Fungal Genomics

General Properties

Protein ID	Agabi119p4|669350
Gene name
Location	scaffold_06:1993058..1994372
Strand	+
Gene length (bp)	1314
Transcript length (bp)	1314
Coding sequence length (bp)	1314
Protein length (aa)	438

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12937	F-box-like	F-box-like	1.3E-06	35	94

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0003674	molecular_function	No
GO:0005488	binding	No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	672
Change Orthofinder run	5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|385700
Agaricus bisporus var bisporus H97	AgabiH97|095790
Agaricus bisporus var burnettii H119p4	Agabi119p4|095790
Agaricus bisporus var burnettii H119p4	Agabi119p4|669350 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|669350 MVQITPLNVPSPSPSQTDLVHSQTLYVLSSSQTKIRSLPFELLSTIFQHACPTLDISAENPIPMPPFHLVLRLVS TSWYDIVQSTPQFWATVLLPELCAENVDIKARYLKLYLDTSGGLPLTLSFRFDKSLREVGWFVSSIVDATLEHSA HRIKALRLSRPPRIWLEKLIPQMCQLATMHIDNPRPEKNWSPRRDERLFLPKSVNFRQIYLRCPCLLDFHLACPT PSLTHVDLVDCPIDFAMEFLLRCPNLIDFRCRCLLLYPLKVENPRTMFTSPLIRSRLSTLSWSTNYTRDGISEWD SVLFELIRFPSLERFHWWAGSCRVIVDDTILAFLSRIPKSISTLELAEVDMTFTDAILNHFLLLTGVTQLRLCRC SCFFCGASILCLLTRDRWKEHLISQTHVYYNRLPGDRGMDTALDGISPRKWEETSGDVANQD*
Coding	>Agabi119p4|669350 ATGGTTCAAATCACTCCGTTGAATGTACCCTCTCCCTCACCTTCCCAGACTGATTTGGTTCACTCTCAGACGCTC TATGTTCTCAGCTCCAGTCAAACCAAGATTCGGTCTTTGCCCTTTGAGCTGTTATCCACTATTTTTCAGCACGCC TGCCCAACTCTCGATATATCTGCTGAAAATCCCATCCCGATGCCCCCCTTCCATCTTGTCCTACGATTGGTGTCG ACATCGTGGTACGACATAGTACAATCGACGCCGCAGTTTTGGGCCACAGTCCTTTTGCCGGAACTATGTGCCGAA AATGTTGATATCAAAGCGCGATATCTGAAGCTTTATCTAGACACTTCGGGCGGGTTGCCTCTCACCTTATCTTTC CGATTTGACAAGAGCTTAAGGGAGGTCGGCTGGTTCGTTTCCTCCATAGTCGACGCCACTTTGGAGCATAGTGCG CATCGGATCAAGGCTCTCCGATTATCACGACCTCCTCGTATCTGGCTGGAAAAATTGATTCCCCAAATGTGCCAG CTTGCTACGATGCACATTGACAATCCTCGACCTGAAAAAAACTGGTCACCCCGACGCGATGAGCGCCTTTTTCTT CCGAAGTCAGTCAATTTTCGGCAAATTTATCTTCGATGTCCTTGCCTCCTTGATTTCCATCTTGCATGCCCAACT CCATCACTTACACACGTCGATTTGGTTGACTGTCCCATCGATTTTGCCATGGAATTTCTTCTTAGATGCCCCAAC TTGATTGACTTCCGCTGTCGGTGTCTCTTACTTTATCCCTTAAAAGTCGAAAATCCCCGTACCATGTTTACGTCT CCCCTCATACGCAGCCGTCTTTCCACGCTTTCCTGGTCCACCAACTACACCCGTGATGGCATTTCTGAATGGGAT AGTGTGTTATTTGAGCTCATTCGTTTTCCGAGCCTGGAAAGGTTCCATTGGTGGGCCGGCTCTTGTCGAGTCATA GTGGATGACACTATACTTGCGTTCCTATCAAGAATTCCGAAATCGATCTCGACTCTCGAACTTGCTGAGGTTGAT ATGACTTTCACAGATGCGATCTTGAATCATTTTCTTCTGCTTACTGGTGTCACTCAACTTCGGCTTTGTCGTTGT AGTTGTTTCTTTTGTGGAGCAAGTATTCTCTGTCTGCTCACGAGGGACAGATGGAAGGAACATCTTATTTCCCAA ACTCACGTCTATTATAATCGATTACCGGGTGACAGGGGAATGGACACCGCCCTGGATGGTATTTCGCCCAGAAAG TGGGAAGAAACTAGCGGAGATGTTGCGAACCAGGATTAG
Transcript	>Agabi119p4|669350 ATGGTTCAAATCACTCCGTTGAATGTACCCTCTCCCTCACCTTCCCAGACTGATTTGGTTCACTCTCAGACGCTC TATGTTCTCAGCTCCAGTCAAACCAAGATTCGGTCTTTGCCCTTTGAGCTGTTATCCACTATTTTTCAGCACGCC TGCCCAACTCTCGATATATCTGCTGAAAATCCCATCCCGATGCCCCCCTTCCATCTTGTCCTACGATTGGTGTCG ACATCGTGGTACGACATAGTACAATCGACGCCGCAGTTTTGGGCCACAGTCCTTTTGCCGGAACTATGTGCCGAA AATGTTGATATCAAAGCGCGATATCTGAAGCTTTATCTAGACACTTCGGGCGGGTTGCCTCTCACCTTATCTTTC CGATTTGACAAGAGCTTAAGGGAGGTCGGCTGGTTCGTTTCCTCCATAGTCGACGCCACTTTGGAGCATAGTGCG CATCGGATCAAGGCTCTCCGATTATCACGACCTCCTCGTATCTGGCTGGAAAAATTGATTCCCCAAATGTGCCAG CTTGCTACGATGCACATTGACAATCCTCGACCTGAAAAAAACTGGTCACCCCGACGCGATGAGCGCCTTTTTCTT CCGAAGTCAGTCAATTTTCGGCAAATTTATCTTCGATGTCCTTGCCTCCTTGATTTCCATCTTGCATGCCCAACT CCATCACTTACACACGTCGATTTGGTTGACTGTCCCATCGATTTTGCCATGGAATTTCTTCTTAGATGCCCCAAC TTGATTGACTTCCGCTGTCGGTGTCTCTTACTTTATCCCTTAAAAGTCGAAAATCCCCGTACCATGTTTACGTCT CCCCTCATACGCAGCCGTCTTTCCACGCTTTCCTGGTCCACCAACTACACCCGTGATGGCATTTCTGAATGGGAT AGTGTGTTATTTGAGCTCATTCGTTTTCCGAGCCTGGAAAGGTTCCATTGGTGGGCCGGCTCTTGTCGAGTCATA GTGGATGACACTATACTTGCGTTCCTATCAAGAATTCCGAAATCGATCTCGACTCTCGAACTTGCTGAGGTTGAT ATGACTTTCACAGATGCGATCTTGAATCATTTTCTTCTGCTTACTGGTGTCACTCAACTTCGGCTTTGTCGTTGT AGTTGTTTCTTTTGTGGAGCAAGTATTCTCTGTCTGCTCACGAGGGACAGATGGAAGGAACATCTTATTTCCCAA ACTCACGTCTATTATAATCGATTACCGGGTGACAGGGGAATGGACACCGCCCTGGATGGTATTTCGCCCAGAAAG TGGGAAGAAACTAGCGGAGATGTTGCGAACCAGGATTAG
Gene	>Agabi119p4|669350 ATGGTTCAAATCACTCCGTTGAATGTACCCTCTCCCTCACCTTCCCAGACTGATTTGGTTCACTCTCAGACGCTC TATGTTCTCAGCTCCAGTCAAACCAAGATTCGGTCTTTGCCCTTTGAGCTGTTATCCACTATTTTTCAGCACGCC TGCCCAACTCTCGATATATCTGCTGAAAATCCCATCCCGATGCCCCCCTTCCATCTTGTCCTACGATTGGTGTCG ACATCGTGGTACGACATAGTACAATCGACGCCGCAGTTTTGGGCCACAGTCCTTTTGCCGGAACTATGTGCCGAA AATGTTGATATCAAAGCGCGATATCTGAAGCTTTATCTAGACACTTCGGGCGGGTTGCCTCTCACCTTATCTTTC CGATTTGACAAGAGCTTAAGGGAGGTCGGCTGGTTCGTTTCCTCCATAGTCGACGCCACTTTGGAGCATAGTGCG CATCGGATCAAGGCTCTCCGATTATCACGACCTCCTCGTATCTGGCTGGAAAAATTGATTCCCCAAATGTGCCAG CTTGCTACGATGCACATTGACAATCCTCGACCTGAAAAAAACTGGTCACCCCGACGCGATGAGCGCCTTTTTCTT CCGAAGTCAGTCAATTTTCGGCAAATTTATCTTCGATGTCCTTGCCTCCTTGATTTCCATCTTGCATGCCCAACT CCATCACTTACACACGTCGATTTGGTTGACTGTCCCATCGATTTTGCCATGGAATTTCTTCTTAGATGCCCCAAC TTGATTGACTTCCGCTGTCGGTGTCTCTTACTTTATCCCTTAAAAGTCGAAAATCCCCGTACCATGTTTACGTCT CCCCTCATACGCAGCCGTCTTTCCACGCTTTCCTGGTCCACCAACTACACCCGTGATGGCATTTCTGAATGGGAT AGTGTGTTATTTGAGCTCATTCGTTTTCCGAGCCTGGAAAGGTTCCATTGGTGGGCCGGCTCTTGTCGAGTCATA GTGGATGACACTATACTTGCGTTCCTATCAAGAATTCCGAAATCGATCTCGACTCTCGAACTTGCTGAGGTTGAT ATGACTTTCACAGATGCGATCTTGAATCATTTTCTTCTGCTTACTGGTGTCACTCAACTTCGGCTTTGTCGTTGT AGTTGTTTCTTTTGTGGAGCAAGTATTCTCTGTCTGCTCACGAGGGACAGATGGAAGGAACATCTTATTTCCCAA ACTCACGTCTATTATAATCGATTACCGGGTGACAGGGGAATGGACACCGCCCTGGATGGTATTTCGCCCAGAAAG TGGGAAGAAACTAGCGGAGATGTTGCGAACCAGGATTAG