© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|767200 |
| Gene name | |
| Location | scaffold_12:260119..263089 |
| Strand | - |
| Gene length (bp) | 2970 |
| Transcript length (bp) | 1872 |
| Coding sequence length (bp) | 1872 |
| Protein length (aa) | 624 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00498 | FHA | FHA domain | 3.3E-13 | 213 | 293 |
| PF17123 | zf-RING_11 | RING-like zinc finger | 1.2E-11 | 362 | 390 |
| PF13639 | zf-RING_2 | Ring finger domain | 3.4E-08 | 362 | 407 |
| PF00097 | zf-C3HC4 | Zinc finger, C3HC4 type (RING finger) | 2.1E-04 | 363 | 406 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q10322|DMA1_SCHPO | Probable E3 ubiquitin-protein ligase dma1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dma1 PE=1 SV=1 | 154 | 417 | 2.0E-57 |
| sp|P38823|DMA1_YEAST | E3 ubiquitin-protein ligase DMA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DMA1 PE=1 SV=1 | 180 | 413 | 2.0E-51 |
| sp|P53924|DMA2_YEAST | E3 ubiquitin-protein ligase DMA2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DMA2 PE=1 SV=1 | 180 | 413 | 3.0E-50 |
| sp|A6ZRW7|DMA2_YEAS7 | E3 ubiquitin-protein ligase DMA2 OS=Saccharomyces cerevisiae (strain YJM789) GN=DMA2 PE=3 SV=1 | 180 | 413 | 4.0E-50 |
| sp|Q28623|SLMAP_RABIT | Sarcolemmal membrane-associated protein OS=Oryctolagus cuniculus GN=SLMAP PE=1 SV=2 | 205 | 303 | 2.0E-13 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q10322|DMA1_SCHPO | Probable E3 ubiquitin-protein ligase dma1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dma1 PE=1 SV=1 | 154 | 417 | 2.0E-57 |
| sp|P38823|DMA1_YEAST | E3 ubiquitin-protein ligase DMA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DMA1 PE=1 SV=1 | 180 | 413 | 2.0E-51 |
| sp|P53924|DMA2_YEAST | E3 ubiquitin-protein ligase DMA2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DMA2 PE=1 SV=1 | 180 | 413 | 3.0E-50 |
| sp|A6ZRW7|DMA2_YEAS7 | E3 ubiquitin-protein ligase DMA2 OS=Saccharomyces cerevisiae (strain YJM789) GN=DMA2 PE=3 SV=1 | 180 | 413 | 4.0E-50 |
| sp|Q28623|SLMAP_RABIT | Sarcolemmal membrane-associated protein OS=Oryctolagus cuniculus GN=SLMAP PE=1 SV=2 | 205 | 303 | 2.0E-13 |
| sp|Q14BN4|SLMAP_HUMAN | Sarcolemmal membrane-associated protein OS=Homo sapiens GN=SLMAP PE=1 SV=1 | 205 | 303 | 3.0E-13 |
| sp|P0C219|SLMAP_RAT | Sarcolemmal membrane-associated protein OS=Rattus norvegicus GN=Slmap PE=1 SV=1 | 205 | 303 | 1.0E-12 |
| sp|O74388|YNVD_SCHPO | Uncharacterized protein C3H7.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC3H7.13 PE=1 SV=1 | 209 | 313 | 1.0E-12 |
| sp|Q3URD3|SLMAP_MOUSE | Sarcolemmal membrane-associated protein OS=Mus musculus GN=Slmap PE=1 SV=2 | 205 | 303 | 1.0E-12 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005515 | protein binding | Yes |
| GO:0046872 | metal ion binding | Yes |
| GO:0043169 | cation binding | No |
| GO:0043167 | ion binding | No |
| GO:0005488 | binding | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|767200 MEPESPPSRTTILSSLLRGRPRNSSQSHANAADNHNHELSPPPPLSPSPAPLGSRNRRTQAQAAAPATAAQMQPS TSQPQQSAGLAISQMLRRRRSAGNVQQQQSQNQNSNQAQHSGHAPPHIMSQTAQTGLALAGFNVESSQTASNPTS HGPQSTQGPSAPQAAAAHSQSNNATASHRIRLVPQLDSRRSLRFDPIGRDLRESDPPLRIGRFTDRSGLGLSAIN SINSNKLAFRSKVVSRAHAEIWVDGGGKFFIRDTKSSSGTFLNHVRLSSAGTESRPFQIKDGDFLQLGVDYQGGT EDIYKSVKIRVEIGREWQAGVNAFNTNAFKNIKALTLPATASAAAQSTTNNSGRTKNLGIPDCCICLFSVTIRQA LFIAPCSHAFHYKCIKPVLESHHPAFSCPLCRTFADLEEDVEVDEGSWECGSDVEKLIGDSALPSPLPGGGRADD GDDRMDVDGIIHPNARASGEERPAVVPEEPEEDEGVVNPFQGGRPSVSPNPEGVLSGDDDSDMAQVTATVQRQES PLPPNSIPISNSITPPVQGNLGTGNNGSSAVWGSPGAESTSESARGDSPVLVNVIGGPGQGAQIAIAAGGGGDGD GDMGMGGDTVGIEGETVGGKRKR* |
| Coding | >Agabi119p4|767200 ATGGAACCAGAGTCTCCGCCGTCGCGCACAACAATCCTGAGCTCGTTGCTCAGAGGCAGACCCAGAAACTCGTCT CAGAGCCATGCAAATGCCGCAGACAACCACAACCACGAGCTTTCACCGCCACCACCACTGTCGCCCTCCCCAGCG CCTCTCGGCTCCCGCAACCGCCGTACTCAAGCACAGGCTGCAGCGCCCGCAACCGCGGCCCAGATGCAGCCCTCG ACCTCGCAGCCACAGCAGTCGGCGGGCCTGGCCATCTCCCAAATGCTTCGCCGCAGACGATCAGCGGGAAACGTC CAACAACAACAAAGTCAGAATCAAAATTCAAACCAGGCCCAGCATTCAGGCCATGCTCCTCCTCATATAATGTCC CAGACTGCGCAGACTGGGTTGGCCCTCGCAGGGTTCAACGTCGAATCATCTCAGACGGCGTCTAATCCGACATCA CACGGTCCACAGTCAACGCAAGGGCCCTCCGCGCCACAAGCAGCAGCAGCCCATTCTCAGTCGAATAACGCTACT GCATCCCACCGCATCCGACTCGTCCCCCAGCTCGACTCCCGCCGTTCTCTCCGCTTTGACCCTATCGGTCGAGAT CTTCGTGAAAGTGATCCTCCCCTCCGTATCGGTCGTTTCACAGATCGTTCCGGATTGGGTCTCTCTGCCATCAAC TCCATCAATTCCAACAAGCTTGCTTTCAGATCCAAAGTCGTCTCTAGAGCTCATGCGGAAATTTGGGTTGATGGT GGTGGCAAATTTTTTATCCGGGATACGAAGAGCAGTTCCGGGACTTTTCTGAATCATGTGAGGCTGAGTTCGGCG GGAACGGAAAGCAGACCATTTCAGATAAAGGATGGAGACTTTTTGCAGCTCGGCGTAGACTATCAAGGAGGAACA GAGGATATTTATAAAAGTGTGAAGATTAGAGTCGAGATTGGGAGGGAGTGGCAGGCGGGAGTGAATGCTTTCAAC ACGAATGCCTTCAAAAATATAAAGGCCCTTACTCTACCAGCGACTGCTTCCGCAGCGGCACAATCTACTACCAAT AACTCTGGAAGAACCAAAAATCTAGGTATTCCAGATTGTTGCATTTGTTTATTCAGTGTAACCATCCGTCAAGCA CTTTTCATTGCGCCATGCTCTCATGCTTTCCACTATAAATGCATAAAACCAGTTCTTGAATCTCATCATCCAGCA TTTTCATGCCCTTTATGTCGAACTTTCGCGGATCTAGAAGAGGACGTGGAAGTTGATGAAGGAAGTTGGGAATGT GGTAGTGACGTAGAGAAATTGATTGGGGATAGTGCTCTACCGTCTCCATTGCCAGGAGGTGGAAGAGCGGACGAC GGGGACGATAGAATGGATGTGGACGGGATCATTCATCCGAATGCAAGGGCATCCGGCGAGGAGAGACCTGCGGTT GTACCTGAAGAACCGGAGGAAGATGAAGGTGTTGTCAATCCTTTCCAAGGTGGCAGGCCATCAGTGTCACCCAAT CCCGAAGGTGTACTCTCTGGTGATGACGATTCTGATATGGCACAAGTAACAGCGACAGTTCAACGTCAAGAATCT CCACTTCCGCCCAACAGTATTCCCATCAGCAACTCGATTACCCCTCCAGTTCAGGGCAATCTCGGTACAGGAAAC AACGGTTCAAGCGCGGTATGGGGAAGTCCAGGAGCTGAATCAACAAGTGAGTCTGCGAGAGGTGATTCACCGGTT TTAGTGAATGTTATCGGTGGACCAGGTCAAGGGGCTCAGATTGCTATTGCTGCGGGTGGTGGTGGTGATGGAGAT GGTGATATGGGAATGGGGGGAGATACGGTTGGGATTGAGGGTGAGACTGTTGGTGGGAAACGGAAACGATGA |
| Transcript | >Agabi119p4|767200 ATGGAACCAGAGTCTCCGCCGTCGCGCACAACAATCCTGAGCTCGTTGCTCAGAGGCAGACCCAGAAACTCGTCT CAGAGCCATGCAAATGCCGCAGACAACCACAACCACGAGCTTTCACCGCCACCACCACTGTCGCCCTCCCCAGCG CCTCTCGGCTCCCGCAACCGCCGTACTCAAGCACAGGCTGCAGCGCCCGCAACCGCGGCCCAGATGCAGCCCTCG ACCTCGCAGCCACAGCAGTCGGCGGGCCTGGCCATCTCCCAAATGCTTCGCCGCAGACGATCAGCGGGAAACGTC CAACAACAACAAAGTCAGAATCAAAATTCAAACCAGGCCCAGCATTCAGGCCATGCTCCTCCTCATATAATGTCC CAGACTGCGCAGACTGGGTTGGCCCTCGCAGGGTTCAACGTCGAATCATCTCAGACGGCGTCTAATCCGACATCA CACGGTCCACAGTCAACGCAAGGGCCCTCCGCGCCACAAGCAGCAGCAGCCCATTCTCAGTCGAATAACGCTACT GCATCCCACCGCATCCGACTCGTCCCCCAGCTCGACTCCCGCCGTTCTCTCCGCTTTGACCCTATCGGTCGAGAT CTTCGTGAAAGTGATCCTCCCCTCCGTATCGGTCGTTTCACAGATCGTTCCGGATTGGGTCTCTCTGCCATCAAC TCCATCAATTCCAACAAGCTTGCTTTCAGATCCAAAGTCGTCTCTAGAGCTCATGCGGAAATTTGGGTTGATGGT GGTGGCAAATTTTTTATCCGGGATACGAAGAGCAGTTCCGGGACTTTTCTGAATCATGTGAGGCTGAGTTCGGCG GGAACGGAAAGCAGACCATTTCAGATAAAGGATGGAGACTTTTTGCAGCTCGGCGTAGACTATCAAGGAGGAACA GAGGATATTTATAAAAGTGTGAAGATTAGAGTCGAGATTGGGAGGGAGTGGCAGGCGGGAGTGAATGCTTTCAAC ACGAATGCCTTCAAAAATATAAAGGCCCTTACTCTACCAGCGACTGCTTCCGCAGCGGCACAATCTACTACCAAT AACTCTGGAAGAACCAAAAATCTAGGTATTCCAGATTGTTGCATTTGTTTATTCAGTGTAACCATCCGTCAAGCA CTTTTCATTGCGCCATGCTCTCATGCTTTCCACTATAAATGCATAAAACCAGTTCTTGAATCTCATCATCCAGCA TTTTCATGCCCTTTATGTCGAACTTTCGCGGATCTAGAAGAGGACGTGGAAGTTGATGAAGGAAGTTGGGAATGT GGTAGTGACGTAGAGAAATTGATTGGGGATAGTGCTCTACCGTCTCCATTGCCAGGAGGTGGAAGAGCGGACGAC GGGGACGATAGAATGGATGTGGACGGGATCATTCATCCGAATGCAAGGGCATCCGGCGAGGAGAGACCTGCGGTT GTACCTGAAGAACCGGAGGAAGATGAAGGTGTTGTCAATCCTTTCCAAGGTGGCAGGCCATCAGTGTCACCCAAT CCCGAAGGTGTACTCTCTGGTGATGACGATTCTGATATGGCACAAGTAACAGCGACAGTTCAACGTCAAGAATCT CCACTTCCGCCCAACAGTATTCCCATCAGCAACTCGATTACCCCTCCAGTTCAGGGCAATCTCGGTACAGGAAAC AACGGTTCAAGCGCGGTATGGGGAAGTCCAGGAGCTGAATCAACAAGTGAGTCTGCGAGAGGTGATTCACCGGTT TTAGTGAATGTTATCGGTGGACCAGGTCAAGGGGCTCAGATTGCTATTGCTGCGGGTGGTGGTGGTGATGGAGAT GGTGATATGGGAATGGGGGGAGATACGGTTGGGATTGAGGGTGAGACTGTTGGTGGGAAACGGAAACGATGA |
| Gene | >Agabi119p4|767200 ATGGAACCAGAGTCTCCGCCGTCGCGCACAACAATCCTGAGCTCGTTGCTCAGAGGCAGACCCAGAAACTCGTCT CAGAGCCATGCAAATGCCGCAGACAACCACAACCACGAGCTTTCACCGCCACCACCACTGTCGCCCTCCCCAGCG CCTCTCGGCTCCCGCAACCGCCGTACTCAAGCACAGGCTGCAGCGCCCGCAACCGCGGCCCAGATGCAGCCCTCG ACCTCGCAGCCACAGCAGTCGGCGGGCCTGGCCATCTCCCAAATGCTTCGCCGCAGACGATCAGCGGGAAACGTC CAACAACAACAAAGTCAGAATCAAAATTCAAACCAGGCCCAGCATTCAGGCCATGCTCCTCCTCATATAATGTCC CAGACTGCGCAGACTGGGTTGGCCCTCGCAGGGTTCAACGTCGAATCATCTCAGACGGCGTCTAATCCGACATCA CACGGTCCACAGTCAACGCAAGGGCCCTCCGCGCCACAAGCAGCAGCAGCCCATTCTCAGTCGAATAACGCTACT GCATCCCACCGCATCCGACTCGTCCCCCAGCTCGACTCCCGCCGTTCTCTCCGCTTTGACCCTATCGGTCGAGAT CTTCGTGAAAGTGATCCTCCCCTCCGTATCGGTCGTTTCACAGATCGTTCCGGATTGGGTCTCTCTGCCATCAAC TCCATCAATTCCAACAAGCTTGCTTTCAGATCCAAAGTCGTCTCTAGAGCTCATGCGGAAATTTGGGTTGATGGT GGTGGCAAATTTTTTATCCGGGATACGAAGAGCAGTTCCGGGACTTTTCTGAATCATGTGAGGCTGAGTTCGGCG GGAACGGAAAGCAGACCATTTCAGATAAAGGATGGAGACTTTTTGCAGCTCGGCGTAGACTATCAAGGAGGAACA GAGGATATTTATAAAAGTGTGAAGATTAGAGTCGAGATTGGGAGGGAGTGGCAGGCGGGAGTGAATGCTTTCAAG TTAGCCTTGATTCTCCTGAGGAGACACCGTCTAACCCTACTTCTAGCACGAATGCCTTCAAAAATATAAAGGCCC TTACTCTACCAGCGACTGCTTCCGCAGCGGCACAATCTACTACCAATAACTCTGGAAGAACCAAAAATCTAGGTA TTCCAGATTGTTGCATTTGTACGTCAAACATGACTTTCCTCACGACTTCCTTGTCCATTAAATTGACCTTGTACA GGTTTATTCAGTGTAACCATCCGTCAAGCACTTTTCATTGCGCCATGCTCTCATGCTTTCCACTATAAATGCATA AAACCAGTTCTTGAATCTCATCATCCAGCATTTTCATGCCCTTTATGTCGAACTTTCGCGGATCTAGAAGAGGAC GTGGAAGTTGATGAAGGAAGTTGGGAATGTGGTAGTGACGTAGAGAAATTGATTGGGGATAGTGCTCTACCGTCT CCATTGCCAGGAGGTGGAAGAGCGGACGACGGGGACGATAGAATGGATGTGGACGGGATCATTCATCCGAATGCA AGGGCATCCGGCGAGGAGAGACCTGCGGTTGTACCTGAAGAACCGGAGGAAGATGAAGGTGGTGAGTAGATGTTC TTGTCCACCTCTCAAATTTTTTCCCTTCTCCTTTTTCCGATTTGTTATCTTTTGTCTTTCCTGTCTTTCCTGGGC GTTACTGCGGCTCGCTTCCACTTTCATCCTTATACGAAGCGCTACTGCCCTGCTCCGCTTTCCCATTTGGGACAT CTTAGGCCCGTTATTGTGTCACCGTGCCCGCGCCGCACAGAATTGTGCCACACCTCGCATCTCTACCACTTCTTT GTGACCCTTTCCTGTTTTCTCCACTCTGTGCTCATTAGCTTCGGGAGGCATACCCGAACCTGTCTTTTTGTGGCA CTGATGATGGACACTGCCATCGTCGGTTGTTGGCGAGGATTAGCAAATGACATTCGATATGACGGGATAGCAATC AAATTAAATGTCACACTATCCATCACATGGAAGTTGATGGACGGCACCGCGGCATTGAGCATGGTTCTTGGACCT TCATTTCTTCTTCTGTTTACTTGGGTCTAGAGATGTTAAGAAGAGGCGCTCTGGGTTCTGTTCCAGAGTACCTCG GGCTCAAGGGTCCTATTGCTGTTTTCATTTCATCTTTCGTGCACGGCCTATGTCGTCACCCTTTTTCTTCGTTTT GATGCAAAGCGTGGTATGGCAGATTGTTTATATGGCAATTTGCGTGTGTTGTATCGGAGTCGGGTGGATACCTTG ATTTCTCATGTTTCTTTTGTTGACGGTGATGAAGTGGGTCTTTTTTTGGTTTATTTGGACTAGCGTTACACCGTG CTAGGCGTAATTCAGGATGGAGTTGATCGCCGTGTTATTCGTCTATTTTTGCTTCGGTGCGGGGGCACTCACCCG AAGTGTGGGGCGACTTCGGTTATCTATTTTCAGCACCTCGTTTTTTTCTACTTCTTGTTTTCTCCTTCGAATCGT CTCGTCTCGTTTTCATTTCGAACTTCATTATTATGACTCTTTGGAATTTTGTGTCACACATACTCACGACCTGTT AAAGTTGTCAATCCTTTCCAAGGTGGCAGGCCATCAGTGTCACCCAATCCCGAAGGTGTACTCTCTGGTGATGAC GATTCTGATATGGCACAAGTAACAGCGACAGTTCAACGTCAAGAATCTCCACTTCCGCCCAACAGTATTCCCATC AGCAACTCGATTACCCCTCCAGTTCAGGGCAATCTCGGTACAGGAAACAACGGTTCAAGCGCGGTATGGGGAAGT CCAGGAGCTGAATCAACAAGTGAGTCTGCGAGAGGTGATTCACCGGTTTTAGTGAATGTTATCGGTGGACCAGGT CAAGGGGCTCAGATTGCTATTGCTGCGGGTGGTGGTGGTGATGGAGATGGTGATATGGGAATGGGGGGAGATACG GTTGGGATTGAGGGTGAGACTGTTGGTGGGAAACGGAAACGATGA |