Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|774150
Gene name
Locationscaffold_12:936048..937866
Strand-
Gene length (bp)1818
Transcript length (bp)1446
Coding sequence length (bp)1446
Protein length (aa) 482

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02353 CMAS Mycolic acid cyclopropane synthetase 2.0E-65 171 448
PF08241 Methyltransf_11 Methyltransferase domain 9.4E-10 239 339
PF13649 Methyltransf_25 Methyltransferase domain 1.4E-09 239 335
PF13489 Methyltransf_23 Methyltransferase domain 8.0E-08 218 347
PF08123 DOT1 Histone methylation protein DOT1 7.3E-06 216 275

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|C4R7Z3|C9MT_PICPG Sphingolipid C9-methyltransferase OS=Komagataella pastoris (strain GS115 / ATCC 20864) GN=PAS_chr4_0465 PE=1 SV=1 2 481 0.0E+00
sp|I1RNL0|C9MT2_GIBZE Sphingolipid C9-methyltransferase 2 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=MT2 PE=3 SV=1 5 474 0.0E+00
sp|I1RJD6|C9MT1_GIBZE Sphingolipid C9-methyltransferase 1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=MT1 PE=3 SV=1 5 470 9.0E-180
sp|Q5APD4|C9MT_CANAL Sphingolipid C9-methyltransferase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=MTS1 PE=1 SV=1 5 470 1.0E-172
sp|O69687|FAMT_MYCTU Probable fatty acid methyltransferase Rv3720 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv3720 PE=1 SV=4 171 436 5.0E-42
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Swissprot ID Swissprot Description Start End E-value
sp|C4R7Z3|C9MT_PICPG Sphingolipid C9-methyltransferase OS=Komagataella pastoris (strain GS115 / ATCC 20864) GN=PAS_chr4_0465 PE=1 SV=1 2 481 0.0E+00
sp|I1RNL0|C9MT2_GIBZE Sphingolipid C9-methyltransferase 2 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=MT2 PE=3 SV=1 5 474 0.0E+00
sp|I1RJD6|C9MT1_GIBZE Sphingolipid C9-methyltransferase 1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=MT1 PE=3 SV=1 5 470 9.0E-180
sp|Q5APD4|C9MT_CANAL Sphingolipid C9-methyltransferase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=MTS1 PE=1 SV=1 5 470 1.0E-172
sp|O69687|FAMT_MYCTU Probable fatty acid methyltransferase Rv3720 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv3720 PE=1 SV=4 171 436 5.0E-42
sp|P31049|FAMT_PSEPU Probable fatty acid methyltransferase OS=Pseudomonas putida PE=3 SV=1 119 473 1.0E-38
sp|P0A9H7|CFA_ECOLI Cyclopropane-fatty-acyl-phospholipid synthase OS=Escherichia coli (strain K12) GN=cfa PE=1 SV=2 181 460 6.0E-33
sp|P0A9H8|CFA_ECOL6 Cyclopropane-fatty-acyl-phospholipid synthase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=cfa PE=3 SV=2 181 460 6.0E-33
sp|Q6MX39|UMAA_MYCTU S-adenosylmethionine-dependent methyltransferase UmaA OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=umaA PE=1 SV=1 178 452 3.0E-30
sp|A5U030|MMAA1_MYCTA Mycolic acid methyltransferase MmaA1 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=mmaA1 PE=1 SV=1 178 452 5.0E-30
sp|P0A5Q1|MMAA1_MYCBO Mycolic acid methyltransferase MmaA1 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=cmaD PE=3 SV=1 178 452 5.0E-30
sp|P9WPB0|MMAA1_MYCTO Mycolic acid methyltransferase MmaA1 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=mmaA1 PE=3 SV=1 178 452 5.0E-30
sp|P9WPB1|MMAA1_MYCTU Mycolic acid methyltransferase MmaA1 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=mmaA1 PE=1 SV=1 178 452 5.0E-30
sp|P9WPB3|CMAS3_MYCTU Cyclopropane mycolic acid synthase 3 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=pcaA PE=1 SV=1 180 452 1.0E-29
sp|P9WPB2|CMAS3_MYCTO Cyclopropane mycolic acid synthase 3 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=pcaA PE=3 SV=1 180 452 1.0E-29
sp|P9WPB7|CMAS1_MYCTU Cyclopropane mycolic acid synthase 1 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=cmaA1 PE=1 SV=1 180 452 8.0E-28
sp|A5U866|CMAS1_MYCTA Cyclopropane mycolic acid synthase 1 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=cmaA1 PE=1 SV=1 180 452 8.0E-28
sp|P9WPB6|CMAS1_MYCTO Cyclopropane mycolic acid synthase 1 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=cmaA1 PE=3 SV=1 180 452 2.0E-27
sp|Q7U1J9|MMAA2_MYCBO Cyclopropane mycolic acid synthase MmaA2 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=cmaC PE=1 SV=1 178 452 3.0E-27
sp|A5U029|MMAA2_MYCTA Cyclopropane mycolic acid synthase MmaA2 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=mmaA2 PE=1 SV=1 178 452 3.0E-27
sp|Q79FX6|MMAA2_MYCTU Cyclopropane mycolic acid synthase MmaA2 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=mmaA2 PE=1 SV=1 178 452 3.0E-27
sp|Q79FX8|MMAA4_MYCTU Hydroxymycolate synthase MmaA4 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=mmaA4 PE=1 SV=1 169 431 8.0E-27
sp|A5U027|MMAA4_MYCTA Hydroxymycolate synthase MmaA4 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=mmaA4 PE=1 SV=1 169 431 8.0E-27
sp|Q49807|CMAS2_MYCLE Cyclopropane mycolic acid synthase 2 OS=Mycobacterium leprae (strain TN) GN=cmaA2 PE=3 SV=1 178 452 1.0E-26
sp|P9WPB5|CMAS2_MYCTU Cyclopropane mycolic acid synthase 2 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=cmaA2 PE=1 SV=1 178 452 2.0E-26
sp|P9WPB4|CMAS2_MYCTO Cyclopropane mycolic acid synthase 2 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=cmaA2 PE=3 SV=1 178 452 2.0E-26
sp|P0A5P1|CMAS2_MYCBO Cyclopropane mycolic acid synthase 2 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=cmaA2 PE=3 SV=1 178 452 2.0E-26
sp|A5U028|MMAA3_MYCTA Methoxy mycolic acid synthase MmaA3 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=mmaA3 PE=1 SV=1 178 452 3.0E-26
sp|Q7U1K0|MMAA3_MYCBO Methoxy mycolic acid synthase MmaA3 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=cmaB PE=1 SV=1 178 452 3.0E-26
sp|P0CH91|MMAA3_MYCTU Methoxy mycolic acid synthase MmaA3 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=mmaA3 PE=1 SV=1 178 452 3.0E-26
sp|Q7U1K1|MMAA4_MYCBO Hydroxymycolate synthase MmaA4 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=cmaA PE=1 SV=1 169 431 3.0E-26
sp|O53732|UFAA1_MYCTU Tuberculostearic acid methyltransferase UfaA1 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=ufaA1 PE=1 SV=3 153 450 9.0E-21
sp|C3SBW0|PNMT_THLFG Pavine N-methyltransferase OS=Thalictrum flavum subsp. glaucum PE=1 SV=1 210 442 1.0E-10
sp|Q7XB08|CNMT_PAPSO (S)-coclaurine N-methyltransferase OS=Papaver somniferum GN=CNMT PE=1 SV=1 196 411 2.0E-09
sp|Q5C9L6|CNMT_THLFG (S)-coclaurine N-methyltransferase OS=Thalictrum flavum subsp. glaucum PE=1 SV=1 214 415 2.0E-09
sp|C3SBU4|TNMT2_PAPBR Probable (S)-tetrahydroprotoberberine N-methyltransferase 2 OS=Papaver bracteatum PE=2 SV=1 203 415 4.0E-09
sp|C3SBS8|TNMT_ESCCA (S)-tetrahydroprotoberberine N-methyltransferase OS=Eschscholzia californica PE=1 SV=1 209 365 2.0E-08
sp|C3SBU5|TNMT1_PAPBR (S)-tetrahydroprotoberberine N-methyltransferase 1 OS=Papaver bracteatum PE=1 SV=1 214 415 2.0E-07
sp|Q108P1|TNMT_PAPSO (S)-tetrahydroprotoberberine N-methyltransferase OS=Papaver somniferum PE=1 SV=1 210 415 5.0E-07
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GO

GO Term Description Terminal node
GO:0018024 histone-lysine N-methyltransferase activity Yes
GO:0008168 methyltransferase activity Yes
GO:0016279 protein-lysine N-methyltransferase activity No
GO:0008757 S-adenosylmethionine-dependent methyltransferase activity No
GO:0140096 catalytic activity, acting on a protein No
GO:0003824 catalytic activity No
GO:0042054 histone methyltransferase activity No
GO:0016278 lysine N-methyltransferase activity No
GO:0008276 protein methyltransferase activity No
GO:0016740 transferase activity No
GO:0003674 molecular_function No
GO:0016741 transferase activity, transferring one-carbon groups No
GO:0008170 N-methyltransferase activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 33 0.5

Transmembrane Domains

Domain # Start End Length
1 30 52 22
2 59 81 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|774150
MSSSVRVTDYPAIKNAPLVGLAEGNGSFNNIHLAGLVLTVPYLLKWFLPLFNRGGFKTYLFLLVLSGVPTTVAYW
TVMSHIGSRRNEKVALPGKDIEEYITINDEDLKRTYKRKDKIPMQIFHDAYFDGKIDFNGDVLDIMEQRHDWAKF
NFTMELFKYVFTVLIPCVISHSQTQDEEQVRDHYDRGDDFYGWFLGPRMIYTSGIIIKPDAEESLEELQDNKLAV
VCSKLDLQPEDRLLDIGCGWGTLVAYAAKNYECDATGVTLAKNQAKFGTDRIEKNGVPASRARILCSDYRDIPAG
TTYTKIVSLEMAEHVGVRRYSQFLSQVYDLLDDDGLFVFQVAGIRPSWQYEDLIWGLFMNKYVFPGADASCSLGW
VINKLEGAGFEVKNIDVLGVHYSATIYRWYQNWVSNKEAVIQAYGERWYRIWAFFLAYSVIISRQGGASVFQITL
HKNLNAFHRVQGVKSHASIHVKLDKEPELIE*
Coding >Agabi119p4|774150
ATGTCGTCCTCTGTCCGTGTCACCGACTATCCTGCGATCAAGAACGCCCCCCTCGTCGGTCTCGCGGAGGGCAAT
GGCTCCTTCAACAACATCCACCTCGCCGGCCTCGTCCTCACCGTTCCTTACTTGCTCAAGTGGTTCCTTCCCTTA
TTTAACCGAGGCGGCTTCAAGACCTATCTCTTTCTCCTCGTCCTCTCCGGTGTCCCCACAACCGTCGCATATTGG
ACAGTTATGAGCCACATCGGTTCTCGCCGCAACGAAAAGGTCGCCCTTCCTGGCAAAGACATTGAAGAGTACATC
ACCATCAACGACGAAGACCTGAAGCGTACCTACAAGAGAAAAGACAAGATTCCCATGCAAATTTTCCATGACGCG
TACTTCGACGGGAAAATTGATTTCAACGGTGACGTTTTGGACATCATGGAGCAACGTCATGACTGGGCCAAGTTC
AACTTTACCATGGAGTTGTTCAAATACGTCTTCACAGTCCTCATTCCTTGCGTGATTTCCCACTCTCAAACGCAG
GACGAAGAACAAGTTCGTGACCACTATGACCGAGGTGATGACTTTTATGGTTGGTTCTTGGGTCCTCGCATGATC
TACACGTCGGGTATCATCATCAAGCCTGACGCTGAAGAATCTCTCGAGGAACTCCAGGACAACAAGCTTGCTGTC
GTTTGCAGCAAGCTTGATCTCCAACCTGAAGACCGTCTCCTCGACATTGGTTGTGGCTGGGGCACCCTCGTTGCT
TATGCCGCCAAGAATTATGAATGTGACGCAACTGGGGTTACGCTTGCTAAAAATCAGGCCAAGTTTGGGACGGAC
CGTATCGAGAAGAATGGTGTACCCGCTTCTCGCGCCCGGATCCTTTGTTCTGACTACCGCGATATCCCTGCTGGC
ACTACGTATACGAAAATTGTTAGCTTGGAAATGGCAGAGCACGTTGGTGTTCGACGTTACTCTCAATTCTTGAGT
CAAGTCTATGACTTGCTCGATGATGATGGTCTCTTCGTCTTCCAGGTTGCTGGTATTCGTCCTTCATGGCAATAT
GAGGACCTTATTTGGGGTCTTTTCATGAACAAATATGTCTTCCCTGGTGCTGATGCATCTTGTTCTCTTGGTTGG
GTCATCAACAAGCTCGAGGGTGCCGGCTTTGAAGTCAAGAACATTGACGTCCTTGGTGTTCACTATTCTGCTACC
ATCTATCGCTGGTACCAGAACTGGGTTAGCAATAAGGAGGCTGTCATCCAGGCTTACGGCGAGAGGTGGTATAGG
ATCTGGGCGTTCTTCCTTGCGTACAGTGTCATCATCAGCCGACAAGGTGGTGCCTCGGTCTTCCAGATTACGCTT
CACAAAAACTTGAATGCCTTCCATCGCGTTCAGGGTGTCAAAAGTCATGCTTCCATCCACGTAAAGCTCGACAAG
GAGCCCGAACTTATTGAGTAA
Transcript >Agabi119p4|774150
ATGTCGTCCTCTGTCCGTGTCACCGACTATCCTGCGATCAAGAACGCCCCCCTCGTCGGTCTCGCGGAGGGCAAT
GGCTCCTTCAACAACATCCACCTCGCCGGCCTCGTCCTCACCGTTCCTTACTTGCTCAAGTGGTTCCTTCCCTTA
TTTAACCGAGGCGGCTTCAAGACCTATCTCTTTCTCCTCGTCCTCTCCGGTGTCCCCACAACCGTCGCATATTGG
ACAGTTATGAGCCACATCGGTTCTCGCCGCAACGAAAAGGTCGCCCTTCCTGGCAAAGACATTGAAGAGTACATC
ACCATCAACGACGAAGACCTGAAGCGTACCTACAAGAGAAAAGACAAGATTCCCATGCAAATTTTCCATGACGCG
TACTTCGACGGGAAAATTGATTTCAACGGTGACGTTTTGGACATCATGGAGCAACGTCATGACTGGGCCAAGTTC
AACTTTACCATGGAGTTGTTCAAATACGTCTTCACAGTCCTCATTCCTTGCGTGATTTCCCACTCTCAAACGCAG
GACGAAGAACAAGTTCGTGACCACTATGACCGAGGTGATGACTTTTATGGTTGGTTCTTGGGTCCTCGCATGATC
TACACGTCGGGTATCATCATCAAGCCTGACGCTGAAGAATCTCTCGAGGAACTCCAGGACAACAAGCTTGCTGTC
GTTTGCAGCAAGCTTGATCTCCAACCTGAAGACCGTCTCCTCGACATTGGTTGTGGCTGGGGCACCCTCGTTGCT
TATGCCGCCAAGAATTATGAATGTGACGCAACTGGGGTTACGCTTGCTAAAAATCAGGCCAAGTTTGGGACGGAC
CGTATCGAGAAGAATGGTGTACCCGCTTCTCGCGCCCGGATCCTTTGTTCTGACTACCGCGATATCCCTGCTGGC
ACTACGTATACGAAAATTGTTAGCTTGGAAATGGCAGAGCACGTTGGTGTTCGACGTTACTCTCAATTCTTGAGT
CAAGTCTATGACTTGCTCGATGATGATGGTCTCTTCGTCTTCCAGGTTGCTGGTATTCGTCCTTCATGGCAATAT
GAGGACCTTATTTGGGGTCTTTTCATGAACAAATATGTCTTCCCTGGTGCTGATGCATCTTGTTCTCTTGGTTGG
GTCATCAACAAGCTCGAGGGTGCCGGCTTTGAAGTCAAGAACATTGACGTCCTTGGTGTTCACTATTCTGCTACC
ATCTATCGCTGGTACCAGAACTGGGTTAGCAATAAGGAGGCTGTCATCCAGGCTTACGGCGAGAGGTGGTATAGG
ATCTGGGCGTTCTTCCTTGCGTACAGTGTCATCATCAGCCGACAAGGTGGTGCCTCGGTCTTCCAGATTACGCTT
CACAAAAACTTGAATGCCTTCCATCGCGTTCAGGGTGTCAAAAGTCATGCTTCCATCCACGTAAAGCTCGACAAG
GAGCCCGAACTTATTGAGTAA
Gene >Agabi119p4|774150
ATGTCGTCCTCTGTCCGTGTCACCGACTATCCTGCGATCAAGAACGCCCCCCTCGTCGGTCTCGCGGAGGGCAAT
GGCTCCTTCAACAACATCCACCTCGCCGGCCTCGTCCTCACCGTTCCTTACTTGCTCAAGTGGTTCCTTCCCTTA
TTTAACCGAGGCGGCTTCAAGACCTATCTCTTTCTCCTCGTCCTCTCCGGTGTCCCCACAACCGTCGCATATTGG
ACAGTTATGAGCCACATCGGTTCTCGCCGCAACGAAAAGGTCGCCCTTCCTGGCAAAGACATTGAAGAGTACATC
ACCATCAACGACGAAGACCTGAAGCGTACCTACAAGAGAAAAGACAAGATTCCCATGCAAATTTTCCATGACGCG
TACTTCGACGGGAAAATTGATTTCAACGGTTAGCAGCGCGTCTACATGTCTTCTCTTCAAGTCACTGATGTGTGC
AACAGGTGACGTTTTGGACATCATGGAGCAACGTCATGACTGGGCCAAGTTCAACTTTACCATGGAGTTGTTCAA
ATACGTCTTCACAGTCCTCATTCCTTGCGTGATTTCCCACTCTCAAACGCAGGACGAAGAACAAGTTCGTGACCA
CTATGACCGTATGTCCCATGCACTCGCCTGTTCGGTCTCTTCATTGACGTCTATCGCAGGAGGTGATGACTTTTA
TGGTTGGTTCTTGGGTCCTCGCATGATCTACACGTCGGGTATCATCATCAAGCCTGACGCTGAAGAATCTCTCGA
GGAACTCCAGGACAACAAGCTTGCTGTCGTTTGCAGCAAGCTTGATCTCCAACCTGAAGACCGTCTCCTCGACAT
TGGTTGTGGCTGGGGCACCCTCGTTGCTTATGCCGCCAAGAATTATGAATGTGACGCAACTGGGGTTACGCTTGC
TAAAAATCAGGCCAAGTTTGGGACGGACCGTATCGAGAAGAATGGTGTACGTCTTTTATTGAGTAAACCATGCGT
AGATACGCTTACTATGTTTCCTCAGGTACCCGCTTCTCGCGCCCGGATCCTTTGTTCTGACTACCGCGATATCCC
TGCTGGCACTACGTATACGAAAATTGTTAGCTTGGAAATGGCAGAGGTATGTAATATGTCGTTTGGTTATTTTTA
GCATCTGACCCTGGTCGCTAGCACGTTGGTGTTCGACGTTACTCTCAATTCTTGAGTCAAGTCTATGACTTGCTC
GATGATGATGGTCTCTTCGTCTTCCAGGTTGCTGGTATTCGTCCTTCATGGCAATATGAGGACCTTATTTGGTAT
GCCATTGATTCGATCCTCATTTTTACCGCAATCGTTAAACATCGTCCCAAGGGGTCTTTTCATGAACAAATATGT
CTTCCCTGGTGCTGATGCATCTTGTTCTCTTGGTTGGGTCATCAACAAGGTATGCTAGTTGCCCGTGTCCAATTG
CTCTTTGATTAACGTATCGTGTAGCTCGAGGGTGCCGGCTTTGAAGTCAAGAACATTGACGTCCTTGGTGTTCAC
TATTCTGCTACCATCTATCGCTGGTACCAGAACTGGGTTAGCAATAAGGAGGCTGTCATCCAGGCTTACGGCGAG
AGGTGGTATAGGATCTGGGCGTTCTTCCTTGCGTACAGTGTCATCATCAGCCGACAAGGTGGTGCCTCGGTCTTC
CAGATTACGCTTCACAAAAACTTGAATGCCTTCCATCGCGTTCAGGGTGTCAAAAGTCATGCTTCCATCCACGTA
AAGCTCGACAAGGAGCCCGAGTAAGTTCAATTATGTCAGTCTATGCTGGCCCTTTCTCAACAACCTCTTTTGTTC
GACAGACTTATTGAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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