Fungal Genomics

General Properties

Protein ID	Agabi119p4|768300
Gene name
Location	scaffold_12:369930..371341
Strand	-
Gene length (bp)	1411
Transcript length (bp)	1104
Coding sequence length (bp)	1104
Protein length (aa)	368

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF07470	Glyco_hydro_88	Glycosyl Hydrolase Family 88	5.0E-59	51	361

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp|O34559|URHG2_BACSU	Unsaturated rhamnogalacturonyl hydrolase YteR OS=Bacillus subtilis (strain 168) GN=yteR PE=1 SV=1	54	342	3.0E-46
sp|P0A3U7|PIC1_RHIRD	24.9 kDa protein in picA locus OS=Rhizobium radiobacter PE=2 SV=1	210	366	5.0E-15
sp|P0A3U6|PIC1_AGRFC	Protein Atu3128 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) GN=Atu3128 PE=3 SV=1	210	366	5.0E-15
sp|O31521|URHG1_BACSU	Unsaturated rhamnogalacturonyl hydrolase YesR OS=Bacillus subtilis (strain 168) GN=yesR PE=1 SV=1	61	338	3.0E-11

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

SignalP signal predicted	Location	Score
Yes	1 - 22	0.999749

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

CAZyme category	E-value	Start	End
GH105	4.4E-79	50	355

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	9151
Change Orthofinder run	5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|515100
Agaricus bisporus var bisporus H97	AgabiH97|029430
Agaricus bisporus var burnettii H119p4	Agabi119p4|768300 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|768300 MVFSSSSFTLLTLFIVISTVCARPQSYAIWAADSGIQRQQGNGLGGDGNPDVSYEHGEFQWGLRQLYERTGEEKY FEYIKNGVDNIVFGNGTVHGNYRLSDFSLDPVRTGPSFLYLLGKTGERKYQIAADIFKSQLDSHPRTAQGQFWHK LRYPNQGWLDGIYMGDIFYADYTKRFQPDNTTAWDDIAKQFTLMYQNALQNATAPNNLHLLYHGYDFSHQKVWAS PDRGHSPEVWDRALGWFSMALVDILETFPQDHPGYQSILSILQDVVPHIRDAADPSTGVWWLVMTQPGREKNYFE SSGGAMFVYSMLKSLRLGFVKDTEDGSIARAAKKAYGYMTENWVVEKQDGTMDWLNTVIVRGLQIFF*
Coding	>Agabi119p4|768300 ATGGTTTTCTCATCATCGAGTTTTACACTGCTCACACTTTTCATAGTCATATCCACTGTTTGTGCTCGTCCACAG TCTTATGCCATATGGGCAGCCGACTCGGGTATACAGCGACAACAAGGAAATGGTCTTGGTGGGGATGGGAATCCT GATGTATCTTATGAGCATGGAGAGTTTCAGTGGGGGTTGAGACAGCTTTATGAAAGGACGGGGGAGGAGAAGTAT TTTGAGTATATAAAAAACGGGGTGGATAATATTGTTTTTGGGAACGGGACTGTGCATGGGAATTATAGGTTGAGC GATTTTAGTCTTGACCCGGTAAGAACCGGTCCTTCGTTCCTTTATCTTCTCGGAAAAACGGGTGAAAGGAAATAT CAAATCGCTGCGGATATATTCAAATCCCAACTGGATTCTCATCCCCGTACGGCTCAAGGACAGTTTTGGCATAAA CTCAGATATCCGAATCAAGGTTGGCTTGATGGGATATATATGGGTGATATTTTCTATGCGGATTATACGAAACGA TTCCAACCAGATAATACTACAGCTTGGGATGATATCGCGAAACAATTCACTTTGATGTATCAAAACGCCCTTCAA AATGCTACTGCACCCAATAACCTCCATCTCTTATATCACGGATACGATTTTTCTCATCAAAAAGTATGGGCATCC CCAGATAGAGGTCATTCACCTGAGGTTTGGGATCGCGCTTTGGGATGGTTTTCAATGGCTCTCGTCGACATTCTC GAAACATTCCCACAAGATCACCCAGGATATCAATCTATCTTGTCAATTTTACAAGACGTTGTACCTCACATCCGA GATGCCGCGGACCCTTCTACTGGAGTTTGGTGGTTAGTGATGACTCAACCTGGGAGAGAGAAAAATTATTTTGAG AGTAGTGGGGGTGCGATGTTTGTTTATTCGATGTTGAAGAGTTTGAGGTTGGGTTTCGTGAAGGATACGGAGGAT GGGAGTATTGCTAGGGCGGCGAAGAAGGCGTATGGCTATATGACAGAGAATTGGGTTGTGGAGAAGCAGGATGGA ACTATGGACTGGTTGAATACCGTCATCGTGCGTGGTTTACAAATTTTCTTTTAG
Transcript	>Agabi119p4|768300 ATGGTTTTCTCATCATCGAGTTTTACACTGCTCACACTTTTCATAGTCATATCCACTGTTTGTGCTCGTCCACAG TCTTATGCCATATGGGCAGCCGACTCGGGTATACAGCGACAACAAGGAAATGGTCTTGGTGGGGATGGGAATCCT GATGTATCTTATGAGCATGGAGAGTTTCAGTGGGGGTTGAGACAGCTTTATGAAAGGACGGGGGAGGAGAAGTAT TTTGAGTATATAAAAAACGGGGTGGATAATATTGTTTTTGGGAACGGGACTGTGCATGGGAATTATAGGTTGAGC GATTTTAGTCTTGACCCGGTAAGAACCGGTCCTTCGTTCCTTTATCTTCTCGGAAAAACGGGTGAAAGGAAATAT CAAATCGCTGCGGATATATTCAAATCCCAACTGGATTCTCATCCCCGTACGGCTCAAGGACAGTTTTGGCATAAA CTCAGATATCCGAATCAAGGTTGGCTTGATGGGATATATATGGGTGATATTTTCTATGCGGATTATACGAAACGA TTCCAACCAGATAATACTACAGCTTGGGATGATATCGCGAAACAATTCACTTTGATGTATCAAAACGCCCTTCAA AATGCTACTGCACCCAATAACCTCCATCTCTTATATCACGGATACGATTTTTCTCATCAAAAAGTATGGGCATCC CCAGATAGAGGTCATTCACCTGAGGTTTGGGATCGCGCTTTGGGATGGTTTTCAATGGCTCTCGTCGACATTCTC GAAACATTCCCACAAGATCACCCAGGATATCAATCTATCTTGTCAATTTTACAAGACGTTGTACCTCACATCCGA GATGCCGCGGACCCTTCTACTGGAGTTTGGTGGTTAGTGATGACTCAACCTGGGAGAGAGAAAAATTATTTTGAG AGTAGTGGGGGTGCGATGTTTGTTTATTCGATGTTGAAGAGTTTGAGGTTGGGTTTCGTGAAGGATACGGAGGAT GGGAGTATTGCTAGGGCGGCGAAGAAGGCGTATGGCTATATGACAGAGAATTGGGTTGTGGAGAAGCAGGATGGA ACTATGGACTGGTTGAATACCGTCATCGTGCGTGGTTTACAAATTTTCTTTTAG
Gene	>Agabi119p4|768300 ATGGTTTTCTCATCATCGAGTTTTACACTGCTCACACTTTTCATAGTCATATCCACTGTTTGTGCTCGTCCACAG TCTTATGCCATATGGGCAGCCGACTCGGGTATACAGCGACAACAAGGAAATGGTCTTGGTGGGGATGGGAATCCT GATGTATCTTATGAGCATGGAGAGTTTCAGTGGGGGTTGAGACAGCTTTATGAAAGGACGGGGGAGGAGAAGTAT TTTGAGTATATAAAAAACGGGGTGGATAATATTGTTTTTGGGAACGGGACTGTGCATGGGAATTATAGGTGTGTT TTTTAGCTTGTCGGAGGAAGATTTAGTTGCTTTTTTTTTTACTTGGTGTTTAGGTTGAGCGATTTTAGTCTTGAC CCGGTAAGGTGAGCCTGGTTTATATGCGAATGTTTTTTTTTCGAATACCGAACTCATTTGACTTATAGAACCGGT CCTTCGTTCCTTTATCTGTAAGCCATTTTCATAGCCCTTCCTATCCTTTGTATAGGGCTCAAAGTCCTTTTTCTT TCTTTTCTTTTCTTTTGTAGTCTCGGAAAAACGGGTGAAAGGAAATATCAAATCGCTGCGGATATATTCAAATCC CAACTGGATTCTCATCCCCGTACGGCTCAAGGACAGTTTTGGCATAAACTCAGATATCCGAATCAAGGTGGGCAT TTGAGAAGAAAGGAAAAGAAAAGGATTAACTGGCTTTTTTTTTGATTATAGGTTGGCTTGATGGGATATATATGG GTGATATTTTCTATGCGGATTATACGAAACGATTCCAACCAGATAATACTACAGCTTGGGGTACGAACTTCTTTC TTTTTTTTATACCTTTCTTTTAAAGTGCGAAATAGATGATATCGCGAAACAATTCACTTTGATGTATCAAAACGC CCTTCAAAATGCTACTGCACCCAATAACCTCCATCTCTTATATCACGGATACGATTTTTCTCATCAAAAAGTATG GGCATCCCCAGATAGAGGTCATTCACCTGAGGTTTGGGATCGCGCTTTGGGATGGTTTTCAATGGCTCTCGTCGA CATTCTCGAAACATTCCCACAAGATCACCCAGGATATCAATCTATCTTGTCAATTTTACAAGACGTTGTACCTCA CATCCGAGATGCCGCGGACCCTTCTACTGGAGTTTGGTGGTTAGTGATGACTCAACCTGGGAGAGAGAAAAATTA TTTTGAGAGTAGTGGGGGTGCGATGTTTGTTTATTCGATGTTGAAGAGTTTGAGGTTGGGTTTCGTGAAGGATAC GGAGGATGGGAGTATTGCTAGGGCGGCGAAGAAGGCGTATGGCTATATGACAGAGAATTGGGTTGTGGAGAAGCA GGATGGAACTATGGACTGGTTGAATACCGTCATCGTGCGTGGTTTACAAATTTTCTTTTAG