Fungal Genomics

General Properties

Protein ID	Agabi119p4|727950
Gene name
Location	scaffold_10:281828..282096
Strand	+
Gene length (bp)	268
Transcript length (bp)	210
Coding sequence length (bp)	210
Protein length (aa)	70

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00646	F-box	F-box domain	2.2E-04	8	45

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0003674	molecular_function	No
GO:0005488	binding	No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	10738
Change Orthofinder run	5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var burnettii H119p4	Agabi119p4|727950 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|727950 MQRITDFLPLEVCESIALLLDLGTVLTLRCTCKMFLNATNSWRVWANLARYIALEPLFSVPDEPPQRRN*
Coding	>Agabi119p4|727950 ATGCAACGGATTACTGACTTTCTGCCCCTGGAGGTCTGTGAAAGCATCGCCCTCCTTCTTGACCTCGGCACCGTC CTCACACTACGATGCACCTGCAAGATGTTCCTCAATGCCACCAACTCGTGGAGAGTATGGGCAAACCTTGCGCGA TATATAGCGTTAGAGCCGCTTTTTTCTGTACCTGACGAACCTCCACAGCGTCGGAATTGA
Transcript	>Agabi119p4|727950 ATGCAACGGATTACTGACTTTCTGCCCCTGGAGGTCTGTGAAAGCATCGCCCTCCTTCTTGACCTCGGCACCGTC CTCACACTACGATGCACCTGCAAGATGTTCCTCAATGCCACCAACTCGTGGAGAGTATGGGCAAACCTTGCGCGA TATATAGCGTTAGAGCCGCTTTTTTCTGTACCTGACGAACCTCCACAGCGTCGGAATTGA
Gene	>Agabi119p4|727950 ATGCAACGGATTACTGACTTTCTGCCCCTGGAGGTCTGTGAAAGCATCGCCCTCCTTCTTGACCTCGGCACCGTC CTCACACTACGATGCGTATGTTTTTTTGTGTTTCTCTTTGTTCGGTCATAGATTAATCACGTTGTTACGCTAGAC CTGCAAGATGTTCCTCAATGCCACCAACTCGTGGAGAGTATGGGCAAACCTTGCGCGATATATAGCGTTAGAGCC GCTTTTTTCTGTACCTGACGAACCTCCACAGCGTCGGAATTGA