Fungal Genomics

General Properties

Protein ID	Agabi119p4|757600
Gene name
Location	scaffold_11:1157293..1157916
Strand	-
Gene length (bp)	623
Transcript length (bp)	564
Coding sequence length (bp)	564
Protein length (aa)	188

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12937	F-box-like	F-box-like	6.5E-07	68	131

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0003674	molecular_function	No
GO:0005488	binding	No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	440
Change Orthofinder run	5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|118570
Agaricus bisporus var bisporus H97	AgabiH97|118570
Agaricus bisporus var burnettii H119p4	Agabi119p4|118570
Agaricus bisporus var burnettii H119p4	Agabi119p4|757600 (this protein)
Agaricus bisporus var burnettii H119p4	Agabi119p4|759000

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|757600 MTNNPATSWCPYCLQTKPTVTSATLSPRDSVEDVLDAEIEHTEKLISRLLRERTRLYRKRNEIRSPIFSLPPEIL TMIFKFACKPLDFLEAYDWNPLRARVASPDIIRVLTEVSACWHNIVSSTPSLWTSFVADDRDMNTMNTVISRSGN LPVAVSLDFPFPVGSVSHRSHTTIMAPVLQEIASRLR*
Coding	>Agabi119p4|757600 ATGACCAACAATCCTGCGACGTCATGGTGTCCCTACTGCCTTCAAACAAAACCTACCGTGACATCCGCTACATTA TCACCTAGAGATTCAGTGGAGGATGTCCTCGACGCCGAGATCGAACACACAGAAAAGCTCATATCACGTCTACTC CGCGAAAGAACGAGACTGTATAGGAAAAGGAATGAAATACGATCTCCCATATTTTCACTACCCCCCGAAATCCTC ACCATGATCTTCAAGTTCGCATGTAAGCCACTCGACTTTCTGGAGGCGTACGATTGGAACCCGCTTCGTGCTCGG GTCGCGTCTCCCGACATCATCCGCGTGTTGACTGAAGTCTCAGCTTGTTGGCACAACATTGTTTCGTCAACGCCA TCTCTCTGGACTTCATTTGTCGCAGATGACCGTGACATGAACACCATGAACACAGTTATATCCCGTTCTGGGAAT CTTCCTGTCGCCGTTAGCCTCGACTTTCCCTTTCCAGTGGGGTCGGTGTCGCACAGGTCTCATACGACCATTATG GCACCAGTTCTGCAAGAAATCGCTTCTCGGCTTCGTTAA
Transcript	>Agabi119p4|757600 ATGACCAACAATCCTGCGACGTCATGGTGTCCCTACTGCCTTCAAACAAAACCTACCGTGACATCCGCTACATTA TCACCTAGAGATTCAGTGGAGGATGTCCTCGACGCCGAGATCGAACACACAGAAAAGCTCATATCACGTCTACTC CGCGAAAGAACGAGACTGTATAGGAAAAGGAATGAAATACGATCTCCCATATTTTCACTACCCCCCGAAATCCTC ACCATGATCTTCAAGTTCGCATGTAAGCCACTCGACTTTCTGGAGGCGTACGATTGGAACCCGCTTCGTGCTCGG GTCGCGTCTCCCGACATCATCCGCGTGTTGACTGAAGTCTCAGCTTGTTGGCACAACATTGTTTCGTCAACGCCA TCTCTCTGGACTTCATTTGTCGCAGATGACCGTGACATGAACACCATGAACACAGTTATATCCCGTTCTGGGAAT CTTCCTGTCGCCGTTAGCCTCGACTTTCCCTTTCCAGTGGGGTCGGTGTCGCACAGGTCTCATACGACCATTATG GCACCAGTTCTGCAAGAAATCGCTTCTCGGCTTCGTTAA
Gene	>Agabi119p4|757600 ATGACCAACAATCCTGCGACGTCATGGTGTCCCTACTGCCTTCAAACAAAACCTACCGTGACATCCGCTACATTA TCACCTAGAGATTCAGTGGAGGATGTCCTCGACGCCGAGATCGAACACACAGAAAAGCTCATATCACGTCTACTC CGCGAAAGAACGAGACTGTATAGGAAAAGGAATGAAATACGATCTCCCATATTTTCACTACCCCCCGAAATCCTC ACCATGATCTTCAAGTTCGCATGTAAGCCACTCGACTTTCTGGAGGCGTACGATTGGAACCCGCTTCGTGCTCGG GTCGCGTCTCCCGACATCATCCGCGTGTTGACTGAAGTCTCAGCTTGTTGGCACAACATTGTTTCGTCAACGCCA TCTCTCTGGACTTCATTTGTCGCAGATGACCGTGACATGAACACCATGAACACAGTTATATCCCGTTCTGGGAAT CTTCCTGTCGCCGTTAGCCTCGACTTTCCCTTTCCAGTGGGGTCGGTGTCGCACAGGTCTCATACGACCATTATG GCACCAGTTCTGCAAGAAATCGCTTCTCGGGTTCGCATGCTTTACGTGCGTAACGCTCAAACAACCTGGTTGAAA GAATATATCCCTAGCTTCGTTAA