Fungal Genomics

General Properties

Protein ID	Agabi119p4|668850
Gene name
Location	scaffold_06:1940529..1941714
Strand	+
Gene length (bp)	1185
Transcript length (bp)	1185
Coding sequence length (bp)	1185
Protein length (aa)	395

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12937	F-box-like	F-box-like	3.2E-08	20	79

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0003674	molecular_function	No
GO:0005488	binding	No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	8454
Change Orthofinder run	5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|095650
Agaricus bisporus var bisporus H97	AgabiH97|095650
Agaricus bisporus var burnettii H119p4	Agabi119p4|668850 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|668850 MVWVHPNKLHILNATQSKTRKLPPELLSTIFQHTCPTPDIFDIEHIPIPTPFHLTLRLVSTLWYDVTQSTPQLWT SVFLPTLYLEDIDIRAQYLKLCLNNSGDLPLTLSLRFDPESLQADWYISPVVDATLLHNAHRIRALRLLQPHRCW PKKLIPKMCQLAAMRISSHRPLLNWSKRLDERLFFPNTANMKRIVMDCPCLVDFRLECTMASVTHVELTECPIDF VIELLLRCPNLVDFHCHTSAPPSKAKDPRSMITSPLILSHLSTFTWSNSRILPRSLNWHTVLYEYIHFPALTRFN WVSGPRSFVNNTAHWLPLFKFPKSVSTLELGWVGLDSIEEILNHFSPLAGVTQLRLFKCHYRFVEQAFSLLSQGT DESNTLFPKLTSIKIGPNH*
Coding	>Agabi119p4|668850 ATGGTCTGGGTTCACCCCAACAAACTTCATATTCTCAACGCTACGCAATCCAAGACTCGGAAATTGCCTCCCGAA CTGTTGTCCACCATTTTTCAACACACCTGTCCTACTCCCGATATTTTCGATATAGAACACATCCCAATACCGACA CCCTTCCATTTAACCCTGCGCTTGGTGTCGACCTTATGGTACGACGTAACGCAGTCAACACCCCAGTTGTGGACT TCTGTCTTCCTGCCTACGTTATACCTCGAAGACATCGATATCAGAGCACAATATCTGAAGCTCTGCCTCAACAAT TCTGGAGACTTACCTCTCACGTTGTCTCTCCGGTTTGACCCGGAGTCATTGCAGGCCGACTGGTATATTTCTCCT GTAGTAGATGCCACCTTGCTGCACAATGCGCATCGGATCCGAGCTCTTCGACTGTTACAGCCTCATCGTTGCTGG CCAAAGAAATTAATTCCAAAAATGTGCCAGCTCGCTGCAATGCGTATTTCTAGCCATCGACCTCTTTTAAATTGG TCAAAAAGGCTCGATGAGCGCCTTTTTTTCCCGAACACAGCCAATATGAAACGAATTGTTATGGATTGTCCTTGT CTTGTTGATTTCCGTCTTGAGTGCACAATGGCATCAGTTACACACGTGGAGTTGACTGAATGTCCCATCGACTTT GTCATAGAACTCCTTCTTAGGTGCCCCAACTTGGTTGACTTCCACTGTCATACTTCCGCACCTCCATCCAAAGCA AAAGATCCCCGTAGCATGATTACATCTCCCCTCATACTCAGCCACCTTTCCACATTTACCTGGTCCAACAGTCGA ATCCTCCCTCGCAGTTTGAACTGGCATACCGTGCTATACGAGTACATCCATTTCCCAGCCCTAACGAGGTTCAAT TGGGTGTCCGGTCCGCGTTCATTTGTGAATAACACTGCACATTGGTTGCCGTTATTTAAATTTCCGAAATCGGTT TCTACTCTCGAGCTTGGTTGGGTTGGTCTCGACTCTATAGAAGAGATCTTGAATCATTTTTCCCCACTTGCTGGT GTCACTCAACTTCGGCTTTTTAAGTGTCACTATCGTTTCGTGGAGCAAGCCTTCTCCCTCCTTTCGCAAGGGACA GACGAAAGTAACACTTTATTTCCTAAACTCACGTCTATCAAAATCGGGCCTAATCATTGA
Transcript	>Agabi119p4|668850 ATGGTCTGGGTTCACCCCAACAAACTTCATATTCTCAACGCTACGCAATCCAAGACTCGGAAATTGCCTCCCGAA CTGTTGTCCACCATTTTTCAACACACCTGTCCTACTCCCGATATTTTCGATATAGAACACATCCCAATACCGACA CCCTTCCATTTAACCCTGCGCTTGGTGTCGACCTTATGGTACGACGTAACGCAGTCAACACCCCAGTTGTGGACT TCTGTCTTCCTGCCTACGTTATACCTCGAAGACATCGATATCAGAGCACAATATCTGAAGCTCTGCCTCAACAAT TCTGGAGACTTACCTCTCACGTTGTCTCTCCGGTTTGACCCGGAGTCATTGCAGGCCGACTGGTATATTTCTCCT GTAGTAGATGCCACCTTGCTGCACAATGCGCATCGGATCCGAGCTCTTCGACTGTTACAGCCTCATCGTTGCTGG CCAAAGAAATTAATTCCAAAAATGTGCCAGCTCGCTGCAATGCGTATTTCTAGCCATCGACCTCTTTTAAATTGG TCAAAAAGGCTCGATGAGCGCCTTTTTTTCCCGAACACAGCCAATATGAAACGAATTGTTATGGATTGTCCTTGT CTTGTTGATTTCCGTCTTGAGTGCACAATGGCATCAGTTACACACGTGGAGTTGACTGAATGTCCCATCGACTTT GTCATAGAACTCCTTCTTAGGTGCCCCAACTTGGTTGACTTCCACTGTCATACTTCCGCACCTCCATCCAAAGCA AAAGATCCCCGTAGCATGATTACATCTCCCCTCATACTCAGCCACCTTTCCACATTTACCTGGTCCAACAGTCGA ATCCTCCCTCGCAGTTTGAACTGGCATACCGTGCTATACGAGTACATCCATTTCCCAGCCCTAACGAGGTTCAAT TGGGTGTCCGGTCCGCGTTCATTTGTGAATAACACTGCACATTGGTTGCCGTTATTTAAATTTCCGAAATCGGTT TCTACTCTCGAGCTTGGTTGGGTTGGTCTCGACTCTATAGAAGAGATCTTGAATCATTTTTCCCCACTTGCTGGT GTCACTCAACTTCGGCTTTTTAAGTGTCACTATCGTTTCGTGGAGCAAGCCTTCTCCCTCCTTTCGCAAGGGACA GACGAAAGTAACACTTTATTTCCTAAACTCACGTCTATCAAAATCGGGCCTAATCATTGA
Gene	>Agabi119p4|668850 ATGGTCTGGGTTCACCCCAACAAACTTCATATTCTCAACGCTACGCAATCCAAGACTCGGAAATTGCCTCCCGAA CTGTTGTCCACCATTTTTCAACACACCTGTCCTACTCCCGATATTTTCGATATAGAACACATCCCAATACCGACA CCCTTCCATTTAACCCTGCGCTTGGTGTCGACCTTATGGTACGACGTAACGCAGTCAACACCCCAGTTGTGGACT TCTGTCTTCCTGCCTACGTTATACCTCGAAGACATCGATATCAGAGCACAATATCTGAAGCTCTGCCTCAACAAT TCTGGAGACTTACCTCTCACGTTGTCTCTCCGGTTTGACCCGGAGTCATTGCAGGCCGACTGGTATATTTCTCCT GTAGTAGATGCCACCTTGCTGCACAATGCGCATCGGATCCGAGCTCTTCGACTGTTACAGCCTCATCGTTGCTGG CCAAAGAAATTAATTCCAAAAATGTGCCAGCTCGCTGCAATGCGTATTTCTAGCCATCGACCTCTTTTAAATTGG TCAAAAAGGCTCGATGAGCGCCTTTTTTTCCCGAACACAGCCAATATGAAACGAATTGTTATGGATTGTCCTTGT CTTGTTGATTTCCGTCTTGAGTGCACAATGGCATCAGTTACACACGTGGAGTTGACTGAATGTCCCATCGACTTT GTCATAGAACTCCTTCTTAGGTGCCCCAACTTGGTTGACTTCCACTGTCATACTTCCGCACCTCCATCCAAAGCA AAAGATCCCCGTAGCATGATTACATCTCCCCTCATACTCAGCCACCTTTCCACATTTACCTGGTCCAACAGTCGA ATCCTCCCTCGCAGTTTGAACTGGCATACCGTGCTATACGAGTACATCCATTTCCCAGCCCTAACGAGGTTCAAT TGGGTGTCCGGTCCGCGTTCATTTGTGAATAACACTGCACATTGGTTGCCGTTATTTAAATTTCCGAAATCGGTT TCTACTCTCGAGCTTGGTTGGGTTGGTCTCGACTCTATAGAAGAGATCTTGAATCATTTTTCCCCACTTGCTGGT GTCACTCAACTTCGGCTTTTTAAGTGTCACTATCGTTTCGTGGAGCAAGCCTTCTCCCTCCTTTCGCAAGGGACA GACGAAAGTAACACTTTATTTCCTAAACTCACGTCTATCAAAATCGGGCCTAATCATTGA