Fungal Genomics

General Properties

Protein ID	Agabi119p4|728800
Gene name
Location	scaffold_10:401081..402521
Strand	-
Gene length (bp)	1440
Transcript length (bp)	1440
Coding sequence length (bp)	1440
Protein length (aa)	480

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12937	F-box-like	F-box-like	4.6E-08	68	118

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0003674	molecular_function	No
GO:0005488	binding	No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	8908
Change Orthofinder run	5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|016420
Agaricus bisporus var bisporus H97	AgabiH97|016420
Agaricus bisporus var burnettii H119p4	Agabi119p4|728800 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|728800 MSPTSTETSSRMLCGCQCKGHWFTVEARKDEPDFIYEDIERLNEVIDHFRILKAQRLRQFNKIHSSMRNLPNEIL LSIFEHYCSLVGPRKHPVLTLGAVSAHWRDLVENSSQLWTRFDLVLSDEMLPGAASLLEMYREHNGSSFESIQLD FRMFSAGRQCKERRNPIQRLVQSIKTLETFPRIKLHQPPVDLLRILNNDLNVPEVHLSNPPHLVTGEKTIPRFSF PWLALTTLKLCQIQVDVCTNLLLGCPNLVEFSTNDPLLATDECIRPTSDHAHAISFPKLRYLSWYHAWRLWDDNL LSFYRFPALEYFDWRGNGYDHSLNLFSSFIISLPQSCRTIQISAGKENNMVMKLQILQLIKNHPIDKLICSHFDI LSLHIILERLKDSTFIPSLNFFKWEQGVGCDTYESDRIFKLTRLFKDVLRCRHEMGVVGFRMEIDGLRTRVPYNK HEVYKIMEGSGFDIDIAEDGRWIMSIMSL*
Coding	>Agabi119p4|728800 ATGTCGCCCACCTCAACTGAAACATCGTCCCGCATGCTTTGCGGTTGCCAATGTAAAGGACATTGGTTCACTGTC GAAGCCCGGAAAGACGAACCCGACTTTATCTATGAAGATATTGAAAGGCTGAACGAGGTTATCGATCATTTTCGC ATACTCAAAGCCCAGCGTCTCCGCCAATTCAACAAAATTCATTCATCGATGAGAAACCTTCCTAATGAAATCCTT CTCTCTATTTTTGAACATTACTGTTCACTCGTCGGACCTCGAAAACACCCCGTACTCACGCTGGGAGCTGTATCC GCTCATTGGCGTGATCTAGTCGAGAATTCTTCTCAACTTTGGACGAGGTTTGATTTGGTTCTTTCTGATGAGATG CTTCCGGGGGCTGCTTCTTTGCTGGAAATGTATAGGGAGCATAACGGGTCGTCATTCGAGTCTATTCAGCTAGAC TTTCGAATGTTTAGCGCCGGCCGGCAGTGCAAGGAAAGAAGAAATCCCATACAGAGACTCGTACAGTCTATCAAA ACACTGGAGACATTCCCGAGAATCAAACTTCATCAACCTCCTGTTGACTTATTACGCATCTTAAACAATGATCTC AACGTCCCCGAGGTGCATTTGTCAAATCCACCCCATCTCGTCACTGGAGAAAAGACCATACCAAGATTCTCATTT CCTTGGTTGGCACTTACGACTCTCAAATTATGTCAAATCCAAGTCGATGTTTGTACCAACTTACTCCTTGGATGT CCGAATCTCGTCGAATTCTCGACTAACGATCCTTTACTTGCCACCGACGAATGTATTCGACCTACCTCTGACCAT GCTCATGCAATTTCTTTTCCCAAATTGCGATATTTATCGTGGTACCATGCTTGGCGACTCTGGGACGACAATCTT CTATCATTTTATCGTTTTCCCGCACTTGAATACTTCGATTGGCGCGGCAATGGCTATGATCATTCCCTAAACCTC TTTTCCTCCTTTATAATTTCCTTACCTCAATCTTGCCGTACCATCCAAATCTCCGCCGGCAAAGAAAACAATATG GTGATGAAGCTGCAAATTCTCCAATTAATCAAAAATCATCCCATCGATAAATTGATCTGCTCGCATTTCGATATC TTGTCTCTTCATATCATACTCGAGAGGCTTAAAGACTCAACTTTCATCCCGTCATTGAATTTTTTCAAATGGGAA CAAGGAGTCGGCTGTGATACGTACGAGTCTGATAGAATCTTTAAGCTCACTCGATTATTCAAAGATGTTCTGAGG TGTAGACATGAAATGGGTGTGGTGGGGTTTAGGATGGAGATAGATGGTTTGAGGACGAGGGTGCCGTATAATAAG CATGAGGTTTATAAGATTATGGAAGGGAGTGGGTTTGATATTGATATAGCGGAGGACGGTCGTTGGATAATGTCC ATAATGTCCCTCTAA
Transcript	>Agabi119p4|728800 ATGTCGCCCACCTCAACTGAAACATCGTCCCGCATGCTTTGCGGTTGCCAATGTAAAGGACATTGGTTCACTGTC GAAGCCCGGAAAGACGAACCCGACTTTATCTATGAAGATATTGAAAGGCTGAACGAGGTTATCGATCATTTTCGC ATACTCAAAGCCCAGCGTCTCCGCCAATTCAACAAAATTCATTCATCGATGAGAAACCTTCCTAATGAAATCCTT CTCTCTATTTTTGAACATTACTGTTCACTCGTCGGACCTCGAAAACACCCCGTACTCACGCTGGGAGCTGTATCC GCTCATTGGCGTGATCTAGTCGAGAATTCTTCTCAACTTTGGACGAGGTTTGATTTGGTTCTTTCTGATGAGATG CTTCCGGGGGCTGCTTCTTTGCTGGAAATGTATAGGGAGCATAACGGGTCGTCATTCGAGTCTATTCAGCTAGAC TTTCGAATGTTTAGCGCCGGCCGGCAGTGCAAGGAAAGAAGAAATCCCATACAGAGACTCGTACAGTCTATCAAA ACACTGGAGACATTCCCGAGAATCAAACTTCATCAACCTCCTGTTGACTTATTACGCATCTTAAACAATGATCTC AACGTCCCCGAGGTGCATTTGTCAAATCCACCCCATCTCGTCACTGGAGAAAAGACCATACCAAGATTCTCATTT CCTTGGTTGGCACTTACGACTCTCAAATTATGTCAAATCCAAGTCGATGTTTGTACCAACTTACTCCTTGGATGT CCGAATCTCGTCGAATTCTCGACTAACGATCCTTTACTTGCCACCGACGAATGTATTCGACCTACCTCTGACCAT GCTCATGCAATTTCTTTTCCCAAATTGCGATATTTATCGTGGTACCATGCTTGGCGACTCTGGGACGACAATCTT CTATCATTTTATCGTTTTCCCGCACTTGAATACTTCGATTGGCGCGGCAATGGCTATGATCATTCCCTAAACCTC TTTTCCTCCTTTATAATTTCCTTACCTCAATCTTGCCGTACCATCCAAATCTCCGCCGGCAAAGAAAACAATATG GTGATGAAGCTGCAAATTCTCCAATTAATCAAAAATCATCCCATCGATAAATTGATCTGCTCGCATTTCGATATC TTGTCTCTTCATATCATACTCGAGAGGCTTAAAGACTCAACTTTCATCCCGTCATTGAATTTTTTCAAATGGGAA CAAGGAGTCGGCTGTGATACGTACGAGTCTGATAGAATCTTTAAGCTCACTCGATTATTCAAAGATGTTCTGAGG TGTAGACATGAAATGGGTGTGGTGGGGTTTAGGATGGAGATAGATGGTTTGAGGACGAGGGTGCCGTATAATAAG CATGAGGTTTATAAGATTATGGAAGGGAGTGGGTTTGATATTGATATAGCGGAGGACGGTCGTTGGATAATGTCC ATAATGTCCCTCTAA
Gene	>Agabi119p4|728800 ATGTCGCCCACCTCAACTGAAACATCGTCCCGCATGCTTTGCGGTTGCCAATGTAAAGGACATTGGTTCACTGTC GAAGCCCGGAAAGACGAACCCGACTTTATCTATGAAGATATTGAAAGGCTGAACGAGGTTATCGATCATTTTCGC ATACTCAAAGCCCAGCGTCTCCGCCAATTCAACAAAATTCATTCATCGATGAGAAACCTTCCTAATGAAATCCTT CTCTCTATTTTTGAACATTACTGTTCACTCGTCGGACCTCGAAAACACCCCGTACTCACGCTGGGAGCTGTATCC GCTCATTGGCGTGATCTAGTCGAGAATTCTTCTCAACTTTGGACGAGGTTTGATTTGGTTCTTTCTGATGAGATG CTTCCGGGGGCTGCTTCTTTGCTGGAAATGTATAGGGAGCATAACGGGTCGTCATTCGAGTCTATTCAGCTAGAC TTTCGAATGTTTAGCGCCGGCCGGCAGTGCAAGGAAAGAAGAAATCCCATACAGAGACTCGTACAGTCTATCAAA ACACTGGAGACATTCCCGAGAATCAAACTTCATCAACCTCCTGTTGACTTATTACGCATCTTAAACAATGATCTC AACGTCCCCGAGGTGCATTTGTCAAATCCACCCCATCTCGTCACTGGAGAAAAGACCATACCAAGATTCTCATTT CCTTGGTTGGCACTTACGACTCTCAAATTATGTCAAATCCAAGTCGATGTTTGTACCAACTTACTCCTTGGATGT CCGAATCTCGTCGAATTCTCGACTAACGATCCTTTACTTGCCACCGACGAATGTATTCGACCTACCTCTGACCAT GCTCATGCAATTTCTTTTCCCAAATTGCGATATTTATCGTGGTACCATGCTTGGCGACTCTGGGACGACAATCTT CTATCATTTTATCGTTTTCCCGCACTTGAATACTTCGATTGGCGCGGCAATGGCTATGATCATTCCCTAAACCTC TTTTCCTCCTTTATAATTTCCTTACCTCAATCTTGCCGTACCATCCAAATCTCCGCCGGCAAAGAAAACAATATG GTGATGAAGCTGCAAATTCTCCAATTAATCAAAAATCATCCCATCGATAAATTGATCTGCTCGCATTTCGATATC TTGTCTCTTCATATCATACTCGAGAGGCTTAAAGACTCAACTTTCATCCCGTCATTGAATTTTTTCAAATGGGAA CAAGGAGTCGGCTGTGATACGTACGAGTCTGATAGAATCTTTAAGCTCACTCGATTATTCAAAGATGTTCTGAGG TGTAGACATGAAATGGGTGTGGTGGGGTTTAGGATGGAGATAGATGGTTTGAGGACGAGGGTGCCGTATAATAAG CATGAGGTTTATAAGATTATGGAAGGGAGTGGGTTTGATATTGATATAGCGGAGGACGGTCGTTGGATAATGTCC ATAATGTCCCTCTAA