© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|748950 |
| Gene name | |
| Location | scaffold_11:350728..351787 |
| Strand | - |
| Gene length (bp) | 1059 |
| Transcript length (bp) | 1059 |
| Coding sequence length (bp) | 1059 |
| Protein length (aa) | 353 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13975 | gag-asp_proteas | gag-polyprotein putative aspartyl protease | 1.2E-09 | 217 | 303 |
| PF13650 | Asp_protease_2 | Aspartyl protease | 4.2E-08 | 216 | 305 |
| PF09668 | Asp_protease | Aspartyl protease | 1.3E-04 | 216 | 302 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006508 | proteolysis | Yes |
| GO:0004190 | aspartic-type endopeptidase activity | Yes |
| GO:0071704 | organic substance metabolic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0008152 | metabolic process | No |
| GO:0070001 | aspartic-type peptidase activity | No |
| GO:0008150 | biological_process | No |
| GO:0004175 | endopeptidase activity | No |
| GO:0044238 | primary metabolic process | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0008233 | peptidase activity | No |
| GO:0019538 | protein metabolic process | No |
| GO:0140096 | catalytic activity, acting on a protein | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0016787 | hydrolase activity | No |
| Orthofinder run ID | 5 |
| Orthogroup | 80 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|748950 MTEDSSLSEPNSTTTERSSVAKPSSKPAQGPFPYRKVPAMKPVVEVPPMPARYYTEQRKAPSYRHQTQVEEEVDI KDVLARLFGKEVTLTQQELLAMAPKLREMWKEVISKRRVPINHIEDIGEETAKENDKDNTSSSQAMTETWDVVAL DTLESPKKIQQLAKDAQGQYIQTWRIDDPIMQYLSTMTLGDREKQVFSITNKDIIAAKGMENLRVIPAIINGVRE EEALLDSGSQIVSMSRTAASECKLSWDPQLSINMMAANGQVTRTCGVARNVPFTLGNITVHLQVHVLEGAAYRVL LGRPFDVITESKILNSQAGKQYINLTDPSTKEQAMLSTYARGQLPKTADVNF* |
| Coding | >Agabi119p4|748950 ATGACAGAGGACAGTAGCTTATCAGAACCTAACAGTACAACTACGGAAAGAAGTTCCGTAGCTAAGCCCAGTAGT AAACCAGCACAAGGTCCCTTTCCTTATCGAAAGGTACCTGCCATGAAACCTGTAGTAGAAGTGCCGCCTATGCCA GCCAGATATTATACTGAGCAAAGGAAGGCTCCTAGCTATCGACATCAGACTCAAGTAGAGGAAGAAGTTGATATA AAGGATGTCCTAGCTCGACTATTCGGCAAAGAAGTGACGCTAACTCAACAAGAGTTGTTAGCTATGGCACCAAAA CTCAGGGAAATGTGGAAAGAAGTCATCAGCAAAAGAAGAGTACCGATTAATCATATAGAAGACATCGGTGAGGAG ACAGCTAAGGAAAACGACAAAGACAACACCAGTTCCAGTCAAGCTATGACAGAAACTTGGGACGTTGTAGCTTTG GACACCTTAGAATCTCCGAAAAAGATTCAACAGTTAGCTAAAGATGCACAAGGTCAATACATCCAGACCTGGCGC ATTGATGATCCTATCATGCAGTATCTGTCGACAATGACATTAGGTGACAGAGAGAAACAAGTTTTCTCCATTACC AACAAAGATATCATTGCAGCTAAAGGAATGGAAAACCTACGAGTTATCCCAGCTATTATAAATGGAGTCCGAGAA GAAGAAGCACTTTTAGACAGCGGTTCACAGATAGTTTCGATGTCTAGAACAGCAGCTAGCGAGTGTAAGCTCTCT TGGGACCCACAGCTAAGCATAAATATGATGGCAGCTAATGGACAAGTAACGCGAACCTGCGGAGTAGCTAGAAAT GTACCCTTCACCTTAGGGAACATAACAGTTCATCTCCAAGTTCATGTACTCGAAGGAGCAGCTTATAGAGTTCTC CTGGGTCGTCCATTCGATGTTATCACAGAAAGCAAGATCCTTAACTCACAAGCAGGAAAGCAGTACATAAATCTG ACTGATCCTAGTACCAAGGAGCAAGCTATGTTATCTACATATGCGCGAGGTCAGCTACCAAAGACAGCAGACGTA AATTTTTAA |
| Transcript | >Agabi119p4|748950 ATGACAGAGGACAGTAGCTTATCAGAACCTAACAGTACAACTACGGAAAGAAGTTCCGTAGCTAAGCCCAGTAGT AAACCAGCACAAGGTCCCTTTCCTTATCGAAAGGTACCTGCCATGAAACCTGTAGTAGAAGTGCCGCCTATGCCA GCCAGATATTATACTGAGCAAAGGAAGGCTCCTAGCTATCGACATCAGACTCAAGTAGAGGAAGAAGTTGATATA AAGGATGTCCTAGCTCGACTATTCGGCAAAGAAGTGACGCTAACTCAACAAGAGTTGTTAGCTATGGCACCAAAA CTCAGGGAAATGTGGAAAGAAGTCATCAGCAAAAGAAGAGTACCGATTAATCATATAGAAGACATCGGTGAGGAG ACAGCTAAGGAAAACGACAAAGACAACACCAGTTCCAGTCAAGCTATGACAGAAACTTGGGACGTTGTAGCTTTG GACACCTTAGAATCTCCGAAAAAGATTCAACAGTTAGCTAAAGATGCACAAGGTCAATACATCCAGACCTGGCGC ATTGATGATCCTATCATGCAGTATCTGTCGACAATGACATTAGGTGACAGAGAGAAACAAGTTTTCTCCATTACC AACAAAGATATCATTGCAGCTAAAGGAATGGAAAACCTACGAGTTATCCCAGCTATTATAAATGGAGTCCGAGAA GAAGAAGCACTTTTAGACAGCGGTTCACAGATAGTTTCGATGTCTAGAACAGCAGCTAGCGAGTGTAAGCTCTCT TGGGACCCACAGCTAAGCATAAATATGATGGCAGCTAATGGACAAGTAACGCGAACCTGCGGAGTAGCTAGAAAT GTACCCTTCACCTTAGGGAACATAACAGTTCATCTCCAAGTTCATGTACTCGAAGGAGCAGCTTATAGAGTTCTC CTGGGTCGTCCATTCGATGTTATCACAGAAAGCAAGATCCTTAACTCACAAGCAGGAAAGCAGTACATAAATCTG ACTGATCCTAGTACCAAGGAGCAAGCTATGTTATCTACATATGCGCGAGGTCAGCTACCAAAGACAGCAGACGTA AATTTTTAA |
| Gene | >Agabi119p4|748950 ATGACAGAGGACAGTAGCTTATCAGAACCTAACAGTACAACTACGGAAAGAAGTTCCGTAGCTAAGCCCAGTAGT AAACCAGCACAAGGTCCCTTTCCTTATCGAAAGGTACCTGCCATGAAACCTGTAGTAGAAGTGCCGCCTATGCCA GCCAGATATTATACTGAGCAAAGGAAGGCTCCTAGCTATCGACATCAGACTCAAGTAGAGGAAGAAGTTGATATA AAGGATGTCCTAGCTCGACTATTCGGCAAAGAAGTGACGCTAACTCAACAAGAGTTGTTAGCTATGGCACCAAAA CTCAGGGAAATGTGGAAAGAAGTCATCAGCAAAAGAAGAGTACCGATTAATCATATAGAAGACATCGGTGAGGAG ACAGCTAAGGAAAACGACAAAGACAACACCAGTTCCAGTCAAGCTATGACAGAAACTTGGGACGTTGTAGCTTTG GACACCTTAGAATCTCCGAAAAAGATTCAACAGTTAGCTAAAGATGCACAAGGTCAATACATCCAGACCTGGCGC ATTGATGATCCTATCATGCAGTATCTGTCGACAATGACATTAGGTGACAGAGAGAAACAAGTTTTCTCCATTACC AACAAAGATATCATTGCAGCTAAAGGAATGGAAAACCTACGAGTTATCCCAGCTATTATAAATGGAGTCCGAGAA GAAGAAGCACTTTTAGACAGCGGTTCACAGATAGTTTCGATGTCTAGAACAGCAGCTAGCGAGTGTAAGCTCTCT TGGGACCCACAGCTAAGCATAAATATGATGGCAGCTAATGGACAAGTAACGCGAACCTGCGGAGTAGCTAGAAAT GTACCCTTCACCTTAGGGAACATAACAGTTCATCTCCAAGTTCATGTACTCGAAGGAGCAGCTTATAGAGTTCTC CTGGGTCGTCCATTCGATGTTATCACAGAAAGCAAGATCCTTAACTCACAAGCAGGAAAGCAGTACATAAATCTG ACTGATCCTAGTACCAAGGAGCAAGCTATGTTATCTACATATGCGCGAGGTCAGCTACCAAAGACAGCAGACGTA AATTTTTAA |