Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|728950
Gene name
Locationscaffold_10:407493..409459
Strand-
Gene length (bp)1966
Transcript length (bp)1575
Coding sequence length (bp)1575
Protein length (aa) 525

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12937 F-box-like F-box-like 2.4E-08 59 135

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID5
Orthogroup8910
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|016450
Agaricus bisporus var bisporus H97 AgabiH97|016450
Agaricus bisporus var burnettii H119p4 Agabi119p4|728950 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|728950
MSIAECPRCGYHLAKAEVKVEEVPALQAEVRRLKDLIPRLQEETAVLLRRINNAQEKTRNLPFEVLSKIFLFVRP
PTDFTAHEPKIYGVDDPSRPPLTGYHDPAEDFHYTLATVSHRWRQVVFSTPQLWTSISLRVLNTSTEFNTSLLDL
HFKNASDLPISIQIDFSNPTFLFESDPSQRSDTLVRLQPLAKAMFGENSDQVQSLFLIQPPAEWLSFVSGSLSRC
KSMSTYWPSSEPHCKYFFNFHDLPCLQHVKLIGSDFPLTLPTTTSSLQLSFIELYKSIRLLMELPNLVTFESTHH
WNESLDYGDVTKPIVLHGLENLTWDAQHIDYMHGFLRHVRFDNLRTLQWYEGRLFWSDASEEGESLRLAFFSALP
STLSSLTFNETALHSHAILNLLYCVPQLTELHFINYHSSVVEDTIKAIGRSLTNTGTPSSSLTVLPNLCVLSLSN
AKNFGGRTLEPFVLIQLLETLLNAASPRPRQFQLTTHSEVTWHSDALDKVRTLLSSGLDAKITFDVDGFKSEMS*
Coding >Agabi119p4|728950
ATGTCCATTGCGGAATGTCCTCGTTGTGGTTATCATCTCGCGAAAGCTGAAGTAAAGGTTGAAGAAGTCCCCGCC
CTTCAGGCTGAGGTCCGCCGTCTCAAGGACCTGATTCCCCGTCTTCAAGAAGAGACAGCTGTTCTTTTGCGCAGA
ATAAACAACGCTCAAGAAAAAACGAGAAATCTGCCGTTTGAAGTGTTGTCGAAGATCTTTCTGTTTGTTCGTCCG
CCGACTGACTTCACCGCCCACGAGCCCAAAATCTATGGTGTTGATGACCCAAGCCGCCCACCATTGACAGGATAT
CATGATCCTGCCGAGGACTTCCATTACACTTTGGCGACTGTGTCTCATCGTTGGCGCCAGGTCGTGTTCTCAACT
CCACAACTCTGGACTTCAATCTCGCTTCGTGTTCTTAATACAAGCACCGAATTCAACACGTCACTCCTCGATCTA
CATTTCAAAAATGCGAGTGACCTTCCGATCTCAATTCAAATCGACTTCAGTAATCCTACATTTTTGTTTGAGAGC
GATCCTTCACAACGTTCAGACACCCTCGTGCGTCTGCAACCTCTTGCAAAAGCCATGTTCGGAGAGAATTCGGAC
CAAGTACAAAGCCTCTTTCTCATCCAGCCACCGGCTGAATGGTTGTCTTTTGTCAGCGGCAGCCTCTCGCGTTGC
AAATCTATGTCAACTTATTGGCCAAGTTCGGAGCCTCACTGCAAGTACTTCTTTAACTTCCATGATCTTCCTTGT
CTTCAGCACGTGAAGCTGATCGGCAGTGATTTTCCACTTACTTTGCCTACTACAACATCTTCTCTACAGTTGTCC
TTCATCGAATTATACAAGTCCATTCGATTACTCATGGAATTACCAAATCTCGTTACATTCGAGAGTACTCATCAC
TGGAACGAATCTTTGGATTACGGAGATGTCACTAAACCCATAGTACTTCATGGTCTCGAAAACTTGACATGGGAT
GCACAACACATAGACTATATGCATGGTTTTCTGCGCCATGTTCGTTTCGACAACCTTCGCACGTTACAATGGTAT
GAAGGCAGGCTCTTTTGGAGTGACGCTTCCGAAGAAGGCGAGAGTTTACGACTTGCCTTCTTTTCCGCACTACCA
TCCACTCTTTCGTCCCTGACCTTCAACGAAACCGCGCTCCATTCTCATGCCATACTCAATCTACTGTATTGCGTC
CCTCAACTGACCGAACTCCACTTCATCAACTATCATTCTTCGGTTGTTGAAGACACCATCAAGGCGATTGGACGG
TCCCTCACAAATACAGGGACACCGTCTTCGTCATTGACTGTTCTGCCAAACCTTTGTGTCTTATCTCTCTCAAAC
GCCAAAAACTTCGGTGGGAGGACGCTCGAGCCGTTTGTACTCATTCAATTGCTGGAAACACTGCTAAACGCTGCT
AGCCCACGACCAAGACAATTCCAATTAACCACTCATTCTGAAGTGACTTGGCATTCAGATGCCTTGGACAAAGTT
CGGACACTATTGTCTTCCGGTTTGGATGCGAAGATCACATTTGATGTTGATGGTTTCAAGTCAGAGATGTCTTAG
Transcript >Agabi119p4|728950
ATGTCCATTGCGGAATGTCCTCGTTGTGGTTATCATCTCGCGAAAGCTGAAGTAAAGGTTGAAGAAGTCCCCGCC
CTTCAGGCTGAGGTCCGCCGTCTCAAGGACCTGATTCCCCGTCTTCAAGAAGAGACAGCTGTTCTTTTGCGCAGA
ATAAACAACGCTCAAGAAAAAACGAGAAATCTGCCGTTTGAAGTGTTGTCGAAGATCTTTCTGTTTGTTCGTCCG
CCGACTGACTTCACCGCCCACGAGCCCAAAATCTATGGTGTTGATGACCCAAGCCGCCCACCATTGACAGGATAT
CATGATCCTGCCGAGGACTTCCATTACACTTTGGCGACTGTGTCTCATCGTTGGCGCCAGGTCGTGTTCTCAACT
CCACAACTCTGGACTTCAATCTCGCTTCGTGTTCTTAATACAAGCACCGAATTCAACACGTCACTCCTCGATCTA
CATTTCAAAAATGCGAGTGACCTTCCGATCTCAATTCAAATCGACTTCAGTAATCCTACATTTTTGTTTGAGAGC
GATCCTTCACAACGTTCAGACACCCTCGTGCGTCTGCAACCTCTTGCAAAAGCCATGTTCGGAGAGAATTCGGAC
CAAGTACAAAGCCTCTTTCTCATCCAGCCACCGGCTGAATGGTTGTCTTTTGTCAGCGGCAGCCTCTCGCGTTGC
AAATCTATGTCAACTTATTGGCCAAGTTCGGAGCCTCACTGCAAGTACTTCTTTAACTTCCATGATCTTCCTTGT
CTTCAGCACGTGAAGCTGATCGGCAGTGATTTTCCACTTACTTTGCCTACTACAACATCTTCTCTACAGTTGTCC
TTCATCGAATTATACAAGTCCATTCGATTACTCATGGAATTACCAAATCTCGTTACATTCGAGAGTACTCATCAC
TGGAACGAATCTTTGGATTACGGAGATGTCACTAAACCCATAGTACTTCATGGTCTCGAAAACTTGACATGGGAT
GCACAACACATAGACTATATGCATGGTTTTCTGCGCCATGTTCGTTTCGACAACCTTCGCACGTTACAATGGTAT
GAAGGCAGGCTCTTTTGGAGTGACGCTTCCGAAGAAGGCGAGAGTTTACGACTTGCCTTCTTTTCCGCACTACCA
TCCACTCTTTCGTCCCTGACCTTCAACGAAACCGCGCTCCATTCTCATGCCATACTCAATCTACTGTATTGCGTC
CCTCAACTGACCGAACTCCACTTCATCAACTATCATTCTTCGGTTGTTGAAGACACCATCAAGGCGATTGGACGG
TCCCTCACAAATACAGGGACACCGTCTTCGTCATTGACTGTTCTGCCAAACCTTTGTGTCTTATCTCTCTCAAAC
GCCAAAAACTTCGGTGGGAGGACGCTCGAGCCGTTTGTACTCATTCAATTGCTGGAAACACTGCTAAACGCTGCT
AGCCCACGACCAAGACAATTCCAATTAACCACTCATTCTGAAGTGACTTGGCATTCAGATGCCTTGGACAAAGTT
CGGACACTATTGTCTTCCGGTTTGGATGCGAAGATCACATTTGATGTTGATGGTTTCAAGTCAGAGATGTCTTAG
Gene >Agabi119p4|728950
ATGTCCATTGCGGAATGTCCTCGTTGTGGTTATCATCTCGCGAAAGCTGAAGTAAAGGTACACCGCCCATCAGCA
AATTGGCAATTTTCTTTTTACCTTTTGTCGCTTTTCGGCCTTTTTGCAAATTTGATACATGTGCAAAAGCCAGGC
AAAAGTCGAAATAATAAAATGGTCTTTTCAGCATTAGGTACATCTAGTAGTAACATCTGTAACCTTCAGTTTTTT
TCCCAGGTTTTCGCTTTTTCCAGTTTTTCACGGCGTCTGCAGGAGGCCAGCTTTTTTTGAATCCGGGCCCAAAAC
GTGGCAACAACTTTTTTGCCGCTTTTTATCGCTTTTTATCGCTTTTTTAGCTTGTACAAGCGAAAAAAAGCGAAA
AAAAGCTAATTGCCAAACTTCTGATGCCCCCGACATTCATTTCTCAAATAACGTAACTGAATAGGGCCGTCAGGT
TGAAGAAGTCCCCGCCCTTCAGGCTGAGGTCCGCCGTCTCAAGGACCTGATTCCCCGTCTTCAAGAAGAGACAGC
TGTTCTTTTGCGCAGAATAAACAACGCTCAAGAAAAAACGAGAAATCTGCCGTTTGAAGTGTTGTCGAAGATCTT
TCTGTTTGTTCGTCCGCCGACTGACTTCACCGCCCACGAGCCCAAAATCTATGGTGTTGATGACCCAAGCCGCCC
ACCATTGACAGGATATCATGATCCTGCCGAGGACTTCCATTACACTTTGGCGACTGTGTCTCATCGTTGGCGCCA
GGTCGTGTTCTCAACTCCACAACTCTGGACTTCAATCTCGCTTCGTGTTCTTAATACAAGCACCGAATTCAACAC
GTCACTCCTCGATCTACATTTCAAAAATGCGAGTGACCTTCCGATCTCAATTCAAATCGACTTCAGTAATCCTAC
ATTTTTGTTTGAGAGCGATCCTTCACAACGTTCAGACACCCTCGTGCGTCTGCAACCTCTTGCAAAAGCCATGTT
CGGAGAGAATTCGGACCAAGTACAAAGCCTCTTTCTCATCCAGCCACCGGCTGAATGGTTGTCTTTTGTCAGCGG
CAGCCTCTCGCGTTGCAAATCTATGTCAACTTATTGGCCAAGTTCGGAGCCTCACTGCAAGTACTTCTTTAACTT
CCATGATCTTCCTTGTCTTCAGCACGTGAAGCTGATCGGCAGTGATTTTCCACTTACTTTGCCTACTACAACATC
TTCTCTACAGTTGTCCTTCATCGAATTATACAAGTCCATTCGATTACTCATGGAATTACCAAATCTCGTTACATT
CGAGAGTACTCATCACTGGAACGAATCTTTGGATTACGGAGATGTCACTAAACCCATAGTACTTCATGGTCTCGA
AAACTTGACATGGGATGCACAACACATAGACTATATGCATGGTTTTCTGCGCCATGTTCGTTTCGACAACCTTCG
CACGTTACAATGGTATGAAGGCAGGCTCTTTTGGAGTGACGCTTCCGAAGAAGGCGAGAGTTTACGACTTGCCTT
CTTTTCCGCACTACCATCCACTCTTTCGTCCCTGACCTTCAACGAAACCGCGCTCCATTCTCATGCCATACTCAA
TCTACTGTATTGCGTCCCTCAACTGACCGAACTCCACTTCATCAACTATCATTCTTCGGTTGTTGAAGACACCAT
CAAGGCGATTGGACGGTCCCTCACAAATACAGGGACACCGTCTTCGTCATTGACTGTTCTGCCAAACCTTTGTGT
CTTATCTCTCTCAAACGCCAAAAACTTCGGTGGGAGGACGCTCGAGCCGTTTGTACTCATTCAATTGCTGGAAAC
ACTGCTAAACGCTGCTAGCCCACGACCAAGACAATTCCAATTAACCACTCATTCTGAAGTGACTTGGCATTCAGA
TGCCTTGGACAAAGTTCGGACACTATTGTCTTCCGGTTTGGATGCGAAGATCACATTTGATGTTGATGGTTTCAA
GTCAGAGATGTCTTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail