Fungal Genomics

at Utrecht University

General Properties

Protein ID	Agabi119p4\|661700
Gene name
Location	scaffold_06:765605..767304
Strand	-
Gene length (bp)	1699
Transcript length (bp)	1272
Coding sequence length (bp)	1272
Protein length (aa)	424

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13424	TPR_12	Tetratricopeptide repeat	3.0E-07	40	83
PF10516	SHNi-TPR	SHNi-TPR	4.5E-11	189	224

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9USQ4\|SIM3_SCHPO	NASP-related protein sim3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sim3 PE=1 SV=1	29	381	2.0E-29
sp\|P06180\|HIBN_XENLA	Histone-binding protein N1/N2 OS=Xenopus laevis PE=1 SV=3	157	277	3.0E-12
sp\|Q02508\|HGV2_HALRO	Protein HGV2 OS=Halocynthia roretzi GN=HGV2 PE=2 SV=1	153	273	1.0E-11
sp\|Q66HD3\|NASP_RAT	Nuclear autoantigenic sperm protein OS=Rattus norvegicus GN=Nasp PE=1 SV=1	148	273	2.0E-11
sp\|Q2T9P4\|NASP_BOVIN	Nuclear autoantigenic sperm protein OS=Bos taurus GN=NASP PE=2 SV=2	148	269	3.0E-11

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9USQ4\|SIM3_SCHPO	NASP-related protein sim3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sim3 PE=1 SV=1	29	381	2.0E-29
sp\|P06180\|HIBN_XENLA	Histone-binding protein N1/N2 OS=Xenopus laevis PE=1 SV=3	157	277	3.0E-12
sp\|Q02508\|HGV2_HALRO	Protein HGV2 OS=Halocynthia roretzi GN=HGV2 PE=2 SV=1	153	273	1.0E-11
sp\|Q66HD3\|NASP_RAT	Nuclear autoantigenic sperm protein OS=Rattus norvegicus GN=Nasp PE=1 SV=1	148	273	2.0E-11
sp\|Q2T9P4\|NASP_BOVIN	Nuclear autoantigenic sperm protein OS=Bos taurus GN=NASP PE=2 SV=2	148	269	3.0E-11
sp\|Q99MD9\|NASP_MOUSE	Nuclear autoantigenic sperm protein OS=Mus musculus GN=Nasp PE=1 SV=2	148	271	3.0E-11
sp\|P27123\|NASP_RABIT	Nuclear autoantigenic sperm protein (Fragment) OS=Oryctolagus cuniculus GN=NASP PE=2 SV=2	149	269	5.0E-11
sp\|P49321\|NASP_HUMAN	Nuclear autoantigenic sperm protein OS=Homo sapiens GN=NASP PE=1 SV=2	148	269	7.0E-11

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 70	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4\|661700 MASNEMTTQTPPAPVSNAPNDEINAPTTLESALEQAKRAFALKKYEQAVDFYATALEFATKEHGDDSPLTADLYF SYGRALLENAVSQSGVLGKGQPEAPVEEEPPVNSADGPILSFSGDAEEEDPAVDLFASAENAVVEEEKAAAAEEE EDEPEDDFNAAWEVLDLARAIYDRQVQQDGDDEIRLKLADTYIALGDVSLETEKFDQAIQDYEAGLKHKVDLLPT SSRQIAEAHYKLSMVLDLTSGRLSDAISHAENALESVEARLVELLHGLSGELPPLPEEPPTDSKGKGKAVTRLVR DDVIQRMSSQRIEAEIKELTGLRDDLALKVEELKTSPNEILDQSAPALAAQALDKELNMEIKSAILPQVVNDLTG IVKKKKKVATAETEASDSPSTEANGAKRKAEEEAEASSTEKKARLESS*
Coding	>Agabi119p4\|661700 ATGGCCTCAAACGAAATGACGACCCAAACACCACCGGCACCCGTATCAAACGCGCCAAACGATGAGATAAACGCA CCAACGACGTTGGAAAGTGCTCTGGAACAGGCCAAACGCGCTTTTGCACTGAAGAAATATGAGCAGGCGGTGGAT TTTTATGCTACGGCTTTGGAATTTGCGACGAAGGAACATGGAGATGATTCGCCACTGACTGCGGATTTGTATTTC TCCTATGGGCGCGCCCTGCTTGAGAATGCGGTTTCTCAAAGTGGAGTACTTGGCAAAGGGCAGCCCGAGGCTCCT GTGGAAGAGGAACCTCCAGTCAACTCTGCTGATGGACCAATTTTATCATTTTCGGGAGACGCAGAAGAGGAAGAT CCTGCAGTTGACTTATTTGCAAGTGCAGAGAATGCTGTTGTAGAAGAAGAAAAGGCTGCTGCTGCGGAAGAAGAA GAGGATGAACCTGAAGATGATTTTAATGCTGCTTGGGAAGTTCTGGACCTTGCTCGAGCTATTTATGATAGGCAG GTGCAGCAGGATGGAGATGATGAAATAAGACTTAAATTGGCAGACACTTACATTGCCTTGGGCGATGTCTCGCTG GAAACGGAAAAATTCGACCAGGCGATCCAAGATTATGAAGCGGGTCTCAAGCACAAAGTTGATCTCCTTCCAACA TCCTCTCGTCAGATAGCCGAAGCGCACTATAAGCTTAGTATGGTGCTGGATCTTACCTCCGGGCGTCTATCAGAT GCCATTTCTCATGCGGAAAATGCCCTCGAAAGTGTTGAGGCAAGGTTGGTAGAACTTCTGCATGGGTTGAGTGGT GAACTGCCACCTCTTCCTGAAGAACCACCTACAGACTCGAAAGGCAAAGGAAAGGCTGTCACCAGGCTTGTAAGG GACGATGTGATACAGCGGATGTCTAGTCAGCGGATAGAAGCCGAAATCAAGGAGTTGACAGGATTAAGGGATGAT TTAGCTTTGAAGGTTGAAGAACTTAAGACGTCACCGAATGAAATTCTGGACCAGAGTGCACCTGCACTTGCGGCT CAAGCTCTTGACAAAGAATTGAACATGGAGATAAAGTCCGCCATTTTGCCTCAGGTCGTGAACGACCTGACCGGT ATCGTCAAAAAGAAAAAGAAAGTGGCAACAGCCGAAACCGAGGCCTCTGATAGCCCATCCACGGAAGCGAATGGT GCAAAGAGAAAGGCAGAAGAGGAAGCGGAGGCGTCAAGTACGGAAAAGAAGGCCAGACTGGAGTCGTCATAA
Transcript	>Agabi119p4\|661700 ATGGCCTCAAACGAAATGACGACCCAAACACCACCGGCACCCGTATCAAACGCGCCAAACGATGAGATAAACGCA CCAACGACGTTGGAAAGTGCTCTGGAACAGGCCAAACGCGCTTTTGCACTGAAGAAATATGAGCAGGCGGTGGAT TTTTATGCTACGGCTTTGGAATTTGCGACGAAGGAACATGGAGATGATTCGCCACTGACTGCGGATTTGTATTTC TCCTATGGGCGCGCCCTGCTTGAGAATGCGGTTTCTCAAAGTGGAGTACTTGGCAAAGGGCAGCCCGAGGCTCCT GTGGAAGAGGAACCTCCAGTCAACTCTGCTGATGGACCAATTTTATCATTTTCGGGAGACGCAGAAGAGGAAGAT CCTGCAGTTGACTTATTTGCAAGTGCAGAGAATGCTGTTGTAGAAGAAGAAAAGGCTGCTGCTGCGGAAGAAGAA GAGGATGAACCTGAAGATGATTTTAATGCTGCTTGGGAAGTTCTGGACCTTGCTCGAGCTATTTATGATAGGCAG GTGCAGCAGGATGGAGATGATGAAATAAGACTTAAATTGGCAGACACTTACATTGCCTTGGGCGATGTCTCGCTG GAAACGGAAAAATTCGACCAGGCGATCCAAGATTATGAAGCGGGTCTCAAGCACAAAGTTGATCTCCTTCCAACA TCCTCTCGTCAGATAGCCGAAGCGCACTATAAGCTTAGTATGGTGCTGGATCTTACCTCCGGGCGTCTATCAGAT GCCATTTCTCATGCGGAAAATGCCCTCGAAAGTGTTGAGGCAAGGTTGGTAGAACTTCTGCATGGGTTGAGTGGT GAACTGCCACCTCTTCCTGAAGAACCACCTACAGACTCGAAAGGCAAAGGAAAGGCTGTCACCAGGCTTGTAAGG GACGATGTGATACAGCGGATGTCTAGTCAGCGGATAGAAGCCGAAATCAAGGAGTTGACAGGATTAAGGGATGAT TTAGCTTTGAAGGTTGAAGAACTTAAGACGTCACCGAATGAAATTCTGGACCAGAGTGCACCTGCACTTGCGGCT CAAGCTCTTGACAAAGAATTGAACATGGAGATAAAGTCCGCCATTTTGCCTCAGGTCGTGAACGACCTGACCGGT ATCGTCAAAAAGAAAAAGAAAGTGGCAACAGCCGAAACCGAGGCCTCTGATAGCCCATCCACGGAAGCGAATGGT GCAAAGAGAAAGGCAGAAGAGGAAGCGGAGGCGTCAAGTACGGAAAAGAAGGCCAGACTGGAGTCGTCATAA
Gene	>Agabi119p4\|661700 ATGGCCTCGTGCGTAATTCATTGTATTTCTACGATCGCGCTGTACACGAATGCTCTTGTCACAGAAACGAAATGA CGACCCAAACACCACCGGCACCCGTATCAAACGCGCCAAACGATGAGATAAACGCACCAACGACGTTGGAAAGTG CTCTGGAACAGGCCAAACGCGCTTTTGCACTGAAGAAATATGAGCAGGCGGTGGATTTTTATGCTACGGCTTTGG AATTTGCGTGAGTTGCTTTTGTGAATCCATCCTTTTTTCTGCTTGCGTGAACGAGGTCAAAGGGCGTCATGCTAT TGTTCCTTGCCACGGTATCGTGCAACTTTGACGCGTCCCAACTTCTTCCCTTCAATTTCTATCGTACGGGCATAT CTTTTACACGTATGCTGACCCGAAATTCTGCGAATCTTCCAGGACGAAGGAACATGGAGATGATTCGCCACTGAC TGCGGATTTGTATTTCTCCTATGGGCGCGCCCTGCTTGAGAATGCGGTTTCTCAAAGTGGAGTACTTGGCAAAGG GCAGCCCGAGGCTCCTGTGGAAGAGGAACCTCCAGGTGCGTGTATTTTAGCTAACAGTCATCGTTTTCGCTAACT TGAAGTCTCAAAATTGTTTCTGATTTCCGCAGTCAACTCTGCTGATGGACCAATTTTATCATTTTCGGGAGACGC AGAAGAGGAAGATCCTGCAGTTGACTTATTTGCAAGTGCAGAGAATGCTGTTGTAGAAGAAGAAAAGGCTGCTGC TGCGGAAGAAGAAGAGGATGAACCTGAAGATGATTTTAATGCTGCTTGGGAAGTTCTGGACCTTGCTCGAGCTAT TTATGATAGGCAGGTGCAGCAGGATGGAGATGATGAAATAAGACTTAAATTGGCAGACACTTACATTGCCTTGGG CGATGTCTCGCTGGAAACGGGTAGGTGATAAACTTTCCCCCTTACTTAATGTGCAATGACACTAAAAGGTTTGTA TAGAAAAATTCGACCAGGCGATCCAAGATTATGAAGCGGGTCTCAAGCACAAAGTTGATCTCCTTCCAACATCCT CTCGTCAGATAGCCGAAGCGCACTATAAGCTTAGTATGGTGCTGGATCTTACCTCCGGGCGTCTATCAGATGCCA TTTCTCATGCGGAAAATGCCCTCGAAAGTGTTGAGGCAAGGTTGGTAGAACTTCTGCATGGGTTGAGTGGTGAAC TGCCACCTCTTCCTGAAGAACCACCTACAGACTCGAAAGGCAAAGGAAAGGCTGTCACCAGGCTTGTAAGGGACG ATGTGATACAGCGGATGTCTAGTCAGCGGATAGAAGCCGAAATCAAGGAGTTGACAGGATTAAGGGATGATTTAG CTTTGAAGGTTAGTAAGAAACTGCAGTCGGCAGTTTACTATGTCTTTTCTAATTAGATTATTAGGTTGAAGAACT TAAGACGTCACCGAATGAAATTCTGGACCAGAGTGCACCTGCACTTGCGGCTCAAGCTCTTGACAAAGAATTGAA CATGGAGATAAAGTCCGCCATTTTGCCTCAGGTCGTGAACGACCTGACCGGTATCGTCAAAAAGAAAAAGAAAGT GGCAACAGCCGAAACCGAGGCCTCTGATAGCCCATCCACGGAAGCGAATGGTGCAAAGAGAAAGGCAGAAGAGGA AGCGGAGGCGTCAAGTACGGAAAAGAAGGCCAGACTGGAGTCGTCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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