Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|674900
Gene name
Locationscaffold_07:211858..212830
Strand+
Gene length (bp)972
Transcript length (bp)654
Coding sequence length (bp)654
Protein length (aa) 218

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01161 PBP Phosphatidylethanolamine-binding protein 1.4E-08 87 167

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q5UR88|PEBPH_MIMIV Phosphatidylethanolamine-binding protein homolog R644 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R644 PE=1 SV=1 58 179 5.0E-09
sp|P54186|D1_ONCVO Protein D1 (Fragment) OS=Onchocerca volvulus GN=D1 PE=2 SV=1 46 160 8.0E-09
sp|P31729|OV16_ONCVO OV-16 antigen OS=Onchocerca volvulus GN=OV16 PE=2 SV=2 26 160 4.0E-08
sp|Q06252|YL179_YEAST Uncharacterized protein YLR179C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YLR179C PE=1 SV=1 42 167 2.0E-07
sp|P14306|CPYI_YEAST Carboxypeptidase Y inhibitor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TFS1 PE=1 SV=2 92 164 1.0E-06
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q5UR88|PEBPH_MIMIV Phosphatidylethanolamine-binding protein homolog R644 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R644 PE=1 SV=1 58 179 5.0E-09
sp|P54186|D1_ONCVO Protein D1 (Fragment) OS=Onchocerca volvulus GN=D1 PE=2 SV=1 46 160 8.0E-09
sp|P31729|OV16_ONCVO OV-16 antigen OS=Onchocerca volvulus GN=OV16 PE=2 SV=2 26 160 4.0E-08
sp|Q06252|YL179_YEAST Uncharacterized protein YLR179C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YLR179C PE=1 SV=1 42 167 2.0E-07
sp|P14306|CPYI_YEAST Carboxypeptidase Y inhibitor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TFS1 PE=1 SV=2 92 164 1.0E-06
sp|P54187|D2_ONCVO Protein D2 (Fragment) OS=Onchocerca volvulus GN=D2 PE=2 SV=1 92 160 4.0E-06
sp|Q8VIN1|PEBP2_MOUSE Phosphatidylethanolamine-binding protein 2 OS=Mus musculus GN=Pbp2 PE=1 SV=1 36 161 8.0E-06
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GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

SignalP signal predicted Location Score
Yes 1 - 19 0.999752

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID5
Orthogroup8502
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|098060
Agaricus bisporus var bisporus H97 AgabiH97|098060
Agaricus bisporus var burnettii H119p4 Agabi119p4|674900 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|674900
MRLSLSFSFLSLFVLAIKAQDRDLGVVKRAFEAADIPADLSLNFNPTALLEVTFPESDGNDITIHAGQQVPRDST
AGPPIYHAVGLRSSGPFVITMVDPDAPTPQMPTVAQERHFLGGDFHLDRTGRLINSTAGIDEFLQPSPPAGSDAH
RYIFMLWNQPRGFDQQTVVGADTPRGSFNFLAGYAAKEISEPRRASEELSVISLIAESVGKKVSFGN*
Coding >Agabi119p4|674900
ATGCGTCTTTCTCTCTCCTTCAGTTTCTTGTCTTTGTTCGTCCTTGCTATTAAAGCACAAGACAGAGACCTCGGG
GTCGTGAAGCGAGCGTTTGAGGCTGCCGATATTCCTGCTGACCTCTCACTCAACTTTAACCCAACTGCTCTTCTT
GAAGTGACTTTTCCTGAAAGCGATGGAAACGACATCACAATTCATGCCGGTCAACAAGTTCCCCGCGACTCTACC
GCCGGTCCTCCTATTTACCACGCCGTCGGTCTACGGAGCAGCGGTCCCTTCGTTATCACTATGGTTGACCCAGAT
GCCCCGACACCTCAAATGCCGACTGTCGCCCAGGAACGTCATTTCTTGGGCGGAGATTTCCATTTAGATCGTACC
GGTCGACTCATTAATTCGACTGCGGGCATCGACGAATTTTTACAGCCTTCACCCCCTGCTGGATCCGATGCTCAT
AGGTATATCTTTATGTTATGGAACCAACCACGTGGGTTCGACCAACAGACGGTTGTTGGAGCCGATACTCCGAGA
GGTTCGTTTAATTTTCTCGCTGGCTATGCTGCCAAGGAAATTTCTGAACCTCGACGAGCTTCAGAAGAGCTTTCT
GTTATCAGCTTAATTGCTGAGTCAGTAGGTAAGAAGGTCTCCTTCGGGAACTAG
Transcript >Agabi119p4|674900
ATGCGTCTTTCTCTCTCCTTCAGTTTCTTGTCTTTGTTCGTCCTTGCTATTAAAGCACAAGACAGAGACCTCGGG
GTCGTGAAGCGAGCGTTTGAGGCTGCCGATATTCCTGCTGACCTCTCACTCAACTTTAACCCAACTGCTCTTCTT
GAAGTGACTTTTCCTGAAAGCGATGGAAACGACATCACAATTCATGCCGGTCAACAAGTTCCCCGCGACTCTACC
GCCGGTCCTCCTATTTACCACGCCGTCGGTCTACGGAGCAGCGGTCCCTTCGTTATCACTATGGTTGACCCAGAT
GCCCCGACACCTCAAATGCCGACTGTCGCCCAGGAACGTCATTTCTTGGGCGGAGATTTCCATTTAGATCGTACC
GGTCGACTCATTAATTCGACTGCGGGCATCGACGAATTTTTACAGCCTTCACCCCCTGCTGGATCCGATGCTCAT
AGGTATATCTTTATGTTATGGAACCAACCACGTGGGTTCGACCAACAGACGGTTGTTGGAGCCGATACTCCGAGA
GGTTCGTTTAATTTTCTCGCTGGCTATGCTGCCAAGGAAATTTCTGAACCTCGACGAGCTTCAGAAGAGCTTTCT
GTTATCAGCTTAATTGCTGAGTCAGTAGGTAAGAAGGTCTCCTTCGGGAACTAG
Gene >Agabi119p4|674900
ATGCGTCTTTCTCTCTCCTTCAGTTTCTTGTCTTTGTTCGTCCTTGCTATTAAAGCACAAGACAGAGACCTCGGG
GTCGTGAAGCGAGCGTTTGAGGCTGCCGATGTAAGCGCTTCCATGGGTTGCAGACTCACAATTGACGTCGAGTAT
TTTCGGTCGTAGATTCCTGCTGACCTCTCACTCAACTTTAACCCAACTGCTCTTCTTGAAGTGACTTTTCCTGAA
AGCGATGGAAACGACATCACAATTCATGCCGGTCAACAAGTTCCCCGCGACTGTTAGCACTTACTAAATACGTTT
TGTGTCAGTATCATTTAACTCACGAGTTCCTGTTGTTACTTAGCTACCGCCGGTCCTCCTATTTACCACGCCGTC
GGTCTACGGAGCAGCGGTCCCTTCGTTATCACTATGGTTGACCCAGATGCCCCGACACCTCAAATGCCGACTGTC
GCCCAGGAACGTCATTTCTTGGGCGGAGATTTCCATTTAGATCGTACCGGTCGACTCATTAATTCGACTGCGGGC
ATCGACGAATTTTTACAGCCTTCACCCCCTGCTGGATCCGATGCTCATAGGTTCGTTTTTTCGTGTTCAAACATT
TCAGGCTTCGATTATGATTTGACTGCGAAATTTTGAACAGGTATATCTTTATGTTATGGAACCAACCACGTGGGT
TCGACCAACAGACGGTTGTTGGAGCCGATACTCCGAGAGGTTCGTTTAATGTAAGTGAGTTTGCTCGGGCAGTTG
GCTTGGGAGAGCCTATTGCGGGTACATTTTTGTTTGTCGCACCTAATGCATAAGCATTGGAGATCATTTAGTCTG
TATGATGGCATTGAATAGCTATGCAAATAGTTTCTCGCTGGCTATGCTGCCAAGGAAATTTCTGAACCTCGACGA
GCTTCAGAAGAGCTTTCTGTTATCAGCTTAATTGCTGAGTCAGTAGGTAAGAAGGTCTCCTTCGGGAACTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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