Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|727400
Gene name
Locationscaffold_10:120826..122242
Strand+
Gene length (bp)1416
Transcript length (bp)1416
Coding sequence length (bp)1416
Protein length (aa) 472

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12937 F-box-like F-box-like 1.1E-06 63 113

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID5
Orthogroup9659
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|473900
Agaricus bisporus var burnettii H119p4 Agabi119p4|727400 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|727400
MTENGACCIACGCQCKPRSPVISPDEDSLELISRDIEKLENIIHRVKSQRLRRLNATSSSVGNIPTEILLHIFQL
VCSATKTGQGTDSCPQIILGAVSSHWRDIVRSAPELWEMFTVKVSRRNLQNTLPLLQTYLDNNGASFDAVQLDFA
PGMQNLHGENSTLSLREILLPEENRSIRAIALYSPPIGWLPAVQRCRSIKNLFMSLSNWNLMGSETPPEFIGHLH
WSRSSLTVLHLKRVPINICFDALLGCPNLIKFGCIEPSRATRDCTRPSQYHTRNKVFPHLQSLSWHSANQHPWND
NLLEHYHFPAVRHLAWALLPGKYNWSYFYRFLSSLGPNIQSLELSTSPVIMNIARWFDLRVLDFPYMEELTFSDF
PLSLLPTILQKTVNVRSLMCFKWIHRRNDIGSIRPIIDQFHQFLQSQQEGGASLFRLEIARLNLPWTAEDRAKIS
RLMDVGDFKVEVVNDGVIMDL*
Coding >Agabi119p4|727400
ATGACAGAGAATGGAGCATGTTGCATTGCGTGCGGATGTCAATGCAAACCTCGCTCTCCGGTTATCTCTCCGGAT
GAAGACAGCTTGGAACTCATTTCAAGAGATATCGAAAAACTGGAGAACATAATCCACAGAGTCAAATCACAGCGG
CTTCGTCGATTGAACGCAACGTCTTCTTCAGTAGGGAATATCCCGACTGAAATTCTCCTACACATATTCCAATTG
GTATGCTCTGCCACCAAAACCGGCCAAGGCACCGATAGTTGTCCCCAGATCATCTTGGGAGCCGTCTCCAGCCAC
TGGCGTGACATCGTCCGAAGTGCTCCTGAGCTCTGGGAAATGTTTACTGTAAAAGTCTCTAGAAGGAATTTACAG
AATACGTTGCCCTTGCTACAGACATACCTAGACAATAACGGAGCATCTTTCGACGCCGTCCAGCTTGATTTTGCA
CCAGGTATGCAGAATCTGCATGGTGAAAATTCAACACTATCACTGAGAGAAATATTGTTGCCGGAGGAGAATAGA
AGTATCCGCGCCATCGCCCTTTATTCCCCTCCAATTGGTTGGCTGCCAGCCGTCCAAAGGTGTCGCAGTATCAAA
AACCTTTTCATGTCTTTGAGCAATTGGAATTTGATGGGATCAGAAACACCGCCAGAGTTCATAGGCCACCTTCAT
TGGTCTCGCTCATCCCTCACAGTCCTTCATCTGAAGCGGGTCCCCATCAACATTTGCTTCGACGCCCTCCTCGGA
TGCCCGAATCTTATTAAATTTGGTTGTATAGAACCGTCGCGAGCCACACGCGACTGCACACGACCTAGTCAATAT
CACACTCGGAATAAAGTGTTCCCTCATCTGCAATCCCTATCATGGCACTCCGCGAACCAGCATCCTTGGAACGAC
AACCTTCTTGAACACTATCATTTTCCAGCCGTCCGTCACCTAGCATGGGCTCTTCTGCCGGGGAAATACAATTGG
TCTTATTTCTATCGGTTCCTTTCCTCGCTGGGGCCGAACATCCAGAGCCTCGAGCTCTCTACGTCGCCCGTGATT
ATGAACATTGCACGATGGTTCGATCTACGTGTACTCGATTTTCCCTATATGGAGGAGTTAACCTTCTCAGATTTC
CCTTTATCCTTGCTACCTACCATACTTCAAAAAACTGTCAATGTTCGGTCGTTGATGTGCTTTAAATGGATCCAT
CGGAGAAATGATATTGGGTCTATCAGGCCCATCATCGACCAATTCCACCAGTTCCTACAGAGCCAACAAGAAGGT
GGCGCCTCCCTTTTCCGATTGGAAATAGCTCGTTTAAATTTGCCGTGGACAGCAGAGGATAGAGCAAAAATATCT
CGACTTATGGATGTCGGTGACTTCAAGGTTGAAGTTGTGAACGATGGCGTGATAATGGATTTGTGA
Transcript >Agabi119p4|727400
ATGACAGAGAATGGAGCATGTTGCATTGCGTGCGGATGTCAATGCAAACCTCGCTCTCCGGTTATCTCTCCGGAT
GAAGACAGCTTGGAACTCATTTCAAGAGATATCGAAAAACTGGAGAACATAATCCACAGAGTCAAATCACAGCGG
CTTCGTCGATTGAACGCAACGTCTTCTTCAGTAGGGAATATCCCGACTGAAATTCTCCTACACATATTCCAATTG
GTATGCTCTGCCACCAAAACCGGCCAAGGCACCGATAGTTGTCCCCAGATCATCTTGGGAGCCGTCTCCAGCCAC
TGGCGTGACATCGTCCGAAGTGCTCCTGAGCTCTGGGAAATGTTTACTGTAAAAGTCTCTAGAAGGAATTTACAG
AATACGTTGCCCTTGCTACAGACATACCTAGACAATAACGGAGCATCTTTCGACGCCGTCCAGCTTGATTTTGCA
CCAGGTATGCAGAATCTGCATGGTGAAAATTCAACACTATCACTGAGAGAAATATTGTTGCCGGAGGAGAATAGA
AGTATCCGCGCCATCGCCCTTTATTCCCCTCCAATTGGTTGGCTGCCAGCCGTCCAAAGGTGTCGCAGTATCAAA
AACCTTTTCATGTCTTTGAGCAATTGGAATTTGATGGGATCAGAAACACCGCCAGAGTTCATAGGCCACCTTCAT
TGGTCTCGCTCATCCCTCACAGTCCTTCATCTGAAGCGGGTCCCCATCAACATTTGCTTCGACGCCCTCCTCGGA
TGCCCGAATCTTATTAAATTTGGTTGTATAGAACCGTCGCGAGCCACACGCGACTGCACACGACCTAGTCAATAT
CACACTCGGAATAAAGTGTTCCCTCATCTGCAATCCCTATCATGGCACTCCGCGAACCAGCATCCTTGGAACGAC
AACCTTCTTGAACACTATCATTTTCCAGCCGTCCGTCACCTAGCATGGGCTCTTCTGCCGGGGAAATACAATTGG
TCTTATTTCTATCGGTTCCTTTCCTCGCTGGGGCCGAACATCCAGAGCCTCGAGCTCTCTACGTCGCCCGTGATT
ATGAACATTGCACGATGGTTCGATCTACGTGTACTCGATTTTCCCTATATGGAGGAGTTAACCTTCTCAGATTTC
CCTTTATCCTTGCTACCTACCATACTTCAAAAAACTGTCAATGTTCGGTCGTTGATGTGCTTTAAATGGATCCAT
CGGAGAAATGATATTGGGTCTATCAGGCCCATCATCGACCAATTCCACCAGTTCCTACAGAGCCAACAAGAAGGT
GGCGCCTCCCTTTTCCGATTGGAAATAGCTCGTTTAAATTTGCCGTGGACAGCAGAGGATAGAGCAAAAATATCT
CGACTTATGGATGTCGGTGACTTCAAGGTTGAAGTTGTGAACGATGGCGTGATAATGGATTTGTGA
Gene >Agabi119p4|727400
ATGACAGAGAATGGAGCATGTTGCATTGCGTGCGGATGTCAATGCAAACCTCGCTCTCCGGTTATCTCTCCGGAT
GAAGACAGCTTGGAACTCATTTCAAGAGATATCGAAAAACTGGAGAACATAATCCACAGAGTCAAATCACAGCGG
CTTCGTCGATTGAACGCAACGTCTTCTTCAGTAGGGAATATCCCGACTGAAATTCTCCTACACATATTCCAATTG
GTATGCTCTGCCACCAAAACCGGCCAAGGCACCGATAGTTGTCCCCAGATCATCTTGGGAGCCGTCTCCAGCCAC
TGGCGTGACATCGTCCGAAGTGCTCCTGAGCTCTGGGAAATGTTTACTGTAAAAGTCTCTAGAAGGAATTTACAG
AATACGTTGCCCTTGCTACAGACATACCTAGACAATAACGGAGCATCTTTCGACGCCGTCCAGCTTGATTTTGCA
CCAGGTATGCAGAATCTGCATGGTGAAAATTCAACACTATCACTGAGAGAAATATTGTTGCCGGAGGAGAATAGA
AGTATCCGCGCCATCGCCCTTTATTCCCCTCCAATTGGTTGGCTGCCAGCCGTCCAAAGGTGTCGCAGTATCAAA
AACCTTTTCATGTCTTTGAGCAATTGGAATTTGATGGGATCAGAAACACCGCCAGAGTTCATAGGCCACCTTCAT
TGGTCTCGCTCATCCCTCACAGTCCTTCATCTGAAGCGGGTCCCCATCAACATTTGCTTCGACGCCCTCCTCGGA
TGCCCGAATCTTATTAAATTTGGTTGTATAGAACCGTCGCGAGCCACACGCGACTGCACACGACCTAGTCAATAT
CACACTCGGAATAAAGTGTTCCCTCATCTGCAATCCCTATCATGGCACTCCGCGAACCAGCATCCTTGGAACGAC
AACCTTCTTGAACACTATCATTTTCCAGCCGTCCGTCACCTAGCATGGGCTCTTCTGCCGGGGAAATACAATTGG
TCTTATTTCTATCGGTTCCTTTCCTCGCTGGGGCCGAACATCCAGAGCCTCGAGCTCTCTACGTCGCCCGTGATT
ATGAACATTGCACGATGGTTCGATCTACGTGTACTCGATTTTCCCTATATGGAGGAGTTAACCTTCTCAGATTTC
CCTTTATCCTTGCTACCTACCATACTTCAAAAAACTGTCAATGTTCGGTCGTTGATGTGCTTTAAATGGATCCAT
CGGAGAAATGATATTGGGTCTATCAGGCCCATCATCGACCAATTCCACCAGTTCCTACAGAGCCAACAAGAAGGT
GGCGCCTCCCTTTTCCGATTGGAAATAGCTCGTTTAAATTTGCCGTGGACAGCAGAGGATAGAGCAAAAATATCT
CGACTTATGGATGTCGGTGACTTCAAGGTTGAAGTTGTGAACGATGGCGTGATAATGGATTTGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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