Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|745450
Gene name
Locationscaffold_10:1820468..1820832
Strand+
Gene length (bp)364
Transcript length (bp)312
Coding sequence length (bp)312
Protein length (aa) 104

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF19373 DUF5948 Family of unknown function (DUF5948) 4.2E-17 34 102

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|745450
MRASLTIFALIVSTGVGAFAGAIEHDHLVKRGGAQICTFNLDGSGETDVQVTKDCCAFFDQEAYFNKEEKQCQPY
SSFSQPGVGHAGTYVDCCSSRGRGSRAV*
Coding >Agabi119p4|745450
ATGCGAGCCTCTCTCACTATTTTTGCTCTCATCGTTTCAACCGGTGTTGGTGCCTTTGCCGGCGCAATCGAGCAT
GATCACCTTGTTAAGCGAGGAGGGGCACAAATTTGCACCTTCAACTTGGACGGCAGCGGAGAGACTGATGTGCAG
GTCACTAAAGATTGCTGCGCCTTCTTTGATCAGGAGGCCTATTTCAATAAGGAAGAGAAACAGTGCCAGCCTTAC
AGTAGTTTCTCGCAACCCGGCGTTGGTCATGCAGGGACGTATGTTGATTGCTGCTCTAGCCGTGGCCGCGGAAGC
CGTGCAGTCTAA
Transcript >Agabi119p4|745450
ATGCGAGCCTCTCTCACTATTTTTGCTCTCATCGTTTCAACCGGTGTTGGTGCCTTTGCCGGCGCAATCGAGCAT
GATCACCTTGTTAAGCGAGGAGGGGCACAAATTTGCACCTTCAACTTGGACGGCAGCGGAGAGACTGATGTGCAG
GTCACTAAAGATTGCTGCGCCTTCTTTGATCAGGAGGCCTATTTCAATAAGGAAGAGAAACAGTGCCAGCCTTAC
AGTAGTTTCTCGCAACCCGGCGTTGGTCATGCAGGGACGTATGTTGATTGCTGCTCTAGCCGTGGCCGCGGAAGC
CGTGCAGTCTAA
Gene >Agabi119p4|745450
ATGCGAGCCTCTCTCACTATTTTTGCTCTCATCGTTTCAACCGGTGTTGGTGCCTTTGCCGGCGCAATCGAGCAT
GGTAGGTGAACCTTTGCATCTTGTTCATATCCCTCCTGACACATGTTCCTTAGATCACCTTGTTAAGCGAGGAGG
GGCACAAATTTGCACCTTCAACTTGGACGGCAGCGGAGAGACTGATGTGCAGGTCACTAAAGATTGCTGCGCCTT
CTTTGATCAGGAGGCCTATTTCAATAAGGAAGAGAAACAGTGCCAGCCTTACAGTAGTTTCTCGCAACCCGGCGT
TGGTCATGCAGGGACGTATGTTGATTGCTGCTCTAGCCGTGGCCGCGGAAGCCGTGCAGTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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