGGCGTATAATTCTCGAGCAGGTTATGATTATATCGATCTGAAGAGTTTCGAGACCCGGCCGAATAG GAAGAAGCCCCTATGGCTGAATACGCAGGTGACTGCCGCGTTTATGTTCGGAGCCGTGGCTGGTGCCACGTTGTT GAGGGTGTTGCAGCGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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