Fungal Genomics

General Properties

Protein ID	Agabi119p4|774200
Gene name
Location	scaffold_12:949193..950212
Strand	-
Gene length (bp)	1019
Transcript length (bp)	633
Coding sequence length (bp)	633
Protein length (aa)	211

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF02845	CUE	CUE domain	1.0E-10	48	86

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp|Q6BKU8|CUE1_DEBHA	Coupling of ubiquitin conjugation to ER degradation protein 1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=CUE1 PE=3 SV=1	48	192	5.0E-11
sp|Q59NY7|CUE1_CANAL	Coupling of ubiquitin conjugation to ER degradation protein 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CUE1 PE=3 SV=2	47	192	2.0E-07

GO

GO Term	Description	Terminal node
GO:0043130	ubiquitin binding	Yes
GO:0005515	protein binding	No
GO:0032182	ubiquitin-like protein binding	No
GO:0005488	binding	No
GO:0003674	molecular_function	No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

Domain #	Start	End	Length
1	5	22	17

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	9716
Change Orthofinder run	5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|526900
Agaricus bisporus var burnettii H119p4	Agabi119p4|774200 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|774200 MGEIVNVLVAFAVIVFLFRWATSGNNPHDNSRQRSPAELLGFRPKNVTQEMITTISNMFPDIPADNIRYDLLRSG SIEVTTNKILEKGYLDAPPAAYYTLYPRTNRAPQPHAHPHDRRSASHAERKAAEKKETLISRFKLEQRIGSEKGE IVNEEDVGGKAVWEDTAEKREASLKERKAKMILAARERFLAQQEKSRLASGSGSSSGIQS*
Coding	>Agabi119p4|774200 ATGGGTGAAATCGTCAATGTCCTCGTCGCCTTTGCGGTTATTGTCTTCCTCTTTCGATGGGCGACCTCAGGTAAT AACCCGCATGACAACTCAAGGCAGAGGTCGCCCGCTGAACTCTTGGGTTTCAGGCCAAAAAACGTTACGCAGGAA ATGATCACAACTATATCCAACATGTTTCCTGATATCCCCGCCGATAACATTCGATATGACCTGTTGCGGTCGGGG AGTATTGAGGTTACTACGAACAAAATCCTGGAAAAAGGTTATCTTGACGCGCCGCCCGCTGCGTATTACACCCTT TATCCACGTACCAACAGGGCTCCACAGCCTCACGCCCACCCTCATGACCGGCGCTCTGCATCTCACGCCGAGAGG AAAGCAGCCGAGAAAAAAGAAACATTGATTAGTCGGTTTAAACTTGAACAACGAATAGGAAGTGAGAAGGGGGAA ATTGTGAATGAGGAAGATGTTGGAGGGAAAGCTGTTTGGGAGGATACGGCGGAGAAAAGGGAAGCAAGTTTGAAG GAGAGGAAGGCTAAGATGATTTTGGCTGCGAGAGAGCGTTTTTTGGCCCAGCAAGAAAAGTCGCGTTTGGCTTCC GGTTCGGGTTCCAGCTCTGGTATTCAGTCATAA
Transcript	>Agabi119p4|774200 ATGGGTGAAATCGTCAATGTCCTCGTCGCCTTTGCGGTTATTGTCTTCCTCTTTCGATGGGCGACCTCAGGTAAT AACCCGCATGACAACTCAAGGCAGAGGTCGCCCGCTGAACTCTTGGGTTTCAGGCCAAAAAACGTTACGCAGGAA ATGATCACAACTATATCCAACATGTTTCCTGATATCCCCGCCGATAACATTCGATATGACCTGTTGCGGTCGGGG AGTATTGAGGTTACTACGAACAAAATCCTGGAAAAAGGTTATCTTGACGCGCCGCCCGCTGCGTATTACACCCTT TATCCACGTACCAACAGGGCTCCACAGCCTCACGCCCACCCTCATGACCGGCGCTCTGCATCTCACGCCGAGAGG AAAGCAGCCGAGAAAAAAGAAACATTGATTAGTCGGTTTAAACTTGAACAACGAATAGGAAGTGAGAAGGGGGAA ATTGTGAATGAGGAAGATGTTGGAGGGAAAGCTGTTTGGGAGGATACGGCGGAGAAAAGGGAAGCAAGTTTGAAG GAGAGGAAGGCTAAGATGATTTTGGCTGCGAGAGAGCGTTTTTTGGCCCAGCAAGAAAAGTCGCGTTTGGCTTCC GGTTCGGGTTCCAGCTCTGGTATTCAGTCATAA
Gene	>Agabi119p4|774200 ATGGGTGAAATCGTCAATGTCCTCGTCGCCTTTGCGGTTATTGTCTTCCTCTTTCGATGGGCGACCTCAGGTTTC TCGTTTGGCATCATTGTCTGTCTCTCTGGCGCTGATAGGATTCTTTATACAGGTAATAACCCGCATGACAACTCA AGGCAGAGGTCGCCCGCTGAACTCTTGGGTTTCAGGCCAAAAAACGTTACGCAGGAAATGGTACGTTTTAATTTC GGGGGATTGTGGATTACTCGGTGCTCCCAAGCACATATGCATCTCTTACTGTGGTCGTTTCTAATGTGTGCTATA GATCACAACTATATCCAACATGTTTCCTGATATCCCCGCGTATGTCCTTCTTGGCCTCCTTGAAATTATTGTTCC TTCCCTGAGCGCTCACGGCGAAAATTTCTAGCGATAACATTCGATATGACCTGTTGCGGTCGGGGAGTATTGAGG TTACTACGAACAAAATCCTGGAAAAAGGTTATCTTGACGCGGTACGTCATTTTATCATTCCTGTTTCTTCCTTGT TGAAACTACTCGGGTTTCTGTTACGGTTTTTCTGACAAAATCTTGTTCTTTCTTTTTGCTTTTTTCTTTTACCTC TAGCCGCCCGCTGCGTATTACACCCTTTATCCACGTACCAACAGGGCTCCACAGCCTCACGCCCACCCTCATGAC CGGCGCTCTGCATCTCACGCCGAGAGGAAAGCAGCCGAGAAAAAAGAAACATTGATTAGTCGGTTTAAACTTGAA CAACGAATAGGAAGTGAGAAGGGGGAAATTGTGAATGAGGAAGATGTTGGAGGGAAAGCTGTTTGGGAGGATACG GCGGAGAAAAGGGAAGCAAGTTTGAAGGAGAGGAAGGCTAAGATGATTTTGGCTGCGAGAGAGTGAGTGATAATT ATTATTTTCCATTTTTACTGATTGAAGGTTTGCGTGAATTTGATAGGCGTTTTTTGGCCCAGCAAGAAAAGTCGC GTTTGGCTTCCGGTTCGGGTTCCAGCTCTGGTATTCAGTCATAA