Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|775050
Gene name
Locationscaffold_12:1162945..1163864
Strand+
Gene length (bp)919
Transcript length (bp)750
Coding sequence length (bp)750
Protein length (aa) 250

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01243 Putative_PNPOx Pyridoxamine 5'-phosphate oxidase 1.5E-06 15 101

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

Domain # Start End Length
1 225 247 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|775050
MVKHYDEIPDFIIPWIKEQKLFWVATAPLSPEGHVNVSPKGIFDGNFNVVDSHRVWYEDMTGSGIETISHIRENG
RITVMFNAFQGPPRICRLYGKGTVHEFDTPEYNALLSRSKRQPGSRSIIVVDIYHVSTSCGYSIPFFSFAGYRTK
LHSYLANLQNMDCAAEETNDAPSEKGLKSYWKDKNMESLDGLSGLNSAYNSRAGYDYIDLKSFETRPNRKKPLWL
NTQVTAAFMFGAVAGATLLRVLQR*
Coding >Agabi119p4|775050
ATGGTCAAGCATTACGACGAAATTCCAGATTTTATTATTCCATGGATCAAAGAACAAAAACTATTTTGGGTTGCG
ACAGCTCCTTTGTCTCCTGAAGGTCATGTCAATGTATCTCCCAAGGGTATATTCGACGGTAATTTCAATGTCGTG
GATTCTCATCGAGTTTGGTATGAAGACATGACTGGGAGTGGCATCGAGACTATCTCGCATATCAGAGAGAATGGT
CGAATCACAGTTATGTTCAATGCTTTCCAAGGGCCTCCTAGGATCTGTCGGCTATATGGTAAAGGCACGGTGCAT
GAATTCGATACACCGGAATACAATGCTCTGCTCTCGCGCAGTAAACGCCAACCCGGATCTCGTTCAATAATCGTA
GTCGACATTTATCACGTTTCGACGTCATGTGGCTACAGCATCCCCTTCTTTTCATTTGCAGGATATCGCACGAAA
CTTCATTCATACTTGGCTAATCTACAAAACATGGATTGTGCTGCGGAGGAAACAAACGATGCCCCCTCAGAGAAG
GGGCTAAAAAGTTATTGGAAGGACAAAAATATGGAAAGCCTGGATGGACTTTCGGGTCTCAATTCGGCGTATAAT
TCTCGAGCAGGTTATGATTATATCGATCTGAAGAGTTTCGAGACCCGGCCGAATAGGAAGAAGCCCCTATGGCTG
AATACGCAGGTGACTGCCGCGTTTATGTTCGGAGCCGTGGCTGGTGCCACGTTGTTGAGGGTGTTGCAGCGGTAG
Transcript >Agabi119p4|775050
ATGGTCAAGCATTACGACGAAATTCCAGATTTTATTATTCCATGGATCAAAGAACAAAAACTATTTTGGGTTGCG
ACAGCTCCTTTGTCTCCTGAAGGTCATGTCAATGTATCTCCCAAGGGTATATTCGACGGTAATTTCAATGTCGTG
GATTCTCATCGAGTTTGGTATGAAGACATGACTGGGAGTGGCATCGAGACTATCTCGCATATCAGAGAGAATGGT
CGAATCACAGTTATGTTCAATGCTTTCCAAGGGCCTCCTAGGATCTGTCGGCTATATGGTAAAGGCACGGTGCAT
GAATTCGATACACCGGAATACAATGCTCTGCTCTCGCGCAGTAAACGCCAACCCGGATCTCGTTCAATAATCGTA
GTCGACATTTATCACGTTTCGACGTCATGTGGCTACAGCATCCCCTTCTTTTCATTTGCAGGATATCGCACGAAA
CTTCATTCATACTTGGCTAATCTACAAAACATGGATTGTGCTGCGGAGGAAACAAACGATGCCCCCTCAGAGAAG
GGGCTAAAAAGTTATTGGAAGGACAAAAATATGGAAAGCCTGGATGGACTTTCGGGTCTCAATTCGGCGTATAAT
TCTCGAGCAGGTTATGATTATATCGATCTGAAGAGTTTCGAGACCCGGCCGAATAGGAAGAAGCCCCTATGGCTG
AATACGCAGGTGACTGCCGCGTTTATGTTCGGAGCCGTGGCTGGTGCCACGTTGTTGAGGGTGTTGCAGCGGTAG
Gene >Agabi119p4|775050
ATGGTCAAGCATTACGACGAAATTCCAGATTTTATTATTCCATGGATCAAAGAACAAAAACTATTTTGGGTTGCG
ACAGCTCCTTTGTCTCCTGAAGGTCATGTCAATGTATCTCCCAAGGGTATATTCGACGGTAATTTCAATGTCGTG
GATTCTCATCGAGTTTGGTATGAAGACATGACTGGGAGTGGTCAGTCGCTTGGCTTTTAAACCCTCGAAGAAGAT
CATTAATTAAATGTTAACTTTTAGGCATCGAGACTATCTCGCATATCAGAGAGAATGGTCGAATCACAGTTATGT
TCAATGCTTTCCAAGGGCCTCCTAGGATCTGTCGGCTATATGGTAAAGGTAACTGTTTCCGTGCCCTTCTTTGTG
GATGTCATCACAAACACTCCCGCGAGGCACGGTGCATGAATTCGATACACCGGAATACAATGCTCTGCTCTCGCG
CAGTAAACGCCAACCCGGATCTCGTTCAATAATCGTAGTCGACATTTATCACGTTTCGACGGTATGTACATAGGC
CAATAACTAAGCCCCTCGGGTTCTGATAATTAAGCTGGTGTAGTCATGTGGCTACAGCATCCCCTTCTTTTCATT
TGCAGGATATCGCACGAAACTTCATTCATACTTGGCTAATCTACAAAACATGGATTGTGCTGCGGAGGAAACAAA
CGATGCCCCCTCAGAGAAGGGGCTAAAAAGTTATTGGAAGGACAAAAATATGGAAAGCCTGGATGGACTTTCGGG
TCTCAATTCGGCGTATAATTCTCGAGCAGGTTATGATTATATCGATCTGAAGAGTTTCGAGACCCGGCCGAATAG
GAAGAAGCCCCTATGGCTGAATACGCAGGTGACTGCCGCGTTTATGTTCGGAGCCGTGGCTGGTGCCACGTTGTT
GAGGGTGTTGCAGCGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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