Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|748400
Gene name
Locationscaffold_11:274561..277464
Strand+
Gene length (bp)2903
Transcript length (bp)2256
Coding sequence length (bp)2256
Protein length (aa) 752

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13415 Kelch_3 Galactose oxidase, central domain 4.9E-05 124 169
PF13415 Kelch_3 Galactose oxidase, central domain 1.2E-06 175 227
PF13415 Kelch_3 Galactose oxidase, central domain 8.6E-05 232 281
PF13418 Kelch_4 Galactose oxidase, central domain 3.3E-04 107 153
PF13418 Kelch_4 Galactose oxidase, central domain 1.6E-06 220 274
PF13422 DUF4110 Domain of unknown function (DUF4110) 6.8E-19 656 724
PF13964 Kelch_6 Kelch motif 2.5E-06 221 266
PF01344 Kelch_1 Kelch motif 3.0E-05 220 265

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q08979|KEL3_YEAST Kelch repeat-containing protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KEL3 PE=1 SV=1 71 568 4.0E-67
sp|Q5R8W1|KLDC4_PONAB Kelch domain-containing protein 4 OS=Pongo abelii GN=KLHDC4 PE=2 SV=1 48 544 5.0E-66
sp|Q8TBB5|KLDC4_HUMAN Kelch domain-containing protein 4 OS=Homo sapiens GN=KLHDC4 PE=1 SV=1 48 544 3.0E-65
sp|Q921I2|KLDC4_MOUSE Kelch domain-containing protein 4 OS=Mus musculus GN=Klhdc4 PE=2 SV=2 48 544 2.0E-64
sp|P87061|TEA1_SCHPO Tip elongation aberrant protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tea1 PE=1 SV=1 118 325 9.0E-12
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Swissprot ID Swissprot Description Start End E-value
sp|Q08979|KEL3_YEAST Kelch repeat-containing protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KEL3 PE=1 SV=1 71 568 4.0E-67
sp|Q5R8W1|KLDC4_PONAB Kelch domain-containing protein 4 OS=Pongo abelii GN=KLHDC4 PE=2 SV=1 48 544 5.0E-66
sp|Q8TBB5|KLDC4_HUMAN Kelch domain-containing protein 4 OS=Homo sapiens GN=KLHDC4 PE=1 SV=1 48 544 3.0E-65
sp|Q921I2|KLDC4_MOUSE Kelch domain-containing protein 4 OS=Mus musculus GN=Klhdc4 PE=2 SV=2 48 544 2.0E-64
sp|P87061|TEA1_SCHPO Tip elongation aberrant protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tea1 PE=1 SV=1 118 325 9.0E-12
sp|Q39610|DYHA_CHLRE Dynein alpha chain, flagellar outer arm OS=Chlamydomonas reinhardtii GN=ODA11 PE=3 SV=2 114 333 4.0E-11
sp|O14248|TEA3_SCHPO Tip elongation aberrant protein 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tea3 PE=1 SV=1 139 291 2.0E-10
sp|Q6AXB2|RABEK_XENLA Rab9 effector protein with kelch motifs OS=Xenopus laevis GN=rabepk PE=2 SV=1 160 272 2.0E-09
sp|P87061|TEA1_SCHPO Tip elongation aberrant protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tea1 PE=1 SV=1 113 319 2.0E-08
sp|A8JAM0|DRC7_CHLRE Dynein regulatory complex subunit 7 (Fragment) OS=Chlamydomonas reinhardtii GN=DRC7 PE=1 SV=1 107 294 2.0E-07
sp|Q6P3S6|FBX42_HUMAN F-box only protein 42 OS=Homo sapiens GN=FBXO42 PE=1 SV=1 138 318 4.0E-07
sp|Q5RDA9|FBX42_PONAB F-box only protein 42 OS=Pongo abelii GN=FBXO42 PE=2 SV=1 138 318 4.0E-07
sp|P80197|AFK_PHYPO Actin-fragmin kinase OS=Physarum polycephalum PE=1 SV=2 147 294 3.0E-06
sp|Q9C8K7|FBK21_ARATH F-box/kelch-repeat protein At1g51550 OS=Arabidopsis thaliana GN=At1g51550 PE=2 SV=1 160 334 5.0E-06
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GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|748400
MRSCDEIKNISANAEVTLSAEGECRIKTPIMPKKKSSNAAAKAAKKAKAAQKIERKETKKVKKSKNKYHSEDEEE
QDLEAILEAMRKEWEDSHTVTEELVEGPPSRRASATLTPCPNGSHLWCIGGEYFSEDGRAYFYNDVFRYTPEKDE
WRKFVSPTCPGPRSAHAVTSSPVGGGKLFLFGGEFSSLHQTTFHHYRDFWCFDIGTHSWDRIDTKVRPSARSGHR
MTTWKQYIILFGGFYDPGVTTRYLNDLWIFDTHEYKWTQVEFREVDPKPSPRSGFSFLSCAEGVVLHGGYCKEYA
KGKRPVGVMLEDTWLLRITIPTEQGATATPSKPPKNKASQPQLVFKWERKKRASDAYAPSLRSGCTMALWNRSSG
AGPTGILFGGVTDEDVHEETLESVFHNDLYGYQLNGKGKWISMVLKKPKAKGGKKVTRAGKKKEAVKETMRGDQE
SEDDEDDEDDMLVKSPKALSAPKPSQSLIQAVNKDSDDPNLTIPMPRYNAMLAVLRNTLYIYGGILEKGSKEYTL
DDFHLVHLDKLERYTCLKESAILIPDGEEESSSDEDDDEDDDEDEEEDDEAEEEPGQGNTEADIRLTEDGVDDEL
NEDTRLKKNTEMTVFIDEVPANNIQEPTDEEVEDPDSLRSKANTFMGVSKDVSRSAEDVLSTPLPGETLAMFYAR
SREYWAQKAYGTSDNRGKELRRDGFARAEERYAEYKPILEEVEKILAEAGLDEEEMRRGAALGGGPAASGQSRNR
R*
Coding >Agabi119p4|748400
ATGCGTAGTTGCGATGAGATCAAAAATATCTCGGCGAATGCCGAGGTTACATTATCCGCCGAGGGCGAATGTCGT
ATTAAAACTCCCATTATGCCAAAAAAGAAGAGTAGCAATGCTGCCGCAAAAGCTGCAAAGAAAGCCAAGGCTGCA
CAAAAGATTGAAAGGAAAGAGACCAAAAAAGTGAAAAAGTCCAAGAACAAGTATCATTCTGAAGATGAGGAAGAG
CAAGATCTCGAGGCGATTTTGGAAGCGATGCGAAAAGAATGGGAAGACTCCCACACAGTCACTGAAGAACTGGTA
GAAGGTCCACCTAGCCGGCGCGCGAGTGCGACTCTTACTCCCTGCCCGAATGGAAGTCATCTATGGTGCATCGGG
GGTGAATATTTCAGCGAGGACGGAAGAGCTTACTTTTATAATGATGTCTTCAGATATACACCAGAGAAGGATGAA
TGGCGCAAATTCGTCTCACCCACCTGTCCTGGTCCAAGGTCGGCACATGCCGTAACCTCATCTCCTGTAGGAGGG
GGAAAGTTGTTTTTGTTCGGCGGAGAATTCTCGTCACTTCATCAGACCACATTCCATCATTATAGGGATTTCTGG
TGTTTTGACATAGGAACGCACTCTTGGGATCGGATTGATACCAAGGTCAGACCCAGTGCTCGATCTGGCCATCGA
ATGACAACCTGGAAACAATACATCATCTTATTCGGCGGATTTTATGATCCGGGTGTCACCACAAGATATTTGAAT
GATCTATGGATCTTCGATACGCATGAATACAAGTGGACTCAAGTGGAGTTTCGTGAAGTGGACCCTAAACCATCA
CCTCGCAGCGGGTTTTCATTCTTGTCATGCGCCGAAGGAGTTGTTTTACATGGTGGATACTGCAAAGAGTATGCG
AAGGGAAAGCGTCCGGTCGGAGTCATGCTTGAAGATACATGGCTACTGAGAATTACCATCCCTACTGAACAAGGA
GCTACTGCTACCCCTTCTAAACCACCCAAAAACAAGGCCTCCCAACCACAACTCGTGTTCAAATGGGAACGTAAG
AAACGTGCATCGGATGCTTACGCGCCGTCCCTTCGTTCTGGATGTACCATGGCCTTGTGGAACAGGAGCAGTGGT
GCAGGACCGACAGGAATTTTATTCGGCGGTGTGACTGATGAGGATGTCCACGAGGAAACACTGGAGAGCGTATTC
CACAACGACTTATACGGCTACCAACTTAACGGAAAAGGCAAATGGATCTCGATGGTGCTGAAGAAACCAAAAGCG
AAAGGTGGGAAAAAGGTGACGCGAGCAGGTAAGAAGAAAGAAGCTGTCAAAGAAACAATGCGGGGAGATCAAGAG
AGCGAAGATGACGAAGACGACGAAGACGATATGTTGGTCAAGTCACCAAAGGCGCTAAGCGCCCCTAAACCCTCG
CAATCGCTTATACAGGCCGTGAATAAAGATTCAGATGATCCTAATCTAACTATTCCTATGCCGCGTTATAATGCC
ATGCTCGCGGTGCTGCGAAACACCCTATATATATATGGCGGAATCCTTGAAAAGGGATCCAAGGAATACACGTTG
GACGACTTCCACCTTGTACACCTCGACAAATTGGAAAGATACACATGTTTGAAAGAAAGTGCGATCTTGATACCC
GATGGTGAAGAAGAGAGTAGCAGCGATGAGGATGATGACGAGGATGATGACGAGGACGAAGAGGAAGACGATGAA
GCTGAGGAGGAACCGGGGCAAGGCAACACAGAAGCGGATATTAGATTGACTGAAGACGGCGTCGACGATGAGCTG
AATGAAGATACGAGATTGAAAAAGAATACAGAGATGACGGTTTTCATTGACGAAGTCCCTGCTAATAATATCCAA
GAACCGACGGATGAAGAGGTCGAAGATCCTGATTCATTACGTTCAAAAGCAAATACGTTCATGGGCGTATCCAAG
GACGTCTCTCGCTCCGCTGAAGACGTGTTGAGTACCCCGCTTCCCGGAGAAACTCTCGCTATGTTTTATGCACGA
TCCCGTGAATACTGGGCTCAGAAAGCGTACGGGACGAGCGACAACAGAGGAAAAGAACTTCGACGGGACGGCTTT
GCCAGGGCTGAAGAACGTTACGCCGAATACAAACCTATACTGGAAGAAGTTGAGAAGATTTTAGCAGAAGCGGGC
TTGGACGAGGAGGAGATGCGCAGAGGCGCTGCACTTGGTGGTGGCCCGGCTGCGAGTGGCCAGAGTCGCAACAGA
AGATAA
Transcript >Agabi119p4|748400
ATGCGTAGTTGCGATGAGATCAAAAATATCTCGGCGAATGCCGAGGTTACATTATCCGCCGAGGGCGAATGTCGT
ATTAAAACTCCCATTATGCCAAAAAAGAAGAGTAGCAATGCTGCCGCAAAAGCTGCAAAGAAAGCCAAGGCTGCA
CAAAAGATTGAAAGGAAAGAGACCAAAAAAGTGAAAAAGTCCAAGAACAAGTATCATTCTGAAGATGAGGAAGAG
CAAGATCTCGAGGCGATTTTGGAAGCGATGCGAAAAGAATGGGAAGACTCCCACACAGTCACTGAAGAACTGGTA
GAAGGTCCACCTAGCCGGCGCGCGAGTGCGACTCTTACTCCCTGCCCGAATGGAAGTCATCTATGGTGCATCGGG
GGTGAATATTTCAGCGAGGACGGAAGAGCTTACTTTTATAATGATGTCTTCAGATATACACCAGAGAAGGATGAA
TGGCGCAAATTCGTCTCACCCACCTGTCCTGGTCCAAGGTCGGCACATGCCGTAACCTCATCTCCTGTAGGAGGG
GGAAAGTTGTTTTTGTTCGGCGGAGAATTCTCGTCACTTCATCAGACCACATTCCATCATTATAGGGATTTCTGG
TGTTTTGACATAGGAACGCACTCTTGGGATCGGATTGATACCAAGGTCAGACCCAGTGCTCGATCTGGCCATCGA
ATGACAACCTGGAAACAATACATCATCTTATTCGGCGGATTTTATGATCCGGGTGTCACCACAAGATATTTGAAT
GATCTATGGATCTTCGATACGCATGAATACAAGTGGACTCAAGTGGAGTTTCGTGAAGTGGACCCTAAACCATCA
CCTCGCAGCGGGTTTTCATTCTTGTCATGCGCCGAAGGAGTTGTTTTACATGGTGGATACTGCAAAGAGTATGCG
AAGGGAAAGCGTCCGGTCGGAGTCATGCTTGAAGATACATGGCTACTGAGAATTACCATCCCTACTGAACAAGGA
GCTACTGCTACCCCTTCTAAACCACCCAAAAACAAGGCCTCCCAACCACAACTCGTGTTCAAATGGGAACGTAAG
AAACGTGCATCGGATGCTTACGCGCCGTCCCTTCGTTCTGGATGTACCATGGCCTTGTGGAACAGGAGCAGTGGT
GCAGGACCGACAGGAATTTTATTCGGCGGTGTGACTGATGAGGATGTCCACGAGGAAACACTGGAGAGCGTATTC
CACAACGACTTATACGGCTACCAACTTAACGGAAAAGGCAAATGGATCTCGATGGTGCTGAAGAAACCAAAAGCG
AAAGGTGGGAAAAAGGTGACGCGAGCAGGTAAGAAGAAAGAAGCTGTCAAAGAAACAATGCGGGGAGATCAAGAG
AGCGAAGATGACGAAGACGACGAAGACGATATGTTGGTCAAGTCACCAAAGGCGCTAAGCGCCCCTAAACCCTCG
CAATCGCTTATACAGGCCGTGAATAAAGATTCAGATGATCCTAATCTAACTATTCCTATGCCGCGTTATAATGCC
ATGCTCGCGGTGCTGCGAAACACCCTATATATATATGGCGGAATCCTTGAAAAGGGATCCAAGGAATACACGTTG
GACGACTTCCACCTTGTACACCTCGACAAATTGGAAAGATACACATGTTTGAAAGAAAGTGCGATCTTGATACCC
GATGGTGAAGAAGAGAGTAGCAGCGATGAGGATGATGACGAGGATGATGACGAGGACGAAGAGGAAGACGATGAA
GCTGAGGAGGAACCGGGGCAAGGCAACACAGAAGCGGATATTAGATTGACTGAAGACGGCGTCGACGATGAGCTG
AATGAAGATACGAGATTGAAAAAGAATACAGAGATGACGGTTTTCATTGACGAAGTCCCTGCTAATAATATCCAA
GAACCGACGGATGAAGAGGTCGAAGATCCTGATTCATTACGTTCAAAAGCAAATACGTTCATGGGCGTATCCAAG
GACGTCTCTCGCTCCGCTGAAGACGTGTTGAGTACCCCGCTTCCCGGAGAAACTCTCGCTATGTTTTATGCACGA
TCCCGTGAATACTGGGCTCAGAAAGCGTACGGGACGAGCGACAACAGAGGAAAAGAACTTCGACGGGACGGCTTT
GCCAGGGCTGAAGAACGTTACGCCGAATACAAACCTATACTGGAAGAAGTTGAGAAGATTTTAGCAGAAGCGGGC
TTGGACGAGGAGGAGATGCGCAGAGGCGCTGCACTTGGTGGTGGCCCGGCTGCGAGTGGCCAGAGTCGCAACAGA
AGATAA
Gene >Agabi119p4|748400
ATGCGTAGTTGCGATGAGATCAAAAATATCTCGGCGAATGCCGAGGTTACATTATCCGCCGAGGGCGAATGTCGT
ATTAAAACTCCCATTATGCCAAAAAAGAAGAGTAGCAATGCTGCCGCAAAAGCTGCAAAGAAAGCCAAGGCTGCA
CAAAAGATTGAAAGGAAAGAGACCAAAAAAGTGAAAAAGTCCAAGAACAAGTATCATTCTGAAGATGAGGAAGAG
CAAGATCTCGAGGCGATTTTGGAAGCGGTATATTCACATCTGTTTTACATTTGTGCTCGAATCTTGACTGACGTT
GTTCACCGTAGTAGATGCGAAAAGAATGGGAAGACTCCCACACAGTCACTGAAGAACTGGTAGAAGGTCCACCTA
GCCGGCGCGCGAGTGCGACTCTTACTCCCTGCCCGAATGGAAGTCATCTATGGTGCATCGGGGGTGAATATTTCA
GCGAGGACGGAAGAGCTGTACGTATCCCAAGCGTTTTACTGCAATGCCAGATCTCATGAGCATACGCAGTACTTT
TATAATGATGTCTTCAGATATACACCAGAGAAGGATGAATGGCGCAAATTCGTCTCACCCACCTGTCCTGGTCCA
AGGTCGGCACATGCCGTAACCTCATCTCCTGTAGGAGGGGGAAAGTTGTTTTTGTTCGGTATATGGCGGTAGATC
TTTACCTCTCAATGCCTTAATTGACTCGACGATCGGCAGGCGGAGAATTCTCGTCACTTCATCAGACCACATTCC
ATCATTATAGGGATTTCTGGTGTTTTGACATAGGAACGCACTCTTGGGATCGGATTGATACCAAGGTCAGACCCA
GTGCTCGATCTGGCCATCGGTGAGCTTCATTATAGCGACCTCACCATTCGTCAAGACTTAATTGTTGTAGAATGA
CAACCTGGAAACAATACATCATCTTATTCGGCGGATTTTATGATCCGGGTGTCACCAGTAAGCCTTCCCTCGTGA
TGTATTCATTCCTTCTAAGTTACCTCTCAAATTAGCAAGATATTTGAATGATCTATGGATCTTCGATACGCATGA
ATACAAGTGGACTCAAGTGGAGTTTCGTGAAGTGGACCCTAAACCATCGTAAGCTGATCGTGCACGCCAAGGTCA
CCGATCGTTAATCATACAACAGACCTCGCAGCGGGTTTTCATTCTTGTCATGCGCCGAAGGAGTTGTTTTACATG
GTGGATACTGCAAAGAGTATGCGAAGGGAAAGCGTCCGGTCGGAGTCATGCTTGAAGATACATGGCTACTGAGGT
CCGTCTCATATGTTTTAACTCTTCTTCTTCATAACGAATCGACTTCACCGTGCTCCAGAATTACCATCCCTACTG
AACAAGGAGCTACTGCTACCCCTTCTAAACCACCCAAAAACAAGGCCTCCCAACCACAACTCGTGTTCAAATGGG
AACGTAAGAAACGTGCATCGGATGCTTACGCGCCGTCCCTTCGTTCTGGATGTACCATGGCCTTGTGGAACAGGA
GCAGTGGTGCAGGACCGACAGGAATTTTATTCGGCGGTGTGACTGATGAGGATGTCCACGAGGAAACACTGGAGA
GCGTATTCCACAACGACTTGTCTGTATTATTCTCTCCTAGACCAGTATTTGTCATTGATTCTTTATAGATACGGC
TACCAACTTAACGGAAAAGGCAAATGGATCTCGATGGTGCTGAAGAAACCAAAAGCGAAAGGTGGGAAAAAGGTG
ACGCGAGCAGGTAAGAAGAAAGAAGCTGTCAAAGAAACAATGCGGGGAGATCAAGAGAGCGAAGATGACGAAGAC
GACGAAGACGATATGTTGGTCAAGTCACCAAAGGCGCTAAGCGCCCCTAAACCCTCGCAATCGCTTATACAGGCC
GTGAATAAAGATTCAGATGATCCTAATCTAACTATTCCTATGCCGCGTTATAATGCCATGCTCGCGGTGCTGCGA
AACACCCTATATATGTGAGTCCTTTCGATCGTCGTCATTCAATCGGATGCGTTGAACCCATTGCAGATATGGCGG
AATCCTTGAAAAGGGATCCAAGGAATACACGTTGGACGACTTCCACCTTGTACACCTCGACAAATTGGAAAGATA
CACATGTTTGAAAGAAAGTGCGATCTTGATACCCGATGGTGAAGAAGAGAGTAGCAGCGATGAGGATGATGACGA
GGATGATGACGAGGACGAAGAGGAAGACGATGAAGCTGAGGAGGAACCGGGGCAAGGCAACACAGAAGCGGATAT
TAGATTGACTGAAGACGGCGTCGACGATGAGCTGAATGAAGATACGAGATTGAAAAAGAATACAGAGATGACGGT
TTTCATTGACGAAGTCCCTGCTAATAATATCCAAGAACCGACGGATGAAGAGGTCGAAGATCCTGTACGTCGGAG
CATGTCTGATCAGTTCTTCCACTGACGTATCTTAGGATTCATTACGTTCAAAAGCAAATACGTTCATGGGCGTAT
CCAAGGACGTCTCTCGCTCCGCTGAAGACGTGTTGAGTACCCCGCTTCCCGGAGAAACTCTCGCTATGTTTTATG
CACGATCCCGTATGCGTACCCAAACATATAAGATTCTCTTGATTATGGCTCATTTCAAAAACACAGGTGAATACT
GGGCTCAGAAAGCGTACGGGACGAGCGACAACAGAGGAAAAGAACTTCGACGGGACGGCTTTGCCAGGGCTGAAG
AACGTTACGGTAAGATTACCCTCTGGGTTGTGATATAGTAATTATGATGCCGGTCTTTGATGCTTCTAGCCGAAT
ACAAACCTATACTGGAAGAAGTTGAGAAGATTTTAGCAGAAGCGGGCTTGGACGAGGAGGAGATGCGCAGAGGCG
CTGCACTTGGTGGTGGCCCGGCTGCGAGTGGCCAGAGTCGCAACAGAAGATAA

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