Fungal Genomics

at Utrecht University

General Properties

Protein ID	Agabi119p4\|713100
Gene name
Location	scaffold_09:746494..747298
Strand	-
Gene length (bp)	804
Transcript length (bp)	696
Coding sequence length (bp)	696
Protein length (aa)	232

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00011	HSP20	Hsp20/alpha crystallin family	6.3E-08	156	205
PF17886	ArsA_HSP20	HSP20-like domain found in ArsA	1.1E-05	79	199

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 52	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4\|713100 MSPTTSSPVPSKSNSFASFYQDPRFRTAVSRAAQLKVHQLIEAGSLRPGRPERDCRGNWKPRMDLVDDPSSPNII AIFELPGVKNENISLQIKEKRLMVFGKRVDPYSEALSAALAAVSSSQDQKSARTGATEVDQASSRGNARSSPPPN SQDPAVKSSTSRSIHELRYGSFFRSVTVPEGIKQSEVTAGIQDGMLTVTWPRIPAGARHFSATKISDTPIETMAN QPMLRA*
Coding	>Agabi119p4\|713100 ATGTCCCCGACAACCTCTTCCCCAGTTCCTTCAAAGTCCAACTCATTCGCCTCTTTTTACCAAGACCCGCGTTTT CGCACTGCCGTATCCCGAGCTGCTCAACTAAAGGTCCACCAACTTATTGAAGCGGGCTCTCTTCGTCCTGGCCGA CCAGAGAGAGACTGTCGTGGCAATTGGAAACCGAGAATGGATCTAGTTGATGACCCGTCCTCTCCAAATATCATC GCCATATTCGAGCTCCCTGGAGTCAAAAATGAGAACATTTCGCTCCAGATTAAAGAGAAACGACTGATGGTATTT GGGAAAAGAGTAGATCCTTACTCAGAAGCGCTTTCAGCGGCTTTAGCTGCCGTCTCAAGCTCCCAAGATCAAAAG TCAGCCCGGACTGGCGCCACTGAAGTCGACCAAGCCTCCTCTCGCGGAAACGCGAGAAGTTCTCCTCCTCCCAAC TCTCAGGATCCGGCAGTCAAGTCTTCGACTTCCAGGTCCATTCATGAATTGCGATACGGATCGTTTTTCCGTAGC GTAACAGTACCAGAGGGTATCAAGCAATCTGAAGTCACTGCAGGCATTCAGGATGGTATGTTAACCGTGACATGG CCACGAATACCTGCGGGCGCCAGGCATTTTAGCGCCACAAAGATATCTGATACCCCCATTGAAACGATGGCAAAT CAACCAATGCTACGTGCATAA
Transcript	>Agabi119p4\|713100 ATGTCCCCGACAACCTCTTCCCCAGTTCCTTCAAAGTCCAACTCATTCGCCTCTTTTTACCAAGACCCGCGTTTT CGCACTGCCGTATCCCGAGCTGCTCAACTAAAGGTCCACCAACTTATTGAAGCGGGCTCTCTTCGTCCTGGCCGA CCAGAGAGAGACTGTCGTGGCAATTGGAAACCGAGAATGGATCTAGTTGATGACCCGTCCTCTCCAAATATCATC GCCATATTCGAGCTCCCTGGAGTCAAAAATGAGAACATTTCGCTCCAGATTAAAGAGAAACGACTGATGGTATTT GGGAAAAGAGTAGATCCTTACTCAGAAGCGCTTTCAGCGGCTTTAGCTGCCGTCTCAAGCTCCCAAGATCAAAAG TCAGCCCGGACTGGCGCCACTGAAGTCGACCAAGCCTCCTCTCGCGGAAACGCGAGAAGTTCTCCTCCTCCCAAC TCTCAGGATCCGGCAGTCAAGTCTTCGACTTCCAGGTCCATTCATGAATTGCGATACGGATCGTTTTTCCGTAGC GTAACAGTACCAGAGGGTATCAAGCAATCTGAAGTCACTGCAGGCATTCAGGATGGTATGTTAACCGTGACATGG CCACGAATACCTGCGGGCGCCAGGCATTTTAGCGCCACAAAGATATCTGATACCCCCATTGAAACGATGGCAAAT CAACCAATGCTACGTGCATAA
Gene	>Agabi119p4\|713100 ATGTCCCCGACAACCTCTTCCCCAGTTCCTTCAAAGTCCAACTCATTCGCCTCTTTTTACCAAGACCCGCGTTTT CGCACTGCCGTATCCCGAGCTGCTCAACTAAAGGTCCACCAACTTATTGAAGCGGGCTCTCTTCGTCCTGGCCGA CCAGAGAGAGACTGTCGTGGCAATTGGAAACCGAGGTATGGCTATAGACAAGGCTCTTCCACCTCGTCTGATTAA CGAACTTACAGAATGGATCTAGTTGATGACCCGTCCTCTCCAAATATCATCGCCATATTCGAGCTCCCTGGAGTC AAAAATGAGAACATTTCGCTCCAGATTAAAGAGAAACGACTGATGGTATTTGGGAAAAGAGTAGATCCTTACTCA GAAGCGCTTTCAGCGGCTTTAGCTGCCGTCTCAAGCTCCCAAGATCAAAAGTCAGCCCGGACTGGCGCCACTGAA GTCGACCAAGCCTCCTCTCGCGGAAACGCGAGAAGTTCTCCTCCTCCCAACTCTCAGGATCCGGCAGTCAAGTCT TCGACTTCCAGGTCCATTCATGAATTGCGATACGGATCGTTTTTCCGTAGCGTAACAGTACCAGAGGGTATCAAG GTATGAGTCGCTTACTTGCAATTGATTTAATCCCGAGTCACTAATCGTCCTTTCTAGCAATCTGAAGTCACTGCA GGCATTCAGGATGGTATGTTAACCGTGACATGGCCACGAATACCTGCGGGCGCCAGGCATTTTAGCGCCACAAAG ATATCTGATACCCCCATTGAAACGATGGCAAATCAACCAATGCTACGTGCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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