Fungal Genomics

General Properties

Protein ID	Agabi119p4|686450
Gene name
Location	scaffold_07:2047174..2048725
Strand	+
Gene length (bp)	1551
Transcript length (bp)	1551
Coding sequence length (bp)	1551
Protein length (aa)	517

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13976	gag_pre-integrs	GAG-pre-integrase domain	1.4E-11	433	503
PF14223	Retrotran_gag_2	gag-polypeptide of LTR copia-type	1.4E-11	11	136

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp|P04146|COPIA_DROME	Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3	322	508	2.0E-12

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	61
Change Orthofinder run	5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|550200
Agaricus bisporus var bisporus H39	AgabiH39|299900
Agaricus bisporus var bisporus H97	AgabiH97|079920
Agaricus bisporus var bisporus H97	AgabiH97|032400
Agaricus bisporus var bisporus H97	AgabiH97|027490
Agaricus bisporus var bisporus H97	AgabiH97|025990
Agaricus bisporus var bisporus H97	AgabiH97|039170
Agaricus bisporus var burnettii H119p4	Agabi119p4|698050
Agaricus bisporus var burnettii H119p4	Agabi119p4|556250
Agaricus bisporus var burnettii H119p4	Agabi119p4|669400
Agaricus bisporus var burnettii H119p4	Agabi119p4|656400
Agaricus bisporus var burnettii H119p4	Agabi119p4|639550
Agaricus bisporus var burnettii H119p4	Agabi119p4|599750
Agaricus bisporus var burnettii H119p4	Agabi119p4|595950
Agaricus bisporus var burnettii H119p4	Agabi119p4|577300
Agaricus bisporus var burnettii H119p4	Agabi119p4|686450 (this protein)
Agaricus bisporus var burnettii H119p4	Agabi119p4|686500

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|686450 MGIHPPRTAEWKVRNAWTMGLLIYNTTDPIGLGISIGGTAADAWRSYLDTYEVASEIATLNAEMELRNMVYTDGQ DFTEFISRLGTKWSNANALGAKIDDKAFRTIILNSLPRSWDSIVATLYTTKTSWEAISQLLTHWARVSRDRVTTS QTTSALQTTTTQSNNRNRQRSQNSQLTCTNPNCGRRGHTIELCYWPGGGKAGQFPPGFGRRGGAGGSASNTATGG YQPSANNTTTNTTEKAESNEPKVFALAAITDIINDTPKVSSTLPILSNNPDGSLISTPSVSERPYAEICVTGKDQ GVSVSTTLNTTTSTLPYDVITLLDSGASDHCFVNKSLFATYIPMIPPRQGNSAGKGSTFLIEGAGEVGFFTPLDG APTKIILFDALHTPQLRSNLISVSKLVSRGSPVSFEGNTAVVRTRSGAVALIAMKENGLYVVPPVDVHANAVQSK RKAVSLGTWHRRLSHASMEVIKKMLRENLVDGLSVTGPMELEGLCEDCIFGKHTSHPYNNPTSQEK*
Coding	>Agabi119p4|686450 ATGGGAATCCACCCCCCACGCACTGCCGAATGGAAAGTCCGCAATGCCTGGACTATGGGTCTCCTCATTTACAAC ACAACTGACCCTATCGGCCTTGGAATCTCTATCGGAGGAACAGCAGCCGATGCTTGGAGGTCGTACCTCGACACC TATGAGGTCGCATCCGAGATTGCTACCCTTAACGCCGAAATGGAGTTGAGAAATATGGTATACACAGACGGGCAG GATTTCACTGAATTCATATCACGCCTCGGAACTAAATGGTCAAATGCAAATGCTCTTGGGGCGAAAATTGACGAT AAGGCATTCCGAACAATTATCTTGAACTCCTTGCCCCGCTCCTGGGACTCCATTGTCGCTACTTTGTACACCACC AAAACGTCGTGGGAGGCTATAAGCCAACTTCTAACCCATTGGGCTAGAGTCAGCCGTGATCGAGTCACTACGTCG CAGACTACTTCAGCTCTCCAAACCACTACCACACAGTCTAACAATCGCAACCGCCAACGAAGCCAAAACAGTCAA TTAACTTGCACCAATCCCAATTGTGGCCGTAGGGGACATACCATCGAGCTTTGTTACTGGCCAGGTGGCGGAAAG GCCGGGCAGTTTCCGCCTGGTTTTGGACGACGTGGGGGAGCAGGAGGTAGTGCCAGCAATACTGCTACCGGAGGA TATCAGCCTTCTGCAAACAACACCACTACCAACACCACAGAGAAGGCAGAAAGCAACGAACCGAAGGTCTTCGCT CTCGCTGCGATCACGGACATAATCAACGATACGCCAAAGGTATCATCCACCCTCCCAATACTTTCCAACAATCCT GACGGCTCTTTGATTTCAACCCCTAGTGTCTCTGAGAGACCATATGCTGAGATCTGCGTAACGGGGAAGGATCAG GGAGTTAGTGTTAGTACCACATTGAATACAACTACTTCCACTCTACCTTACGACGTGATTACTCTGCTCGATTCC GGGGCGAGCGACCATTGCTTCGTTAATAAATCACTCTTCGCTACATACATTCCGATGATCCCACCTCGACAAGGA AACTCCGCAGGCAAAGGTTCTACTTTTCTGATAGAGGGTGCGGGTGAAGTTGGCTTCTTCACTCCTCTTGACGGG GCGCCAACAAAGATAATTTTGTTTGATGCACTTCATACCCCGCAACTGAGGTCAAACCTGATCTCGGTCTCCAAG CTTGTATCACGGGGATCACCCGTTAGTTTTGAGGGGAATACAGCAGTTGTTCGTACCCGTAGCGGCGCAGTTGCA TTGATAGCCATGAAGGAGAATGGTCTATATGTTGTACCGCCGGTTGACGTCCATGCGAATGCCGTGCAATCGAAA AGGAAAGCTGTATCTTTGGGAACTTGGCACCGTCGTCTCAGCCACGCCAGCATGGAAGTCATCAAAAAGATGTTA CGCGAAAACCTCGTAGATGGCTTGAGTGTTACAGGACCTATGGAGTTGGAAGGGCTCTGTGAAGACTGTATCTTC GGCAAACATACCTCACATCCATACAATAATCCCACATCGCAGGAGAAATAG
Transcript	>Agabi119p4|686450 ATGGGAATCCACCCCCCACGCACTGCCGAATGGAAAGTCCGCAATGCCTGGACTATGGGTCTCCTCATTTACAAC ACAACTGACCCTATCGGCCTTGGAATCTCTATCGGAGGAACAGCAGCCGATGCTTGGAGGTCGTACCTCGACACC TATGAGGTCGCATCCGAGATTGCTACCCTTAACGCCGAAATGGAGTTGAGAAATATGGTATACACAGACGGGCAG GATTTCACTGAATTCATATCACGCCTCGGAACTAAATGGTCAAATGCAAATGCTCTTGGGGCGAAAATTGACGAT AAGGCATTCCGAACAATTATCTTGAACTCCTTGCCCCGCTCCTGGGACTCCATTGTCGCTACTTTGTACACCACC AAAACGTCGTGGGAGGCTATAAGCCAACTTCTAACCCATTGGGCTAGAGTCAGCCGTGATCGAGTCACTACGTCG CAGACTACTTCAGCTCTCCAAACCACTACCACACAGTCTAACAATCGCAACCGCCAACGAAGCCAAAACAGTCAA TTAACTTGCACCAATCCCAATTGTGGCCGTAGGGGACATACCATCGAGCTTTGTTACTGGCCAGGTGGCGGAAAG GCCGGGCAGTTTCCGCCTGGTTTTGGACGACGTGGGGGAGCAGGAGGTAGTGCCAGCAATACTGCTACCGGAGGA TATCAGCCTTCTGCAAACAACACCACTACCAACACCACAGAGAAGGCAGAAAGCAACGAACCGAAGGTCTTCGCT CTCGCTGCGATCACGGACATAATCAACGATACGCCAAAGGTATCATCCACCCTCCCAATACTTTCCAACAATCCT GACGGCTCTTTGATTTCAACCCCTAGTGTCTCTGAGAGACCATATGCTGAGATCTGCGTAACGGGGAAGGATCAG GGAGTTAGTGTTAGTACCACATTGAATACAACTACTTCCACTCTACCTTACGACGTGATTACTCTGCTCGATTCC GGGGCGAGCGACCATTGCTTCGTTAATAAATCACTCTTCGCTACATACATTCCGATGATCCCACCTCGACAAGGA AACTCCGCAGGCAAAGGTTCTACTTTTCTGATAGAGGGTGCGGGTGAAGTTGGCTTCTTCACTCCTCTTGACGGG GCGCCAACAAAGATAATTTTGTTTGATGCACTTCATACCCCGCAACTGAGGTCAAACCTGATCTCGGTCTCCAAG CTTGTATCACGGGGATCACCCGTTAGTTTTGAGGGGAATACAGCAGTTGTTCGTACCCGTAGCGGCGCAGTTGCA TTGATAGCCATGAAGGAGAATGGTCTATATGTTGTACCGCCGGTTGACGTCCATGCGAATGCCGTGCAATCGAAA AGGAAAGCTGTATCTTTGGGAACTTGGCACCGTCGTCTCAGCCACGCCAGCATGGAAGTCATCAAAAAGATGTTA CGCGAAAACCTCGTAGATGGCTTGAGTGTTACAGGACCTATGGAGTTGGAAGGGCTCTGTGAAGACTGTATCTTC GGCAAACATACCTCACATCCATACAATAATCCCACATCGCAGGAGAAATAG
Gene	>Agabi119p4|686450 ATGGGAATCCACCCCCCACGCACTGCCGAATGGAAAGTCCGCAATGCCTGGACTATGGGTCTCCTCATTTACAAC ACAACTGACCCTATCGGCCTTGGAATCTCTATCGGAGGAACAGCAGCCGATGCTTGGAGGTCGTACCTCGACACC TATGAGGTCGCATCCGAGATTGCTACCCTTAACGCCGAAATGGAGTTGAGAAATATGGTATACACAGACGGGCAG GATTTCACTGAATTCATATCACGCCTCGGAACTAAATGGTCAAATGCAAATGCTCTTGGGGCGAAAATTGACGAT AAGGCATTCCGAACAATTATCTTGAACTCCTTGCCCCGCTCCTGGGACTCCATTGTCGCTACTTTGTACACCACC AAAACGTCGTGGGAGGCTATAAGCCAACTTCTAACCCATTGGGCTAGAGTCAGCCGTGATCGAGTCACTACGTCG CAGACTACTTCAGCTCTCCAAACCACTACCACACAGTCTAACAATCGCAACCGCCAACGAAGCCAAAACAGTCAA TTAACTTGCACCAATCCCAATTGTGGCCGTAGGGGACATACCATCGAGCTTTGTTACTGGCCAGGTGGCGGAAAG GCCGGGCAGTTTCCGCCTGGTTTTGGACGACGTGGGGGAGCAGGAGGTAGTGCCAGCAATACTGCTACCGGAGGA TATCAGCCTTCTGCAAACAACACCACTACCAACACCACAGAGAAGGCAGAAAGCAACGAACCGAAGGTCTTCGCT CTCGCTGCGATCACGGACATAATCAACGATACGCCAAAGGTATCATCCACCCTCCCAATACTTTCCAACAATCCT GACGGCTCTTTGATTTCAACCCCTAGTGTCTCTGAGAGACCATATGCTGAGATCTGCGTAACGGGGAAGGATCAG GGAGTTAGTGTTAGTACCACATTGAATACAACTACTTCCACTCTACCTTACGACGTGATTACTCTGCTCGATTCC GGGGCGAGCGACCATTGCTTCGTTAATAAATCACTCTTCGCTACATACATTCCGATGATCCCACCTCGACAAGGA AACTCCGCAGGCAAAGGTTCTACTTTTCTGATAGAGGGTGCGGGTGAAGTTGGCTTCTTCACTCCTCTTGACGGG GCGCCAACAAAGATAATTTTGTTTGATGCACTTCATACCCCGCAACTGAGGTCAAACCTGATCTCGGTCTCCAAG CTTGTATCACGGGGATCACCCGTTAGTTTTGAGGGGAATACAGCAGTTGTTCGTACCCGTAGCGGCGCAGTTGCA TTGATAGCCATGAAGGAGAATGGTCTATATGTTGTACCGCCGGTTGACGTCCATGCGAATGCCGTGCAATCGAAA AGGAAAGCTGTATCTTTGGGAACTTGGCACCGTCGTCTCAGCCACGCCAGCATGGAAGTCATCAAAAAGATGTTA CGCGAAAACCTCGTAGATGGCTTGAGTGTTACAGGACCTATGGAGTTGGAAGGGCTCTGTGAAGACTGTATCTTC GGCAAACATACCTCACATCCATACAATAATCCCACATCGCAGGAGAAATAG