Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|750350
Gene name
Locationscaffold_11:582554..583328
Strand-
Gene length (bp)774
Transcript length (bp)516
Coding sequence length (bp)516
Protein length (aa) 172

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01822 WSC WSC domain 6.8E-09 52 98

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|750350
MGLLTPTALALAIAFAPLTLSNAQATHRANHNVFRHRRQSIPTTLPGNWSSLGCYTDNVASGRTLNAAATASGDS
MTTESCINFCDSKGYIYAGTEYGVSVQEFMVQTLLLFLFLVWPDPKPGIISNESLSGLTVPCVVRNPGASPYLLF
PNLRRGKNVFTNETVPFSLST*
Coding >Agabi119p4|750350
ATGGGTCTCTTGACTCCAACTGCGTTGGCTTTAGCCATCGCTTTCGCTCCTTTAACACTTTCCAATGCACAAGCC
ACGCATCGCGCAAACCACAACGTCTTCCGCCATCGCCGACAATCCATTCCTACCACTCTCCCAGGAAATTGGTCC
TCACTTGGCTGTTACACTGATAATGTCGCTTCTGGTCGCACGCTCAACGCTGCTGCCACCGCGAGTGGTGATTCT
ATGACCACCGAGTCCTGTATCAATTTTTGTGATTCAAAAGGTTACATATATGCTGGAACAGAATACGGTGTAAGT
GTTCAAGAATTTATGGTCCAGACTCTGCTTCTTTTCCTTTTCTTGGTATGGCCTGATCCCAAGCCTGGGATCATA
TCAAATGAAAGTTTATCCGGCCTTACTGTTCCGTGTGTCGTCCGTAATCCTGGCGCCTCGCCTTACCTCCTCTTC
CCAAATCTGAGACGTGGCAAAAATGTATTTACTAACGAAACTGTTCCATTTTCATTGTCAACATAG
Transcript >Agabi119p4|750350
ATGGGTCTCTTGACTCCAACTGCGTTGGCTTTAGCCATCGCTTTCGCTCCTTTAACACTTTCCAATGCACAAGCC
ACGCATCGCGCAAACCACAACGTCTTCCGCCATCGCCGACAATCCATTCCTACCACTCTCCCAGGAAATTGGTCC
TCACTTGGCTGTTACACTGATAATGTCGCTTCTGGTCGCACGCTCAACGCTGCTGCCACCGCGAGTGGTGATTCT
ATGACCACCGAGTCCTGTATCAATTTTTGTGATTCAAAAGGTTACATATATGCTGGAACAGAATACGGTGTAAGT
GTTCAAGAATTTATGGTCCAGACTCTGCTTCTTTTCCTTTTCTTGGTATGGCCTGATCCCAAGCCTGGGATCATA
TCAAATGAAAGTTTATCCGGCCTTACTGTTCCGTGTGTCGTCCGTAATCCTGGCGCCTCGCCTTACCTCCTCTTC
CCAAATCTGAGACGTGGCAAAAATGTATTTACTAACGAAACTGTTCCATTTTCATTGTCAACATAG
Gene >Agabi119p4|750350
ATGGGTCTCTTGACTCCAACTGCGTTGGCTTTAGCCATCGCTTTCGCTCCTGTGCGTTCCGTTCCCCGCGTCCAT
CATCGTTCGCTGGGCGACCTTCTGCTTTTTGCACGCGTACTGACAGCCTTCGTTCGCATCTGTCCCCACGCTTTA
CTATACAGTTAACACTTTCCAATGCACAAGCCACGCATCGCGCAAACCACAACGTCTTCCGCCATCGCCGACAAT
CCATTCCTACCACTCTCCCAGGAAATTGGTCCTCACTTGGCTGTTACACGTACGTTGCACTTATTCTTTATTTTC
CGAGCCGCATCTTTTCTCGTCGGTCCTCTCCGCCCCCGTCGTGTTCTTTACATCACTTCCTTCTGCTTCTAGAGT
TAATTGAATTGAAGCTGACTCCTGTCGTTCACTTATCCTTTGCTATTTAGTGATAATGTCGCTTCTGGTCGCACG
CTCAACGCTGCTGCCACCGCGAGTGGTGATTCTATGACCACCGAGTCCTGTATCAATTTTTGTGATTCAAAAGGT
TACATATATGCTGGAACAGAATACGGTGTAAGTGTTCAAGAATTTATGGTCCAGACTCTGCTTCTTTTCCTTTTC
TTGGTATGGCCTGATCCCAAGCCTGGGATCATATCAAATGAAAGTTTATCCGGCCTTACTGTTCCGTGTGTCGTC
CGTAATCCTGGCGCCTCGCCTTACCTCCTCTTCCCAAATCTGAGACGTGGCAAAAATGTATTTACTAACGAAACT
GTTCCATTTTCATTGTCAACATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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