Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|739100
Gene name
Locationscaffold_10:1212752..1213504
Strand-
Gene length (bp)752
Transcript length (bp)543
Coding sequence length (bp)543
Protein length (aa) 181

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10342 Kre9_KNH Kre9/KNH-like N-terminal Ig-like domain 1.7E-05 27 120

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|739100
MVALSALALALSAASLAAAQSTFKITNPSADHWWVAESSNVLTWDCKNNPHTTFGVFIANADQTLFAGDLAIIPQ
QPNADCSKEITHNQVNQPPGSGYIIKFANAVNSSEVFAQSDQFEIRPLGSAFPTTSSPAGNSPSNTADNTAAGAS
STDTPNGAASLKTLGIGFTAAAAGALAYLM*
Coding >Agabi119p4|739100
ATGGTCGCCCTCTCCGCCCTCGCCCTTGCCCTCTCCGCCGCCAGCCTTGCTGCTGCCCAGTCGACCTTCAAGATC
ACCAATCCCTCCGCGGACCACTGGTGGGTTGCTGAATCGTCGAATGTTCTTACTTGGGACTGCAAGAACAACCCA
CATACCACATTTGGTGTTTTCATTGCCAACGCAGACCAAACATTGTTTGCAGGAGACCTCGCTATTATCCCTCAA
CAGCCTAATGCCGACTGCTCCAAGGAAATCACTCACAACCAAGTCAACCAACCTCCCGGCAGTGGCTACATAATC
AAGTTCGCCAACGCTGTCAACAGCTCAGAGGTCTTTGCTCAATCCGACCAGTTCGAGATCAGACCTCTCGGTTCT
GCGTTCCCCACTACCTCGTCACCAGCAGGTAATAGCCCATCCAATACCGCAGACAACACAGCCGCCGGTGCTTCA
TCCACTGACACACCCAACGGCGCTGCCTCTCTCAAAACTCTCGGTATCGGTTTCACCGCTGCCGCAGCTGGCGCC
TTGGCGTATCTCATGTGA
Transcript >Agabi119p4|739100
ATGGTCGCCCTCTCCGCCCTCGCCCTTGCCCTCTCCGCCGCCAGCCTTGCTGCTGCCCAGTCGACCTTCAAGATC
ACCAATCCCTCCGCGGACCACTGGTGGGTTGCTGAATCGTCGAATGTTCTTACTTGGGACTGCAAGAACAACCCA
CATACCACATTTGGTGTTTTCATTGCCAACGCAGACCAAACATTGTTTGCAGGAGACCTCGCTATTATCCCTCAA
CAGCCTAATGCCGACTGCTCCAAGGAAATCACTCACAACCAAGTCAACCAACCTCCCGGCAGTGGCTACATAATC
AAGTTCGCCAACGCTGTCAACAGCTCAGAGGTCTTTGCTCAATCCGACCAGTTCGAGATCAGACCTCTCGGTTCT
GCGTTCCCCACTACCTCGTCACCAGCAGGTAATAGCCCATCCAATACCGCAGACAACACAGCCGCCGGTGCTTCA
TCCACTGACACACCCAACGGCGCTGCCTCTCTCAAAACTCTCGGTATCGGTTTCACCGCTGCCGCAGCTGGCGCC
TTGGCGTATCTCATGTGA
Gene >Agabi119p4|739100
ATGGTCGCCCTCTCCGCCCTCGCCCTTGCCCTCTCCGCCGCCAGCCTTGCTGCTGCCCAGTCGACCTTCAAGATC
ACCAATCCCTCCGCGGACCACTGGTGGGGTGAGCTGTCGTCTTTTCTTCCTAGCTACAAACACAACTGACAGAGG
CTAAGTTGCTGAATCGTCGAATGTTCTTACTTGGGACTGCAAGAACAACCCACATACCACATTTGGTGTTTTGTA
CGTGTCTGGCTCCCCACTTCACTGGCCCGTTCTCACGCCTCTCTCTCGTCTAGCATTGCCAACGCAGTATGGCTA
CCCGTTAACATAAAATAAAATAATTATACTCATTCATTTCACAGGACCAAACATTGTTTGCAGGAGACCTCGCTA
TTATCCCTCAACAGCCTAATGCCGACTGCTCCAAGGAAATCACTCACAACCAAGTCAACCAACCTCCCGGCAGTG
GCTACATAATCAAGTTCGCCAACGCTGTCAACAGCTCAGAGGTACGTTTTTCCAACTCTTCGCTCCAACCCATGT
TGATCCTTTCAAAGGTCTTTGCTCAATCCGACCAGTTCGAGATCAGACCTCTCGGTTCTGCGTTCCCCACTACCT
CGTCACCAGCAGGTAATAGCCCATCCAATACCGCAGACAACACAGCCGCCGGTGCTTCATCCACTGACACACCCA
ACGGCGCTGCCTCTCTCAAAACTCTCGGTATCGGTTTCACCGCTGCCGCAGCTGGCGCCTTGGCGTATCTCATGT
GA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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