Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|723100
Gene name
Locationscaffold_09:1637403..1638171
Strand-
Gene length (bp)768
Transcript length (bp)768
Coding sequence length (bp)768
Protein length (aa) 256

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12937 F-box-like F-box-like 3.5E-06 9 58

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|723100
MPFASLLFELLVRICRINAHRWQNYSFDTRKPLQDTIAASQVCSHWRSIILSAPELWRFAIDPCHPCASWRDLVL
KRSEPLSIEFIDAAHASRVGRPVHDIQLQMQSGMHQRLRRYHIWLDYRTETITNHSPLWPSDPGSWPRLQRLRLM
FDCDTADDPDSHPQGILPNHFPGLATPILKRLSLTSCCMPDWNELWTIGNTLTHLEIYHPPSRLCADRWIELVRN
LPNIMSFELSFAVGSVLQSSKLQGTFHPWC*
Coding >Agabi119p4|723100
ATGCCCTTCGCCAGTCTCCTCTTCGAGCTCCTTGTCCGCATATGTCGTATAAACGCCCACCGCTGGCAGAATTAT
TCCTTCGATACCCGAAAGCCACTACAGGACACCATAGCAGCGTCCCAAGTCTGCAGTCATTGGCGGTCTATCATT
CTCTCAGCTCCCGAACTATGGAGGTTTGCTATCGACCCTTGTCATCCTTGCGCGTCGTGGAGGGATCTGGTGCTT
AAACGTTCTGAGCCTTTGTCCATTGAGTTTATAGATGCAGCCCATGCGTCAAGGGTCGGACGACCTGTACATGAT
ATCCAACTTCAAATGCAATCTGGAATGCATCAGCGACTCCGAAGATATCATATATGGCTCGACTACAGAACGGAG
ACTATCACAAATCATTCACCCCTCTGGCCTTCTGATCCTGGTTCTTGGCCTCGACTGCAACGTCTCCGCTTGATG
TTTGATTGCGATACAGCAGACGATCCCGACTCGCACCCCCAAGGAATTCTCCCAAATCATTTTCCTGGCTTAGCA
ACTCCCATTCTCAAGCGCCTTTCCCTCACTTCGTGCTGCATGCCTGACTGGAACGAGCTTTGGACCATTGGGAAC
ACCCTCACACATCTTGAAATTTACCACCCACCCTCTCGTTTATGTGCGGACCGTTGGATTGAACTCGTTCGAAAC
CTTCCGAATATAATGAGCTTCGAATTGTCGTTTGCAGTGGGAAGCGTTTTGCAATCATCCAAACTGCAAGGAACG
TTTCACCCTTGGTGTTAA
Transcript >Agabi119p4|723100
ATGCCCTTCGCCAGTCTCCTCTTCGAGCTCCTTGTCCGCATATGTCGTATAAACGCCCACCGCTGGCAGAATTAT
TCCTTCGATACCCGAAAGCCACTACAGGACACCATAGCAGCGTCCCAAGTCTGCAGTCATTGGCGGTCTATCATT
CTCTCAGCTCCCGAACTATGGAGGTTTGCTATCGACCCTTGTCATCCTTGCGCGTCGTGGAGGGATCTGGTGCTT
AAACGTTCTGAGCCTTTGTCCATTGAGTTTATAGATGCAGCCCATGCGTCAAGGGTCGGACGACCTGTACATGAT
ATCCAACTTCAAATGCAATCTGGAATGCATCAGCGACTCCGAAGATATCATATATGGCTCGACTACAGAACGGAG
ACTATCACAAATCATTCACCCCTCTGGCCTTCTGATCCTGGTTCTTGGCCTCGACTGCAACGTCTCCGCTTGATG
TTTGATTGCGATACAGCAGACGATCCCGACTCGCACCCCCAAGGAATTCTCCCAAATCATTTTCCTGGCTTAGCA
ACTCCCATTCTCAAGCGCCTTTCCCTCACTTCGTGCTGCATGCCTGACTGGAACGAGCTTTGGACCATTGGGAAC
ACCCTCACACATCTTGAAATTTACCACCCACCCTCTCGTTTATGTGCGGACCGTTGGATTGAACTCGTTCGAAAC
CTTCCGAATATAATGAGCTTCGAATTGTCGTTTGCAGTGGGAAGCGTTTTGCAATCATCCAAACTGCAAGGAACG
TTTCACCCTTGGTGTTAA
Gene >Agabi119p4|723100
ATGCCCTTCGCCAGTCTCCTCTTCGAGCTCCTTGTCCGCATATGTCGTATAAACGCCCACCGCTGGCAGAATTAT
TCCTTCGATACCCGAAAGCCACTACAGGACACCATAGCAGCGTCCCAAGTCTGCAGTCATTGGCGGTCTATCATT
CTCTCAGCTCCCGAACTATGGAGGTTTGCTATCGACCCTTGTCATCCTTGCGCGTCGTGGAGGGATCTGGTGCTT
AAACGTTCTGAGCCTTTGTCCATTGAGTTTATAGATGCAGCCCATGCGTCAAGGGTCGGACGACCTGTACATGAT
ATCCAACTTCAAATGCAATCTGGAATGCATCAGCGACTCCGAAGATATCATATATGGCTCGACTACAGAACGGAG
ACTATCACAAATCATTCACCCCTCTGGCCTTCTGATCCTGGTTCTTGGCCTCGACTGCAACGTCTCCGCTTGATG
TTTGATTGCGATACAGCAGACGATCCCGACTCGCACCCCCAAGGAATTCTCCCAAATCATTTTCCTGGCTTAGCA
ACTCCCATTCTCAAGCGCCTTTCCCTCACTTCGTGCTGCATGCCTGACTGGAACGAGCTTTGGACCATTGGGAAC
ACCCTCACACATCTTGAAATTTACCACCCACCCTCTCGTTTATGTGCGGACCGTTGGATTGAACTCGTTCGAAAC
CTTCCGAATATAATGAGCTTCGAATTGTCGTTTGCAGTGGGAAGCGTTTTGCAATCATCCAAACTGCAAGGAACG
TTTCACCCTTGGTGTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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