Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|674900
Gene name
Locationscaffold_07:211858..212830
Strand+
Gene length (bp)972
Transcript length (bp)654
Coding sequence length (bp)654
Protein length (aa) 218

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01161 PBP Phosphatidylethanolamine-binding protein 1.4E-08 87 167

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q5UR88|PEBPH_MIMIV Phosphatidylethanolamine-binding protein homolog R644 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R644 PE=1 SV=1 58 179 5.0E-09
sp|P54186|D1_ONCVO Protein D1 (Fragment) OS=Onchocerca volvulus GN=D1 PE=2 SV=1 46 160 8.0E-09
sp|P31729|OV16_ONCVO OV-16 antigen OS=Onchocerca volvulus GN=OV16 PE=2 SV=2 26 160 4.0E-08
sp|Q06252|YL179_YEAST Uncharacterized protein YLR179C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YLR179C PE=1 SV=1 42 167 2.0E-07
sp|P14306|CPYI_YEAST Carboxypeptidase Y inhibitor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TFS1 PE=1 SV=2 92 164 1.0E-06
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q5UR88|PEBPH_MIMIV Phosphatidylethanolamine-binding protein homolog R644 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R644 PE=1 SV=1 58 179 5.0E-09
sp|P54186|D1_ONCVO Protein D1 (Fragment) OS=Onchocerca volvulus GN=D1 PE=2 SV=1 46 160 8.0E-09
sp|P31729|OV16_ONCVO OV-16 antigen OS=Onchocerca volvulus GN=OV16 PE=2 SV=2 26 160 4.0E-08
sp|Q06252|YL179_YEAST Uncharacterized protein YLR179C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YLR179C PE=1 SV=1 42 167 2.0E-07
sp|P14306|CPYI_YEAST Carboxypeptidase Y inhibitor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TFS1 PE=1 SV=2 92 164 1.0E-06
sp|P54187|D2_ONCVO Protein D2 (Fragment) OS=Onchocerca volvulus GN=D2 PE=2 SV=1 92 160 4.0E-06
sp|Q8VIN1|PEBP2_MOUSE Phosphatidylethanolamine-binding protein 2 OS=Mus musculus GN=Pbp2 PE=1 SV=1 36 161 8.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|674900
MRLSLSFSFLSLFVLAIKAQDRDLGVVKRAFEAADIPADLSLNFNPTALLEVTFPESDGNDITIHAGQQVPRDST
AGPPIYHAVGLRSSGPFVITMVDPDAPTPQMPTVAQERHFLGGDFHLDRTGRLINSTAGIDEFLQPSPPAGSDAH
RYIFMLWNQPRGFDQQTVVGADTPRGSFNFLAGYAAKEISEPRRASEELSVISLIAESVGKKVSFGN*
Coding >Agabi119p4|674900
ATGCGTCTTTCTCTCTCCTTCAGTTTCTTGTCTTTGTTCGTCCTTGCTATTAAAGCACAAGACAGAGACCTCGGG
GTCGTGAAGCGAGCGTTTGAGGCTGCCGATATTCCTGCTGACCTCTCACTCAACTTTAACCCAACTGCTCTTCTT
GAAGTGACTTTTCCTGAAAGCGATGGAAACGACATCACAATTCATGCCGGTCAACAAGTTCCCCGCGACTCTACC
GCCGGTCCTCCTATTTACCACGCCGTCGGTCTACGGAGCAGCGGTCCCTTCGTTATCACTATGGTTGACCCAGAT
GCCCCGACACCTCAAATGCCGACTGTCGCCCAGGAACGTCATTTCTTGGGCGGAGATTTCCATTTAGATCGTACC
GGTCGACTCATTAATTCGACTGCGGGCATCGACGAATTTTTACAGCCTTCACCCCCTGCTGGATCCGATGCTCAT
AGGTATATCTTTATGTTATGGAACCAACCACGTGGGTTCGACCAACAGACGGTTGTTGGAGCCGATACTCCGAGA
GGTTCGTTTAATTTTCTCGCTGGCTATGCTGCCAAGGAAATTTCTGAACCTCGACGAGCTTCAGAAGAGCTTTCT
GTTATCAGCTTAATTGCTGAGTCAGTAGGTAAGAAGGTCTCCTTCGGGAACTAG
Transcript >Agabi119p4|674900
ATGCGTCTTTCTCTCTCCTTCAGTTTCTTGTCTTTGTTCGTCCTTGCTATTAAAGCACAAGACAGAGACCTCGGG
GTCGTGAAGCGAGCGTTTGAGGCTGCCGATATTCCTGCTGACCTCTCACTCAACTTTAACCCAACTGCTCTTCTT
GAAGTGACTTTTCCTGAAAGCGATGGAAACGACATCACAATTCATGCCGGTCAACAAGTTCCCCGCGACTCTACC
GCCGGTCCTCCTATTTACCACGCCGTCGGTCTACGGAGCAGCGGTCCCTTCGTTATCACTATGGTTGACCCAGAT
GCCCCGACACCTCAAATGCCGACTGTCGCCCAGGAACGTCATTTCTTGGGCGGAGATTTCCATTTAGATCGTACC
GGTCGACTCATTAATTCGACTGCGGGCATCGACGAATTTTTACAGCCTTCACCCCCTGCTGGATCCGATGCTCAT
AGGTATATCTTTATGTTATGGAACCAACCACGTGGGTTCGACCAACAGACGGTTGTTGGAGCCGATACTCCGAGA
GGTTCGTTTAATTTTCTCGCTGGCTATGCTGCCAAGGAAATTTCTGAACCTCGACGAGCTTCAGAAGAGCTTTCT
GTTATCAGCTTAATTGCTGAGTCAGTAGGTAAGAAGGTCTCCTTCGGGAACTAG
Gene >Agabi119p4|674900
ATGCGTCTTTCTCTCTCCTTCAGTTTCTTGTCTTTGTTCGTCCTTGCTATTAAAGCACAAGACAGAGACCTCGGG
GTCGTGAAGCGAGCGTTTGAGGCTGCCGATGTAAGCGCTTCCATGGGTTGCAGACTCACAATTGACGTCGAGTAT
TTTCGGTCGTAGATTCCTGCTGACCTCTCACTCAACTTTAACCCAACTGCTCTTCTTGAAGTGACTTTTCCTGAA
AGCGATGGAAACGACATCACAATTCATGCCGGTCAACAAGTTCCCCGCGACTGTTAGCACTTACTAAATACGTTT
TGTGTCAGTATCATTTAACTCACGAGTTCCTGTTGTTACTTAGCTACCGCCGGTCCTCCTATTTACCACGCCGTC
GGTCTACGGAGCAGCGGTCCCTTCGTTATCACTATGGTTGACCCAGATGCCCCGACACCTCAAATGCCGACTGTC
GCCCAGGAACGTCATTTCTTGGGCGGAGATTTCCATTTAGATCGTACCGGTCGACTCATTAATTCGACTGCGGGC
ATCGACGAATTTTTACAGCCTTCACCCCCTGCTGGATCCGATGCTCATAGGTTCGTTTTTTCGTGTTCAAACATT
TCAGGCTTCGATTATGATTTGACTGCGAAATTTTGAACAGGTATATCTTTATGTTATGGAACCAACCACGTGGGT
TCGACCAACAGACGGTTGTTGGAGCCGATACTCCGAGAGGTTCGTTTAATGTAAGTGAGTTTGCTCGGGCAGTTG
GCTTGGGAGAGCCTATTGCGGGTACATTTTTGTTTGTCGCACCTAATGCATAAGCATTGGAGATCATTTAGTCTG
TATGATGGCATTGAATAGCTATGCAAATAGTTTCTCGCTGGCTATGCTGCCAAGGAAATTTCTGAACCTCGACGA
GCTTCAGAAGAGCTTTCTGTTATCAGCTTAATTGCTGAGTCAGTAGGTAAGAAGGTCTCCTTCGGGAACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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