Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|713100
Gene name
Locationscaffold_09:746494..747298
Strand-
Gene length (bp)804
Transcript length (bp)696
Coding sequence length (bp)696
Protein length (aa) 232

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00011 HSP20 Hsp20/alpha crystallin family 6.3E-08 156 205
PF17886 ArsA_HSP20 HSP20-like domain found in ArsA 1.1E-05 79 199

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 52 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|713100
MSPTTSSPVPSKSNSFASFYQDPRFRTAVSRAAQLKVHQLIEAGSLRPGRPERDCRGNWKPRMDLVDDPSSPNII
AIFELPGVKNENISLQIKEKRLMVFGKRVDPYSEALSAALAAVSSSQDQKSARTGATEVDQASSRGNARSSPPPN
SQDPAVKSSTSRSIHELRYGSFFRSVTVPEGIKQSEVTAGIQDGMLTVTWPRIPAGARHFSATKISDTPIETMAN
QPMLRA*
Coding >Agabi119p4|713100
ATGTCCCCGACAACCTCTTCCCCAGTTCCTTCAAAGTCCAACTCATTCGCCTCTTTTTACCAAGACCCGCGTTTT
CGCACTGCCGTATCCCGAGCTGCTCAACTAAAGGTCCACCAACTTATTGAAGCGGGCTCTCTTCGTCCTGGCCGA
CCAGAGAGAGACTGTCGTGGCAATTGGAAACCGAGAATGGATCTAGTTGATGACCCGTCCTCTCCAAATATCATC
GCCATATTCGAGCTCCCTGGAGTCAAAAATGAGAACATTTCGCTCCAGATTAAAGAGAAACGACTGATGGTATTT
GGGAAAAGAGTAGATCCTTACTCAGAAGCGCTTTCAGCGGCTTTAGCTGCCGTCTCAAGCTCCCAAGATCAAAAG
TCAGCCCGGACTGGCGCCACTGAAGTCGACCAAGCCTCCTCTCGCGGAAACGCGAGAAGTTCTCCTCCTCCCAAC
TCTCAGGATCCGGCAGTCAAGTCTTCGACTTCCAGGTCCATTCATGAATTGCGATACGGATCGTTTTTCCGTAGC
GTAACAGTACCAGAGGGTATCAAGCAATCTGAAGTCACTGCAGGCATTCAGGATGGTATGTTAACCGTGACATGG
CCACGAATACCTGCGGGCGCCAGGCATTTTAGCGCCACAAAGATATCTGATACCCCCATTGAAACGATGGCAAAT
CAACCAATGCTACGTGCATAA
Transcript >Agabi119p4|713100
ATGTCCCCGACAACCTCTTCCCCAGTTCCTTCAAAGTCCAACTCATTCGCCTCTTTTTACCAAGACCCGCGTTTT
CGCACTGCCGTATCCCGAGCTGCTCAACTAAAGGTCCACCAACTTATTGAAGCGGGCTCTCTTCGTCCTGGCCGA
CCAGAGAGAGACTGTCGTGGCAATTGGAAACCGAGAATGGATCTAGTTGATGACCCGTCCTCTCCAAATATCATC
GCCATATTCGAGCTCCCTGGAGTCAAAAATGAGAACATTTCGCTCCAGATTAAAGAGAAACGACTGATGGTATTT
GGGAAAAGAGTAGATCCTTACTCAGAAGCGCTTTCAGCGGCTTTAGCTGCCGTCTCAAGCTCCCAAGATCAAAAG
TCAGCCCGGACTGGCGCCACTGAAGTCGACCAAGCCTCCTCTCGCGGAAACGCGAGAAGTTCTCCTCCTCCCAAC
TCTCAGGATCCGGCAGTCAAGTCTTCGACTTCCAGGTCCATTCATGAATTGCGATACGGATCGTTTTTCCGTAGC
GTAACAGTACCAGAGGGTATCAAGCAATCTGAAGTCACTGCAGGCATTCAGGATGGTATGTTAACCGTGACATGG
CCACGAATACCTGCGGGCGCCAGGCATTTTAGCGCCACAAAGATATCTGATACCCCCATTGAAACGATGGCAAAT
CAACCAATGCTACGTGCATAA
Gene >Agabi119p4|713100
ATGTCCCCGACAACCTCTTCCCCAGTTCCTTCAAAGTCCAACTCATTCGCCTCTTTTTACCAAGACCCGCGTTTT
CGCACTGCCGTATCCCGAGCTGCTCAACTAAAGGTCCACCAACTTATTGAAGCGGGCTCTCTTCGTCCTGGCCGA
CCAGAGAGAGACTGTCGTGGCAATTGGAAACCGAGGTATGGCTATAGACAAGGCTCTTCCACCTCGTCTGATTAA
CGAACTTACAGAATGGATCTAGTTGATGACCCGTCCTCTCCAAATATCATCGCCATATTCGAGCTCCCTGGAGTC
AAAAATGAGAACATTTCGCTCCAGATTAAAGAGAAACGACTGATGGTATTTGGGAAAAGAGTAGATCCTTACTCA
GAAGCGCTTTCAGCGGCTTTAGCTGCCGTCTCAAGCTCCCAAGATCAAAAGTCAGCCCGGACTGGCGCCACTGAA
GTCGACCAAGCCTCCTCTCGCGGAAACGCGAGAAGTTCTCCTCCTCCCAACTCTCAGGATCCGGCAGTCAAGTCT
TCGACTTCCAGGTCCATTCATGAATTGCGATACGGATCGTTTTTCCGTAGCGTAACAGTACCAGAGGGTATCAAG
GTATGAGTCGCTTACTTGCAATTGATTTAATCCCGAGTCACTAATCGTCCTTTCTAGCAATCTGAAGTCACTGCA
GGCATTCAGGATGGTATGTTAACCGTGACATGGCCACGAATACCTGCGGGCGCCAGGCATTTTAGCGCCACAAAG
ATATCTGATACCCCCATTGAAACGATGGCAAATCAACCAATGCTACGTGCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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