Fungal Genomics

General Properties

Protein ID	Agabi119p4|764000
Gene name
Location	scaffold_11:1828071..1829407
Strand	-
Gene length (bp)	1336
Transcript length (bp)	1284
Coding sequence length (bp)	1284
Protein length (aa)	428

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12937	F-box-like	F-box-like	2.4E-08	12	73

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0003674	molecular_function	No
GO:0005488	binding	No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	9124
Change Orthofinder run	5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|435600
Agaricus bisporus var burnettii H119p4	Agabi119p4|762700
Agaricus bisporus var burnettii H119p4	Agabi119p4|764000 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|764000 MNSRDPRSTTAINNLPNEVLLRIISETIAYALEPHEWLPCTPHHYQTRAVIKGVCRKWHHLMDSSPELWTSFTIG DPWGDQTKANIIMPSRGLLEIWQARSRDWPINIHLYSGPFAVQPDDSILMMTTLLPSTHRWSRLDLAFDERTAEA FLDLDHLGFGLKDIRASSFCCAKMNDQLLRAFGQCPNLERLVWIFAVGLPMTDQPTFHNALHLFPWERLCHISLE VSWTSTEFCSFFRSSTSAQSIQLNMQQHPADSSGIDLHPIITLPKLRYLGIESASSIYYYVGCLNLPGIQYLAII PKMAPLQDSSGWGAPPAAVANPLFQDFLERTMPSAQAMIIHGYPFSNLNAIRLFSNECLLRIPVLEIEVGESTAV AVIEYFELSGLLTGHHIEHQGPFMGWCYDSLRCCAVRDIFSSFYFNYHVWIH*
Coding	>Agabi119p4|764000 ATGAATTCCCGCGATCCTAGATCTACGACGGCCATCAACAACTTACCTAATGAGGTTCTTCTTCGCATCATATCC GAAACCATAGCATATGCTCTCGAGCCCCATGAGTGGCTTCCCTGCACGCCTCACCATTATCAAACCCGGGCCGTA ATCAAGGGCGTGTGCCGAAAATGGCACCACTTGATGGATTCCTCTCCCGAACTTTGGACATCTTTTACAATCGGT GATCCTTGGGGTGACCAAACCAAGGCAAATATTATCATGCCAAGCCGGGGACTTCTCGAAATATGGCAAGCTAGA TCTCGCGATTGGCCCATTAATATTCATCTCTACAGTGGACCATTTGCCGTCCAACCTGATGACAGTATCCTTATG ATGACAACATTGTTGCCATCAACCCATCGGTGGAGTCGGCTAGATTTGGCATTTGACGAAAGGACAGCCGAGGCA TTCCTTGATCTAGATCACCTTGGGTTTGGACTGAAGGATATCCGGGCATCATCTTTCTGTTGTGCCAAAATGAAT GATCAACTTCTGCGAGCGTTCGGGCAATGTCCTAATCTAGAAAGGTTGGTATGGATTTTCGCAGTCGGGTTACCC ATGACAGACCAACCAACCTTCCATAATGCTCTTCATCTCTTTCCATGGGAACGTCTCTGCCATATCTCTCTTGAG GTTTCGTGGACTTCGACTGAGTTCTGCTCATTCTTCCGCTCTTCCACTTCTGCCCAATCGATTCAACTAAACATG CAACAACATCCCGCTGACTCTTCTGGCATTGATCTGCATCCTATAATAACTTTACCCAAGCTCAGGTATCTCGGC ATTGAGTCTGCATCGAGCATATATTATTATGTTGGGTGTTTGAATCTCCCAGGCATCCAATACCTAGCGATCATC CCGAAAATGGCACCCTTGCAGGACTCATCTGGATGGGGAGCTCCACCCGCTGCTGTTGCCAACCCATTGTTTCAG GACTTTCTCGAGCGAACAATGCCATCAGCACAGGCCATGATTATCCATGGATACCCGTTTTCAAACTTGAATGCT ATTCGTTTATTCAGTAACGAGTGCTTGCTCCGCATACCTGTGTTGGAAATTGAAGTTGGAGAAAGTACTGCTGTT GCAGTTATTGAATACTTCGAGTTGAGTGGATTATTGACAGGTCACCACATAGAGCATCAAGGCCCATTTATGGGT TGGTGCTATGACAGCCTGAGGTGTTGTGCAGTTCGTGACATCTTTTCCTCATTCTATTTTAATTACCATGTCTGG ATCCATTAA
Transcript	>Agabi119p4|764000 ATGAATTCCCGCGATCCTAGATCTACGACGGCCATCAACAACTTACCTAATGAGGTTCTTCTTCGCATCATATCC GAAACCATAGCATATGCTCTCGAGCCCCATGAGTGGCTTCCCTGCACGCCTCACCATTATCAAACCCGGGCCGTA ATCAAGGGCGTGTGCCGAAAATGGCACCACTTGATGGATTCCTCTCCCGAACTTTGGACATCTTTTACAATCGGT GATCCTTGGGGTGACCAAACCAAGGCAAATATTATCATGCCAAGCCGGGGACTTCTCGAAATATGGCAAGCTAGA TCTCGCGATTGGCCCATTAATATTCATCTCTACAGTGGACCATTTGCCGTCCAACCTGATGACAGTATCCTTATG ATGACAACATTGTTGCCATCAACCCATCGGTGGAGTCGGCTAGATTTGGCATTTGACGAAAGGACAGCCGAGGCA TTCCTTGATCTAGATCACCTTGGGTTTGGACTGAAGGATATCCGGGCATCATCTTTCTGTTGTGCCAAAATGAAT GATCAACTTCTGCGAGCGTTCGGGCAATGTCCTAATCTAGAAAGGTTGGTATGGATTTTCGCAGTCGGGTTACCC ATGACAGACCAACCAACCTTCCATAATGCTCTTCATCTCTTTCCATGGGAACGTCTCTGCCATATCTCTCTTGAG GTTTCGTGGACTTCGACTGAGTTCTGCTCATTCTTCCGCTCTTCCACTTCTGCCCAATCGATTCAACTAAACATG CAACAACATCCCGCTGACTCTTCTGGCATTGATCTGCATCCTATAATAACTTTACCCAAGCTCAGGTATCTCGGC ATTGAGTCTGCATCGAGCATATATTATTATGTTGGGTGTTTGAATCTCCCAGGCATCCAATACCTAGCGATCATC CCGAAAATGGCACCCTTGCAGGACTCATCTGGATGGGGAGCTCCACCCGCTGCTGTTGCCAACCCATTGTTTCAG GACTTTCTCGAGCGAACAATGCCATCAGCACAGGCCATGATTATCCATGGATACCCGTTTTCAAACTTGAATGCT ATTCGTTTATTCAGTAACGAGTGCTTGCTCCGCATACCTGTGTTGGAAATTGAAGTTGGAGAAAGTACTGCTGTT GCAGTTATTGAATACTTCGAGTTGAGTGGATTATTGACAGGTCACCACATAGAGCATCAAGGCCCATTTATGGGT TGGTGCTATGACAGCCTGAGGTGTTGTGCAGTTCGTGACATCTTTTCCTCATTCTATTTTAATTACCATGTCTGG ATCCATTAA
Gene	>Agabi119p4|764000 ATGAATTCCCGCGATCCTAGATCTACGACGGCCATCAACAACTTACCTAATGAGGTTCTTCTTCGCATCATATCC GAAACCATAGCATATGCTCTCGAGCCCCATGAGTGGCTTCCCTGCACGCCTCACCATTATCAAACCCGGGCCGTA ATCAAGGGCGTGTGCCGAAAATGGCACCACTTGATGGATTCCTCTCCCGAACTTTGGACATCTTTTACAATCGGT GATCCTTGGGGTGACCAAACCAAGGCAAATATTATCATGCCAAGCCGGGGACTTCTCGAAATATGGCAAGCTAGA TCTCGCGATTGGCCCATTAATATTCATCTCTACAGTGGACCATTTGCCGTCCAACCTGATGACAGTATCCTTATG ATGACAACATTGTTGCCATCAACCCATCGGTGGAGTCGGCTAGATTTGGCATTTGACGAAAGGACAGCCGAGGCA TTCCTTGATCTAGATCACCTTGGGTTTGGACTGAAGGATATCCGGGCATCATCTTTCTGTTGTGCCAAAATGAAT GATCAACTTCTGCGAGCGTTCGGGCAATGTCCTAATCTAGAAAGGTTGGTATGGATTTTCGCAGTCGGGTTACCC ATGACAGACCAACCAACCTTCCATAATGCTCTTCATCTCTTTCCATGGGAACGTCTCTGCCATATCTCTCTTGAG GTTTCGTGGACTTCGACTGAGTTCTGCTCATTCTTCCGCTCTTCCACTTCTGCCCAATCGATTCAACTAAACATG CAACAACATCCCGCTGACTCTTCTGGCATTGATCTGCATCCTATAATAACTTTACCCAAGCTCAGGTATTTTAGC ACCTATTGTGACTTGGTTTTACTAGTACTGACTTGTTATCAGGTATCTCGGCATTGAGTCTGCATCGAGCATATA TTATTATGTTGGGTGTTTGAATCTCCCAGGCATCCAATACCTAGCGATCATCCCGAAAATGGCACCCTTGCAGGA CTCATCTGGATGGGGAGCTCCACCCGCTGCTGTTGCCAACCCATTGTTTCAGGACTTTCTCGAGCGAACAATGCC ATCAGCACAGGCCATGATTATCCATGGATACCCGTTTTCAAACTTGAATGCTATTCGTTTATTCAGTAACGAGTG CTTGCTCCGCATACCTGTGTTGGAAATTGAAGTTGGAGAAAGTACTGCTGTTGCAGTTATTGAATACTTCGAGTT GAGTGGATTATTGACAGGTCACCACATAGAGCATCAAGGCCCATTTATGGGTTGGTGCTATGACAGCCTGAGGTG TTGTGCAGTTCGTGACATCTTTTCCTCATTCTATTTTAATTACCATGTCTGGATCCATTAA