Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|695400
Gene name
Locationscaffold_08:473591..476086
Strand+
Gene length (bp)2495
Transcript length (bp)1842
Coding sequence length (bp)1842
Protein length (aa) 614

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00728 Glyco_hydro_20 Glycosyl hydrolase family 20, catalytic domain 2.7E-92 149 481
PF14845 Glycohydro_20b2 beta-acetyl hexosaminidase like 2.8E-10 3 126

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q9SYK0|HEXO2_ARATH Beta-hexosaminidase 2 OS=Arabidopsis thaliana GN=HEXO2 PE=1 SV=1 6 523 7.0E-102
sp|D4AUH6|HEX1_ARTBC Beta-hexosaminidase ARB_07893 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07893 PE=1 SV=1 92 524 2.0E-87
sp|P49010|HEXC_BOMMO Chitooligosaccharidolytic beta-N-acetylglucosaminidase OS=Bombyx mori PE=1 SV=1 10 522 8.0E-86
sp|E9DFH0|HEX1_COCPS Beta-hexosaminidase 1 OS=Coccidioides posadasii (strain RMSCC 757 / Silveira) GN=HEX1 PE=1 SV=1 92 524 5.0E-82
sp|P43077|HEX1_CANAX Beta-hexosaminidase OS=Candida albicans GN=HEX1 PE=1 SV=1 92 524 1.0E-74
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q9SYK0|HEXO2_ARATH Beta-hexosaminidase 2 OS=Arabidopsis thaliana GN=HEXO2 PE=1 SV=1 6 523 7.0E-102
sp|D4AUH6|HEX1_ARTBC Beta-hexosaminidase ARB_07893 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07893 PE=1 SV=1 92 524 2.0E-87
sp|P49010|HEXC_BOMMO Chitooligosaccharidolytic beta-N-acetylglucosaminidase OS=Bombyx mori PE=1 SV=1 10 522 8.0E-86
sp|E9DFH0|HEX1_COCPS Beta-hexosaminidase 1 OS=Coccidioides posadasii (strain RMSCC 757 / Silveira) GN=HEX1 PE=1 SV=1 92 524 5.0E-82
sp|P43077|HEX1_CANAX Beta-hexosaminidase OS=Candida albicans GN=HEX1 PE=1 SV=1 92 524 1.0E-74
sp|Q8WSF3|FDL_DROME Probable beta-hexosaminidase fdl OS=Drosophila melanogaster GN=fdl PE=1 SV=1 92 522 1.0E-73
sp|D4AYT4|HEX2_ARTBC Probable beta-hexosaminidase ARB_01353 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_01353 PE=1 SV=1 92 524 4.0E-73
sp|A7WM73|HEXO1_ARATH Beta-hexosaminidase 1 OS=Arabidopsis thaliana GN=HEXO1 PE=1 SV=1 40 522 7.0E-72
sp|P07686|HEXB_HUMAN Beta-hexosaminidase subunit beta OS=Homo sapiens GN=HEXB PE=1 SV=3 90 515 3.0E-65
sp|P06865|HEXA_HUMAN Beta-hexosaminidase subunit alpha OS=Homo sapiens GN=HEXA PE=1 SV=2 25 515 2.0E-63
sp|P49614|HEXB_FELCA Beta-hexosaminidase subunit beta OS=Felis catus GN=HEXB PE=2 SV=2 92 515 3.0E-63
sp|Q5RC84|HEXA_PONAB Beta-hexosaminidase subunit alpha OS=Pongo abelii GN=HEXA PE=3 SV=1 25 515 4.0E-63
sp|Q8L7S6|HEXO3_ARATH Beta-hexosaminidase 3 OS=Arabidopsis thaliana GN=HEXO3 PE=1 SV=1 1 522 1.0E-62
sp|P20060|HEXB_MOUSE Beta-hexosaminidase subunit beta OS=Mus musculus GN=Hexb PE=1 SV=2 90 515 3.0E-62
sp|Q0V8R6|HEXA_BOVIN Beta-hexosaminidase subunit alpha OS=Bos taurus GN=HEXA PE=2 SV=1 93 518 8.0E-62
sp|Q54K55|HEXB1_DICDI Beta-hexosaminidase subunit B1 OS=Dictyostelium discoideum GN=hexb1 PE=3 SV=1 59 511 1.0E-61
sp|P13723|HEXA1_DICDI Beta-hexosaminidase subunit A1 OS=Dictyostelium discoideum GN=hexa1 PE=1 SV=1 77 530 5.0E-60
sp|P29416|HEXA_MOUSE Beta-hexosaminidase subunit alpha OS=Mus musculus GN=Hexa PE=1 SV=2 93 515 2.0E-59
sp|Q6AXR4|HEXB_RAT Beta-hexosaminidase subunit beta OS=Rattus norvegicus GN=Hexb PE=2 SV=1 68 515 4.0E-59
sp|Q54K56|HEXB2_DICDI Beta-hexosaminidase subunit B2 OS=Dictyostelium discoideum GN=hexb2 PE=3 SV=1 22 511 2.0E-58
sp|Q641X3|HEXA_RAT Beta-hexosaminidase subunit alpha OS=Rattus norvegicus GN=Hexa PE=2 SV=1 93 515 2.0E-58
sp|Q29548|HEXB_PIG Beta-hexosaminidase subunit beta OS=Sus scrofa GN=HEXB PE=1 SV=2 90 528 7.0E-57
sp|Q54SC9|HEXA2_DICDI Beta-hexosaminidase subunit A2 OS=Dictyostelium discoideum GN=hexa2 PE=3 SV=1 49 517 2.0E-56
sp|Q619W7|HEXA_CAEBR Beta-hexosaminidase A OS=Caenorhabditis briggsae GN=hex-1 PE=3 SV=2 76 515 3.0E-52
sp|Q22492|HEXA_CAEEL Beta-hexosaminidase A OS=Caenorhabditis elegans GN=hex-1 PE=1 SV=1 76 515 5.0E-49
sp|P49008|HEXA_PORGI Beta-hexosaminidase OS=Porphyromonas gingivalis (strain ATCC BAA-308 / W83) GN=nahA PE=3 SV=2 91 512 8.0E-44
sp|Q86M34|HEXB_ENTHI Beta-hexosaminidase subunit beta OS=Entamoeba histolytica GN=HEXB PE=1 SV=1 37 502 1.0E-42
sp|P49009|HEXA_ENTHI Beta-hexosaminidase subunit alpha OS=Entamoeba histolytica GN=HEXA PE=1 SV=2 92 480 1.0E-37
sp|P96155|HEX1_VIBFU Beta-hexosaminidase OS=Vibrio furnissii GN=exo I PE=1 SV=1 92 475 4.0E-34
sp|Q7WUL4|HEX20_CELFI Beta-N-acetylhexosaminidase OS=Cellulomonas fimi GN=hex20 PE=1 SV=1 80 482 3.0E-27
sp|Q54468|CHB_SERMA Chitobiase OS=Serratia marcescens GN=chb PE=1 SV=1 115 289 4.0E-17
sp|Q04786|HEX_VIBVL Beta-hexosaminidase OS=Vibrio vulnificus GN=hex PE=3 SV=1 63 250 5.0E-14
sp|P13670|CHB_VIBHA N,N'-diacetylchitobiase OS=Vibrio harveyi GN=chb PE=1 SV=1 141 479 2.0E-13
sp|P49007|HEXB_PSEO7 Beta-hexosaminidase B OS=Pseudoalteromonas piscicida GN=nag096 PE=3 SV=1 50 244 2.0E-11
[Show less]

GO

GO Term Description Terminal node
GO:0005975 carbohydrate metabolic process Yes
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds Yes
GO:0016787 hydrolase activity No
GO:0003824 catalytic activity No
GO:0044238 primary metabolic process No
GO:0071704 organic substance metabolic process No
GO:0008150 biological_process No
GO:0008152 metabolic process No
GO:0016798 hydrolase activity, acting on glycosyl bonds No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 562 584 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|695400
MTSGTKPLRLSPKFTIKFSQKVTKDISDAAQRTTKFLKTDRLRALVPDRGASLSGVLHSANVLHTLTVNLTPSNG
VITSLSEEVMKGIGAQDESYWLEVPADGNTAFLSANTALGVFRGLTTFEQLWYDLDGVVYTTQAPVQIEDAPAYP
YRGFMLDTSRNFFPVEDIKRTLDAMSWVKINHFHWHVVDSQSFPLVVPRFEEISSKGAYSSAEVYMPQDVKDIVE
YAAARGIDVMVEIDIPGHTAVISKSYPLHVACPEATPWSHFANEPPAGQLRITSPSTVSFTTDLIRAVSSMFPSK
LFSTGGDEVNMNCYKKDWLTQRDLGAQGKNIEQALDSFTQATHSVLTKAGKTPVVWEEMVLEHQPRLSNDTIVLV
WISSSHAKKVAKKGHRLIHAASNYFYLDCGGGGWMGNHINGNSWCDPFKTWQKAYSFNPTEGLQSYQRNLVLGGQ
QLLWAEQAGPSNLDSIVWPRAAASAEVFWSGPGGDVNNALPRLHDIAYRFIQRGVQAIPLQPHWCALRPGACNMD
PRLKFLMRIRDLVRTNTGIDLAFDLPWELVGIPKLENLVHLVCLFCIPLFAMGIVTLYSRWNAPPEVFRCLCYEF
STGLSSFAGCSTD*
Coding >Agabi119p4|695400
ATGACATCTGGAACCAAGCCGCTTCGTCTTTCGCCCAAATTTACAATCAAATTTTCCCAGAAAGTAACAAAAGAT
ATCTCCGACGCCGCCCAGCGTACCACTAAGTTCCTCAAAACGGACCGGCTTCGGGCTCTCGTACCCGACCGTGGC
GCCTCATTATCTGGCGTACTACACTCGGCCAATGTTCTACATACCCTTACAGTTAACCTTACTCCATCGAATGGT
GTAATCACGAGTCTTTCCGAAGAAGTTATGAAAGGCATCGGGGCACAGGATGAGAGTTACTGGTTGGAAGTTCCA
GCTGACGGAAATACTGCGTTTCTGAGCGCGAACACAGCCTTGGGCGTGTTCCGCGGATTAACGACTTTCGAACAA
CTGTGGTACGATTTGGATGGGGTGGTTTATACGACTCAGGCCCCCGTTCAAATTGAAGATGCCCCTGCCTATCCG
TACCGCGGATTTATGTTGGATACTTCGCGCAACTTCTTCCCGGTCGAGGATATCAAGCGCACTTTGGACGCAATG
AGCTGGGTCAAGATAAACCACTTTCATTGGCATGTCGTTGATTCTCAGTCATTCCCCCTTGTTGTTCCGAGATTT
GAAGAGATATCGTCAAAAGGAGCGTATTCATCAGCAGAAGTATATATGCCTCAAGATGTTAAGGACATCGTTGAA
TATGCTGCTGCACGTGGGATTGACGTTATGGTCGAAATTGATATTCCTGGACATACGGCTGTCATTTCAAAATCA
TACCCCCTGCATGTAGCGTGTCCCGAAGCCACTCCATGGTCCCATTTTGCAAATGAACCACCTGCGGGCCAACTT
CGCATCACAAGTCCATCCACAGTTTCGTTTACCACTGACTTGATTCGAGCTGTTTCCTCAATGTTTCCATCAAAA
CTGTTTAGTACGGGTGGGGACGAAGTTAATATGAATTGCTACAAAAAGGATTGGTTAACTCAACGGGATCTTGGG
GCGCAAGGGAAGAATATCGAACAAGCTTTAGATTCTTTCACTCAAGCCACACACTCAGTCCTTACAAAAGCGGGA
AAGACGCCGGTAGTATGGGAAGAAATGGTACTCGAACATCAACCTAGACTTAGTAATGATACCATTGTATTGGTC
TGGATATCATCTAGCCATGCGAAAAAGGTCGCGAAAAAAGGTCACAGACTTATTCACGCTGCCTCCAATTATTTT
TATCTTGATTGCGGAGGTGGAGGTTGGATGGGAAATCATATAAACGGGAATAGTTGGTGTGATCCTTTCAAAACA
TGGCAAAAGGCGTATTCCTTTAATCCGACTGAAGGATTGCAGAGTTATCAAAGGAATCTAGTACTCGGTGGTCAA
CAATTGTTATGGGCTGAACAGGCTGGTCCTTCGAACCTTGACTCTATTGTTTGGCCGCGCGCCGCCGCTTCAGCA
GAAGTATTTTGGTCCGGTCCTGGAGGAGATGTGAATAACGCCTTGCCGAGGTTGCATGATATCGCGTATCGATTC
ATTCAAAGGGGCGTGCAAGCTATACCATTACAACCGCATTGGTGTGCTCTGCGTCCCGGGGCATGTAACATGGAC
CCGCGGCTAAAATTCTTGATGCGAATCAGGGATTTGGTGAGAACAAATACGGGGATTGATTTGGCCTTTGATTTA
CCCTGGGAGCTTGTGGGGATTCCCAAGCTGGAGAACTTAGTGCATTTGGTTTGTCTGTTCTGTATTCCACTTTTT
GCTATGGGTATTGTTACATTATATTCACGCTGGAATGCGCCTCCTGAAGTTTTTCGTTGTCTATGTTATGAGTTT
TCTACTGGACTGTCGTCGTTCGCGGGATGTAGCACAGACTAG
Transcript >Agabi119p4|695400
ATGACATCTGGAACCAAGCCGCTTCGTCTTTCGCCCAAATTTACAATCAAATTTTCCCAGAAAGTAACAAAAGAT
ATCTCCGACGCCGCCCAGCGTACCACTAAGTTCCTCAAAACGGACCGGCTTCGGGCTCTCGTACCCGACCGTGGC
GCCTCATTATCTGGCGTACTACACTCGGCCAATGTTCTACATACCCTTACAGTTAACCTTACTCCATCGAATGGT
GTAATCACGAGTCTTTCCGAAGAAGTTATGAAAGGCATCGGGGCACAGGATGAGAGTTACTGGTTGGAAGTTCCA
GCTGACGGAAATACTGCGTTTCTGAGCGCGAACACAGCCTTGGGCGTGTTCCGCGGATTAACGACTTTCGAACAA
CTGTGGTACGATTTGGATGGGGTGGTTTATACGACTCAGGCCCCCGTTCAAATTGAAGATGCCCCTGCCTATCCG
TACCGCGGATTTATGTTGGATACTTCGCGCAACTTCTTCCCGGTCGAGGATATCAAGCGCACTTTGGACGCAATG
AGCTGGGTCAAGATAAACCACTTTCATTGGCATGTCGTTGATTCTCAGTCATTCCCCCTTGTTGTTCCGAGATTT
GAAGAGATATCGTCAAAAGGAGCGTATTCATCAGCAGAAGTATATATGCCTCAAGATGTTAAGGACATCGTTGAA
TATGCTGCTGCACGTGGGATTGACGTTATGGTCGAAATTGATATTCCTGGACATACGGCTGTCATTTCAAAATCA
TACCCCCTGCATGTAGCGTGTCCCGAAGCCACTCCATGGTCCCATTTTGCAAATGAACCACCTGCGGGCCAACTT
CGCATCACAAGTCCATCCACAGTTTCGTTTACCACTGACTTGATTCGAGCTGTTTCCTCAATGTTTCCATCAAAA
CTGTTTAGTACGGGTGGGGACGAAGTTAATATGAATTGCTACAAAAAGGATTGGTTAACTCAACGGGATCTTGGG
GCGCAAGGGAAGAATATCGAACAAGCTTTAGATTCTTTCACTCAAGCCACACACTCAGTCCTTACAAAAGCGGGA
AAGACGCCGGTAGTATGGGAAGAAATGGTACTCGAACATCAACCTAGACTTAGTAATGATACCATTGTATTGGTC
TGGATATCATCTAGCCATGCGAAAAAGGTCGCGAAAAAAGGTCACAGACTTATTCACGCTGCCTCCAATTATTTT
TATCTTGATTGCGGAGGTGGAGGTTGGATGGGAAATCATATAAACGGGAATAGTTGGTGTGATCCTTTCAAAACA
TGGCAAAAGGCGTATTCCTTTAATCCGACTGAAGGATTGCAGAGTTATCAAAGGAATCTAGTACTCGGTGGTCAA
CAATTGTTATGGGCTGAACAGGCTGGTCCTTCGAACCTTGACTCTATTGTTTGGCCGCGCGCCGCCGCTTCAGCA
GAAGTATTTTGGTCCGGTCCTGGAGGAGATGTGAATAACGCCTTGCCGAGGTTGCATGATATCGCGTATCGATTC
ATTCAAAGGGGCGTGCAAGCTATACCATTACAACCGCATTGGTGTGCTCTGCGTCCCGGGGCATGTAACATGGAC
CCGCGGCTAAAATTCTTGATGCGAATCAGGGATTTGGTGAGAACAAATACGGGGATTGATTTGGCCTTTGATTTA
CCCTGGGAGCTTGTGGGGATTCCCAAGCTGGAGAACTTAGTGCATTTGGTTTGTCTGTTCTGTATTCCACTTTTT
GCTATGGGTATTGTTACATTATATTCACGCTGGAATGCGCCTCCTGAAGTTTTTCGTTGTCTATGTTATGAGTTT
TCTACTGGACTGTCGTCGTTCGCGGGATGTAGCACAGACTAG
Gene >Agabi119p4|695400
ATGACATCTGGAACCAAGCCGCTTCGTCTTTCGCCCAAATTTACAATCAAATTTTCCCAGAAAGTAACAAAAGAT
ATCTCCGACGCCGCCCAGCGTACCACTAAGTTCCTCAAAACGGACCGGCTTCGGGCTCTCGTACCCGACCGTGGC
GCCTCATTATCTGGCGTACTACACTCGGCCAATGTTCTACATACCCTTACAGTTAACCTTACTCCATCGAATGGT
GTAATCACGAGTCTTTCCGAAGAAGTTATGAAAGGCATCGGGGCACAGGATGAGAGTTACTGGTTGGAAGTTCCA
GCTGACGGAAATACTGCGTTTCTGAGCGCGAACACAGCCTTGGGCGTGTTCCGCGGATTAACGACTTTCGAACAA
CTGTGGTACGATTTGGATGGGGTGGTTTATACGACTCAGGCCCCCGTTCAAATTGAAGATGCCCCTGCCTATGTA
AGTCTTCTTCAGAGTAAAATTCATTTTTGACTATTGCTGAAATTGAGACAGCCGTACCGCGGATTTATGTTGGAT
ACTTCGCGCAACTTGTGAGTCCTTAAGGTGACGCACGTATTTAGTACTGATTTATAATTATCCAGCTTCCCGGTC
GAGGATATCAAGCGCACTTTGGACGCAATGAGCTGGGTCAAGATAAACCACTTTCATTGGCATGTCGTTGATTCT
CAGTCATTCCCCCTTGTTGTTCCGAGATTTGAAGAGATATCGTCAAAAGGAGCGTATTCATCAGCAGAAGTATAT
ATGCCTCAAGATGTTAAGGACATCGTTGAATATGCTGCTGCAGTATGTCTTTTTTCGATTATCTGACCTGTTTTG
ACTGCTTCCCCGACTATAGCGTGGGATTGACGTTATGGTCGAAATTGATATTCCTGGACATACGGCTGTCATTTC
AAAATCATACCCCCTGCATGTAGCGTGTCCCGAAGCCACTCCATGGTCCCATTTTGCAAATGGTAATGTTGATAT
CACTCATCAATTTACATGTTGATTCGTTTCCAAGTCTGATGCCGAGAGTCAGAACCACCTGCGGGCCAACTTCGC
ATCACAAGTCCATCCACAGTTTCGTTTACCACTGACTTGATTCGAGCTGTTTCCTCAATGTTTCCATCAAAACTG
TTTAGTACGGGTGGGGACGAAGTTAATATGAATTGCTACAAAAAGGATTGGTTAACTCAACGGGATCTTGGTGCG
TCATGGAAAATTCATGAAGCTCTGGTTCTAACTAGTGTGGTTCCCATAGGGGCGCAAGGGAAGAATATCGAACAA
GCTTTAGATTCTTTCACTCAAGCCACACACTCAGTCCTTACAAAAGCGGGAAAGACGCCGGTAGTATGGGAAGGT
GAGTTTCTTACTTCATCCGGGGGAAGGAATCCGAGCTGAGCATGAAAACTAGAAATGGTACTCGAACATCAACCT
AGACTTAGTAATGATACCATTGTATTGTACCAATCTCCCCCTCACCCTAACGTTTGATTTTTTCGCTGAAACTTG
CTTTTTAGGGTCTGGATATCATCTAGCCATGCGAAAAAGGTCGCGAAAAAAGGTCACAGACTTATTCACGCTGCC
TCCAATTATTTTTATCTTGATTGCGGAGGTGGAGGTTGGATGGGAAATCATATAAACGGGAATAGTTGGTGTGAT
CCTTTCAAAACATGGCAAAAGGCGTATTCCTTTAATCCGACTGAAGGATTGCAGAGTTATCAAAGGAATCTAGTA
CTCGGTGGTAAGCCCGTTTATGTCTTCTTTCTCTCGCAAGATTCGATTCTGATATTCCTGACTGATTCGTTCGGA
AGGTCAACAATTGTTATGGGCTGAACAGGCTGGTCCTTCGAACCTTGACTCTATTGTTTGGCCGCGCGCCGCCGC
TTCAGCAGAAGTATTTTGGTCCGGTCCTGGAGGAGATGTGAATAACGCCTTGCCGAGGTTGCATGATATCGCGTA
TCGATTCATTCAAAGGGGCGTGCAAGCTATACCATTACAACCGCATTGGTGTGCTCTGCGTCCCGGGGCATGTAA
CATGGACCCGTGCGTTAATCATTTTCTTTCTGAAGAAAAGATCTAGGATTGAAATTTCTTCTTTTGCTTCTGTCG
TGTGCTTAGGCGGCTAAAATTCTTGATGCGAATCAGGGATTTGGTGAGAACAAATACGGGGATTGATTTGGCCTT
TGATTTACCCTGGGAGCTTGTGGGGATTCCCAAGCTGGAGAACTTAGTGCATTTGGTTTGTCTGTTCTGTATTCC
ACTTTTTGCTATGGGTATTGTTACATTATATTCACGCTGGAATGCGCCTCCTGAAGTAGCTGCCGAAACCGATGA
TCTCGACTTATTTTTTTCGTGAAATTGACATATAGGTTTTTCGTTGTCTATGTTATGAGGTATGTGTTTACATTG
TCTCAAAACCTGAATAAGAGAAGATTTATCATTTTCATTTTTCTAACAAGTTTTCTACTGGACTGTCGTCGTTCG
CGGGATGTAGCACAGACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail