Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|763300
Gene name
Locationscaffold_11:1790171..1791594
Strand+
Gene length (bp)1423
Transcript length (bp)1317
Coding sequence length (bp)1317
Protein length (aa) 439

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12937 F-box-like F-box-like 1.3E-06 17 78

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID5
Orthogroup9125
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|476400
Agaricus bisporus var bisporus H97 AgabiH97|016740
Agaricus bisporus var burnettii H119p4 Agabi119p4|763300 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|763300
MNRRMSLQGGTSSWAGINDLPNEILLHILFKTISYTQELHEWFFCVHQHSTTRVTIMKVCRRWFQLTQGSPKFWT
SFTIGNPWGDPNKTERITPRRELLEIGQARSGNWPIYINLYHGSFSAYPQDSIFMMTALSPSINRWGRIDLALDE
GTASAFLDLHYSSTAGLKEIRACSFCSAETNNRLLEAFGLWPNLQKLVWIFATGLPTTDQPTFHNRLCCFPWKHL
RDISLEVSWTLTEFLAFFKSSTSAEIIRLNMRRHPTGSSDLPLHPIVNLPKLRYLGIESDSGVYCYVGYLNFPGI
KCIALSQKIVSLGNSWGTDPSPIPSTEFQQFLNRTARSAQGMIVHGYPFSAAEAVRLFSNEDMLCIPVIEIDVGE
AAAAAIVEHMKSNTSSTIPVVKRQGRLVGWCHDEASCRALNRILPSFDFKYHGWMHPYYPNHH*
Coding >Agabi119p4|763300
ATGAATAGAAGGATGAGTCTTCAAGGTGGAACGTCAAGCTGGGCAGGCATTAACGACTTGCCTAACGAAATTCTC
CTTCACATCCTATTCAAAACCATTTCATACACTCAAGAATTACATGAGTGGTTTTTCTGTGTACATCAACACTCT
ACAACCAGAGTAACAATCATGAAAGTATGTCGAAGATGGTTCCAATTGACGCAAGGGTCGCCCAAGTTTTGGACT
TCTTTCACAATTGGTAACCCTTGGGGTGACCCAAACAAAACAGAACGCATCACGCCGAGAAGGGAACTCCTTGAA
ATAGGTCAGGCAAGATCTGGCAATTGGCCCATCTATATCAATCTCTACCACGGATCCTTCTCAGCTTACCCCCAA
GACAGTATCTTCATGATGACAGCCCTGTCGCCTTCCATCAACAGGTGGGGTCGTATAGACTTGGCATTGGACGAA
GGCACGGCCAGCGCCTTTCTTGATTTGCATTATTCCTCGACGGCGGGACTGAAGGAGATTCGGGCATGTTCCTTC
TGTAGCGCAGAAACAAACAATCGGCTTTTGGAGGCGTTTGGACTATGGCCCAATTTGCAGAAGCTTGTGTGGATA
TTTGCGACCGGGTTGCCTACTACAGACCAGCCAACCTTCCATAATCGTCTTTGCTGCTTTCCATGGAAACACCTC
CGTGACATCTCGCTAGAGGTTTCGTGGACTCTGACGGAGTTCCTTGCGTTCTTCAAATCTTCCACTTCCGCCGAA
ATAATCCGGCTAAACATGCGACGGCATCCCACAGGTTCCTCCGACCTTCCCCTGCACCCAATAGTCAATTTGCCG
AAGCTGAGGTACCTCGGCATTGAGTCAGATTCAGGCGTGTACTGTTACGTCGGATACCTGAACTTCCCGGGCATC
AAATGCATCGCCCTCTCACAGAAAATTGTGTCTTTGGGAAACTCGTGGGGAACCGATCCGTCGCCTATTCCAAGT
ACGGAATTCCAGCAATTTCTCAATCGAACGGCACGATCTGCACAAGGTATGATCGTGCATGGATACCCGTTCTCA
GCTGCAGAAGCTGTTCGTTTGTTCAGCAACGAAGACATGCTCTGCATACCTGTGATAGAAATCGATGTTGGGGAA
GCGGCTGCGGCAGCCATTGTAGAACACATGAAGTCCAACACTTCTTCCACAATTCCCGTGGTCAAGCGTCAAGGC
CGATTGGTCGGTTGGTGCCATGACGAAGCGAGTTGTCGTGCACTTAACCGGATCTTGCCCTCGTTTGATTTCAAA
TATCACGGCTGGATGCATCCATACTATCCCAATCATCATTGA
Transcript >Agabi119p4|763300
ATGAATAGAAGGATGAGTCTTCAAGGTGGAACGTCAAGCTGGGCAGGCATTAACGACTTGCCTAACGAAATTCTC
CTTCACATCCTATTCAAAACCATTTCATACACTCAAGAATTACATGAGTGGTTTTTCTGTGTACATCAACACTCT
ACAACCAGAGTAACAATCATGAAAGTATGTCGAAGATGGTTCCAATTGACGCAAGGGTCGCCCAAGTTTTGGACT
TCTTTCACAATTGGTAACCCTTGGGGTGACCCAAACAAAACAGAACGCATCACGCCGAGAAGGGAACTCCTTGAA
ATAGGTCAGGCAAGATCTGGCAATTGGCCCATCTATATCAATCTCTACCACGGATCCTTCTCAGCTTACCCCCAA
GACAGTATCTTCATGATGACAGCCCTGTCGCCTTCCATCAACAGGTGGGGTCGTATAGACTTGGCATTGGACGAA
GGCACGGCCAGCGCCTTTCTTGATTTGCATTATTCCTCGACGGCGGGACTGAAGGAGATTCGGGCATGTTCCTTC
TGTAGCGCAGAAACAAACAATCGGCTTTTGGAGGCGTTTGGACTATGGCCCAATTTGCAGAAGCTTGTGTGGATA
TTTGCGACCGGGTTGCCTACTACAGACCAGCCAACCTTCCATAATCGTCTTTGCTGCTTTCCATGGAAACACCTC
CGTGACATCTCGCTAGAGGTTTCGTGGACTCTGACGGAGTTCCTTGCGTTCTTCAAATCTTCCACTTCCGCCGAA
ATAATCCGGCTAAACATGCGACGGCATCCCACAGGTTCCTCCGACCTTCCCCTGCACCCAATAGTCAATTTGCCG
AAGCTGAGGTACCTCGGCATTGAGTCAGATTCAGGCGTGTACTGTTACGTCGGATACCTGAACTTCCCGGGCATC
AAATGCATCGCCCTCTCACAGAAAATTGTGTCTTTGGGAAACTCGTGGGGAACCGATCCGTCGCCTATTCCAAGT
ACGGAATTCCAGCAATTTCTCAATCGAACGGCACGATCTGCACAAGGTATGATCGTGCATGGATACCCGTTCTCA
GCTGCAGAAGCTGTTCGTTTGTTCAGCAACGAAGACATGCTCTGCATACCTGTGATAGAAATCGATGTTGGGGAA
GCGGCTGCGGCAGCCATTGTAGAACACATGAAGTCCAACACTTCTTCCACAATTCCCGTGGTCAAGCGTCAAGGC
CGATTGGTCGGTTGGTGCCATGACGAAGCGAGTTGTCGTGCACTTAACCGGATCTTGCCCTCGTTTGATTTCAAA
TATCACGGCTGGATGCATCCATACTATCCCAATCATCATTGA
Gene >Agabi119p4|763300
ATGAATAGAAGGTTAATTTAAAGTTGAATGAATTCACCTATCAGGACCTGACCTTTCCGCATCTAGGATGAGTCT
TCAAGGTGGAACGTCAAGCTGGGCAGGCATTAACGACTTGCCTAACGAAATTCTCCTTCACATCCTATTCAAAAC
CATTTCATACACTCAAGAATTACATGAGTGGTTTTTCTGTGTACATCAACACTCTACAACCAGAGTAACAATCAT
GAAAGTATGTCGAAGATGGTTCCAATTGACGCAAGGGTCGCCCAAGTTTTGGACTTCTTTCACAATTGGTAACCC
TTGGGGTGACCCAAACAAAACAGAACGCATCACGCCGAGAAGGGAACTCCTTGAAATAGGTCAGGCAAGATCTGG
CAATTGGCCCATCTATATCAATCTCTACCACGGATCCTTCTCAGCTTACCCCCAAGACAGTATCTTCATGATGAC
AGCCCTGTCGCCTTCCATCAACAGGTGGGGTCGTATAGACTTGGCATTGGACGAAGGCACGGCCAGCGCCTTTCT
TGATTTGCATTATTCCTCGACGGCGGGACTGAAGGAGATTCGGGCATGTTCCTTCTGTAGCGCAGAAACAAACAA
TCGGCTTTTGGAGGCGTTTGGACTATGGCCCAATTTGCAGAAGCTTGTGTGGATATTTGCGACCGGGTTGCCTAC
TACAGACCAGCCAACCTTCCATAATCGTCTTTGCTGCTTTCCATGGAAACACCTCCGTGACATCTCGCTAGAGGT
TTCGTGGACTCTGACGGAGTTCCTTGCGTTCTTCAAATCTTCCACTTCCGCCGAAATAATCCGGCTAAACATGCG
ACGGCATCCCACAGGTTCCTCCGACCTTCCCCTGCACCCAATAGTCAATTTGCCGAAGCTGAGGTAATTCGGCGT
GTAGTGACCAGCTGATGGCATATACTTACAAACTGATAGGTACCTCGGCATTGAGTCAGATTCAGGCGTGTACTG
TTACGTCGGATACCTGAACTTCCCGGGCATCAAATGCATCGCCCTCTCACAGAAAATTGTGTCTTTGGGAAACTC
GTGGGGAACCGATCCGTCGCCTATTCCAAGTACGGAATTCCAGCAATTTCTCAATCGAACGGCACGATCTGCACA
AGGTATGATCGTGCATGGATACCCGTTCTCAGCTGCAGAAGCTGTTCGTTTGTTCAGCAACGAAGACATGCTCTG
CATACCTGTGATAGAAATCGATGTTGGGGAAGCGGCTGCGGCAGCCATTGTAGAACACATGAAGTCCAACACTTC
TTCCACAATTCCCGTGGTCAAGCGTCAAGGCCGATTGGTCGGTTGGTGCCATGACGAAGCGAGTTGTCGTGCACT
TAACCGGATCTTGCCCTCGTTTGATTTCAAATATCACGGCTGGATGCATCCATACTATCCCAATCATCATTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail