Fungal Genomics

at Utrecht University

General Properties

Protein ID	Agabi119p4\|749500
Gene name
Location	scaffold_11:416321..417148
Strand	+
Gene length (bp)	827
Transcript length (bp)	768
Coding sequence length (bp)	768
Protein length (aa)	256

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13640	2OG-FeII_Oxy_3	2OG-Fe(II) oxygenase superfamily	8.4E-10	153	243

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 58	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4\|749500 MPSNPPTATTTTVVDNSSNDDNHSAIYPVLDFNKTPLPEYNGHYCKIIDKLFSPSECADLLALAESHTPWSQAAV HYGLGPTQNYVNLEYRNSERILLFDFDAASRIYNKLLPHITEVVELASGIPYSKEIVGGSQLKGFKYKLIGLNER LSYLKYGPGNYFRRHCDGRLELPDLRRSFITIQIYLGDDIDLQGGATRFSSNRSNNSESYIDVDPKLGRVLIFQQ RSLTHSGEEVTKGIKYALRSDLMFTREPVS*
Coding	>Agabi119p4\|749500 ATGCCGTCCAATCCCCCCACCGCCACAACAACCACTGTCGTCGACAATAGTAGTAACGACGACAACCACAGTGCC ATCTATCCTGTTCTCGACTTCAACAAGACTCCTCTTCCTGAATATAACGGCCACTATTGCAAAATTATCGACAAG CTTTTCTCACCTTCCGAATGCGCCGATCTTCTTGCCCTAGCTGAGTCCCACACCCCATGGTCTCAAGCCGCTGTA CATTACGGGTTAGGTCCCACACAAAACTACGTCAACCTTGAATACCGTAACTCTGAGCGGATCTTGCTCTTTGAC TTTGACGCCGCCTCACGAATATACAATAAACTCTTGCCCCACATCACCGAAGTCGTAGAGCTTGCTTCCGGAATC CCTTATAGTAAAGAAATAGTGGGCGGATCCCAATTGAAAGGCTTCAAATACAAACTTATTGGCCTTAACGAACGC CTCAGTTATCTCAAGTATGGCCCCGGAAATTATTTTCGCCGTCACTGTGACGGTAGACTTGAACTTCCAGACCTT CGACGATCGTTCATCACAATCCAGATATACCTGGGAGACGACATTGATCTCCAAGGAGGCGCTACAAGATTTTCG TCAAATCGTTCAAATAACTCAGAGAGCTATATCGACGTCGACCCTAAATTGGGTCGCGTACTCATATTCCAACAA CGAAGCTTGACACACAGTGGCGAAGAGGTGACCAAAGGTATCAAATATGCCCTGAGATCGGATTTGATGTTTACT CGGGAACCCGTAAGCTGA
Transcript	>Agabi119p4\|749500 ATGCCGTCCAATCCCCCCACCGCCACAACAACCACTGTCGTCGACAATAGTAGTAACGACGACAACCACAGTGCC ATCTATCCTGTTCTCGACTTCAACAAGACTCCTCTTCCTGAATATAACGGCCACTATTGCAAAATTATCGACAAG CTTTTCTCACCTTCCGAATGCGCCGATCTTCTTGCCCTAGCTGAGTCCCACACCCCATGGTCTCAAGCCGCTGTA CATTACGGGTTAGGTCCCACACAAAACTACGTCAACCTTGAATACCGTAACTCTGAGCGGATCTTGCTCTTTGAC TTTGACGCCGCCTCACGAATATACAATAAACTCTTGCCCCACATCACCGAAGTCGTAGAGCTTGCTTCCGGAATC CCTTATAGTAAAGAAATAGTGGGCGGATCCCAATTGAAAGGCTTCAAATACAAACTTATTGGCCTTAACGAACGC CTCAGTTATCTCAAGTATGGCCCCGGAAATTATTTTCGCCGTCACTGTGACGGTAGACTTGAACTTCCAGACCTT CGACGATCGTTCATCACAATCCAGATATACCTGGGAGACGACATTGATCTCCAAGGAGGCGCTACAAGATTTTCG TCAAATCGTTCAAATAACTCAGAGAGCTATATCGACGTCGACCCTAAATTGGGTCGCGTACTCATATTCCAACAA CGAAGCTTGACACACAGTGGCGAAGAGGTGACCAAAGGTATCAAATATGCCCTGAGATCGGATTTGATGTTTACT CGGGAACCCGTAAGCTGA
Gene	>Agabi119p4\|749500 ATGCCGTCCAATCCCCCCACCGCCACAACAACCACTGTCGTCGACAATAGTAGTAACGACGACAACCACAGTGCC ATCTATCCTGTTCTCGACTTCAACAAGACTCCTCTTCCTGAATATAACGGCCACTATTGCAAAATTATCGACAAG CTTTTCTCACCTTCCGAATGCGCCGATCTTCTTGCCCTAGCTGAGTCCCACACCCCATGGTCTCAAGCCGCTGTA CATTACGGGTTAGGTCCCACACAAAACTACGTCAACCTTGAATACCGTAACTCTGAGCGGATCTTGCTCTTTGAC TTTGACGCCGCCTCACGAATATACAATAAACTCTTGCCCCACATCACCGAAGTCGTAGAGCTTGCTTCCGGAATC CCTTATAGTAAAGAAATAGTGGGCGGATCCCAATTGAAAGGCTTCAAATACAAACTTATTGGGTATGTTAGCTAT GATCCGAGTCTAACTCATTGACACGATATCATTTCTTTTTGTACAGCCTTAACGAACGCCTCAGTTATCTCAAGT ATGGCCCCGGAAATTATTTTCGCCGTCACTGTGACGGTAGACTTGAACTTCCAGACCTTCGACGATCGTTCATCA CAATCCAGATATACCTGGGAGACGACATTGATCTCCAAGGAGGCGCTACAAGATTTTCGTCAAATCGTTCAAATA ACTCAGAGAGCTATATCGACGTCGACCCTAAATTGGGTCGCGTACTCATATTCCAACAACGAAGCTTGACACACA GTGGCGAAGAGGTGACCAAAGGTATCAAATATGCCCTGAGATCGGATTTGATGTTTACTCGGGAACCCGTAAGCT GA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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