Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|704950
Gene name
Locationscaffold_08:1723832..1724359
Strand+
Gene length (bp)527
Transcript length (bp)417
Coding sequence length (bp)417
Protein length (aa) 139

Overview

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PFAM Domains

(None)

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|P06914|CSP_PLAYO Circumsporozoite protein OS=Plasmodium yoelii yoelii PE=1 SV=1 34 128 1.0E-07
sp|Q95P23|ENPP_APLCA Enterin neuropeptides OS=Aplysia californica GN=ENPP PE=1 SV=1 44 133 5.0E-07
sp|Q95P23|ENPP_APLCA Enterin neuropeptides OS=Aplysia californica GN=ENPP PE=1 SV=1 44 133 5.0E-07
sp|Q95P23|ENPP_APLCA Enterin neuropeptides OS=Aplysia californica GN=ENPP PE=1 SV=1 43 133 5.0E-07
sp|Q95P23|ENPP_APLCA Enterin neuropeptides OS=Aplysia californica GN=ENPP PE=1 SV=1 44 133 2.0E-06
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|P06914|CSP_PLAYO Circumsporozoite protein OS=Plasmodium yoelii yoelii PE=1 SV=1 34 128 1.0E-07
sp|Q95P23|ENPP_APLCA Enterin neuropeptides OS=Aplysia californica GN=ENPP PE=1 SV=1 44 133 5.0E-07
sp|Q95P23|ENPP_APLCA Enterin neuropeptides OS=Aplysia californica GN=ENPP PE=1 SV=1 44 133 5.0E-07
sp|Q95P23|ENPP_APLCA Enterin neuropeptides OS=Aplysia californica GN=ENPP PE=1 SV=1 43 133 5.0E-07
sp|Q95P23|ENPP_APLCA Enterin neuropeptides OS=Aplysia californica GN=ENPP PE=1 SV=1 44 133 2.0E-06
sp|Q95P23|ENPP_APLCA Enterin neuropeptides OS=Aplysia californica GN=ENPP PE=1 SV=1 44 133 5.0E-06
[Show less]

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

SignalP signal predicted Location Score
Yes 1 - 20 0.999721

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID5
Orthogroup8752
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|453700
Agaricus bisporus var bisporus H97 AgabiH97|112920
Agaricus bisporus var burnettii H119p4 Agabi119p4|704950 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|704950
MRSLTFFALIASVLAATVTAVPLENSNLPGRDVDLETSATPGAPGWKRSEQGPGAPGWKRSEQGPGAPGWKRKEQ
GPGAPGWKREEQGPGAPGWKRKEQGPGAPGWKRSEQGPGAPGWKRKEQGPGAPGWKRTEDIPA*
Coding >Agabi119p4|704950
ATGCGTTCTTTGACTTTTTTTGCTCTGATTGCTTCCGTTCTTGCGGCCACGGTCACTGCTGTGCCTCTGGAGAAC
TCGAATCTCCCCGGTCGTGATGTAGACTTGGAGACGTCAGCTACTCCTGGTGCCCCTGGTTGGAAGCGCAGTGAA
CAGGGTCCAGGCGCTCCTGGATGGAAGCGCAGTGAACAAGGTCCCGGTGCTCCGGGGTGGAAGCGCAAAGAACAA
GGTCCCGGTGCTCCGGGGTGGAAACGCGAAGAACAAGGTCCAGGTGCTCCTGGATGGAAGCGCAAAGAACAAGGC
CCGGGTGCTCCTGGTTGGAAACGCAGTGAACAAGGTCCAGGCGCTCCGGGGTGGAAGCGTAAGGAACAGGGTCCT
GGTGCTCCTGGTTGGAAGCGCACTGAGGATATTCCTGCCTAA
Transcript >Agabi119p4|704950
ATGCGTTCTTTGACTTTTTTTGCTCTGATTGCTTCCGTTCTTGCGGCCACGGTCACTGCTGTGCCTCTGGAGAAC
TCGAATCTCCCCGGTCGTGATGTAGACTTGGAGACGTCAGCTACTCCTGGTGCCCCTGGTTGGAAGCGCAGTGAA
CAGGGTCCAGGCGCTCCTGGATGGAAGCGCAGTGAACAAGGTCCCGGTGCTCCGGGGTGGAAGCGCAAAGAACAA
GGTCCCGGTGCTCCGGGGTGGAAACGCGAAGAACAAGGTCCAGGTGCTCCTGGATGGAAGCGCAAAGAACAAGGC
CCGGGTGCTCCTGGTTGGAAACGCAGTGAACAAGGTCCAGGCGCTCCGGGGTGGAAGCGTAAGGAACAGGGTCCT
GGTGCTCCTGGTTGGAAGCGCACTGAGGATATTCCTGCCTAA
Gene >Agabi119p4|704950
ATGCGTTCTTTGACTTTTTTTGCTCTGATTGCTTCCGTTCTTGCGGCCACGGTCACTGCTGTGCCTCTGGTATGT
TAGATCTTTGAATCCTTCTATTTTGCCCCTCGTTTACCCTACCTGTAGGAGAACTCGAATCTCCCCGGTCGTGAT
GTAGACTTGGAGACGTCAGCTACTGTTGGTTTATTTTTCTCTCCGGCGCCTTATCTATTTAATCACATTCGTGCT
CTCAGCCTGGTGCCCCTGGTTGGAAGCGCAGTGAACAGGGTCCAGGCGCTCCTGGATGGAAGCGCAGTGAACAAG
GTCCCGGTGCTCCGGGGTGGAAGCGCAAAGAACAAGGTCCCGGTGCTCCGGGGTGGAAACGCGAAGAACAAGGTC
CAGGTGCTCCTGGATGGAAGCGCAAAGAACAAGGCCCGGGTGCTCCTGGTTGGAAACGCAGTGAACAAGGTCCAG
GCGCTCCGGGGTGGAAGCGTAAGGAACAGGGTCCTGGTGCTCCTGGTTGGAAGCGCACTGAGGATATTCCTGCCT
AA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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