Fungal Genomics

General Properties

Protein ID	Agabi119p4|661400
Gene name
Location	scaffold_06:751682..752584
Strand	-
Gene length (bp)	902
Transcript length (bp)	687
Coding sequence length (bp)	687
Protein length (aa)	229

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12937	F-box-like	F-box-like	5.4E-07	2	40
PF00646	F-box	F-box domain	7.8E-06	3	39

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0003674	molecular_function	No
GO:0005488	binding	No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	8406
Change Orthofinder run	5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|378800
Agaricus bisporus var bisporus H97	AgabiH97|091220
Agaricus bisporus var burnettii H119p4	Agabi119p4|661400 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|661400 MITSLPSEILVKILVNLGSLELARISGVCRFWKALLENDTYLRCVCFKEPSPYFYVEGCEPILAPGPQDARIRFH PIIGRVCYQMGEAMSSIRIRDPKNHGPCLTDLTLQDHYATIPRTTRLDIEIISEENQNNRCKTVLPGIKLSISNP AGIRLRDFFSNIVAETTQMCDLVAYASGGICHQRVQPSLTFLKKAEILGKCKSYAGIESTEISKEGVINVKLCTV AKL*
Coding	>Agabi119p4|661400 ATGATCACCTCTCTGCCTTCTGAAATTCTTGTCAAAATTCTCGTAAACCTCGGCAGCCTTGAACTCGCCAGGATA TCTGGTGTTTGTCGATTTTGGAAAGCCCTCCTAGAGAATGATACCTACTTGCGCTGTGTATGCTTCAAAGAGCCC TCTCCATATTTTTACGTTGAAGGATGCGAACCTATACTGGCGCCAGGCCCTCAAGACGCTCGCATAAGATTCCAC CCAATTATAGGACGTGTATGTTATCAAATGGGAGAAGCCATGTCTTCTATCCGTATCCGTGACCCCAAGAACCAC GGTCCTTGTCTTACAGATCTCACTCTCCAAGACCACTATGCCACAATCCCTCGCACCACTCGCCTGGATATTGAA ATTATATCAGAGGAGAATCAAAACAACCGCTGCAAAACAGTCCTTCCAGGGATCAAACTTTCTATATCAAACCCA GCCGGCATTCGATTACGCGACTTCTTTTCTAACATTGTTGCAGAAACCACACAAATGTGCGATCTGGTCGCTTAT GCCAGCGGGGGTATTTGCCATCAACGGGTGCAGCCTTCTCTCACATTTTTAAAGAAGGCAGAGATTCTGGGGAAA TGCAAGTCTTATGCAGGCATTGAAAGCACGGAAATCAGTAAAGAGGGTGTTATCAACGTTAAGCTATGCACGGTG GCAAAATTGTGA
Transcript	>Agabi119p4|661400 ATGATCACCTCTCTGCCTTCTGAAATTCTTGTCAAAATTCTCGTAAACCTCGGCAGCCTTGAACTCGCCAGGATA TCTGGTGTTTGTCGATTTTGGAAAGCCCTCCTAGAGAATGATACCTACTTGCGCTGTGTATGCTTCAAAGAGCCC TCTCCATATTTTTACGTTGAAGGATGCGAACCTATACTGGCGCCAGGCCCTCAAGACGCTCGCATAAGATTCCAC CCAATTATAGGACGTGTATGTTATCAAATGGGAGAAGCCATGTCTTCTATCCGTATCCGTGACCCCAAGAACCAC GGTCCTTGTCTTACAGATCTCACTCTCCAAGACCACTATGCCACAATCCCTCGCACCACTCGCCTGGATATTGAA ATTATATCAGAGGAGAATCAAAACAACCGCTGCAAAACAGTCCTTCCAGGGATCAAACTTTCTATATCAAACCCA GCCGGCATTCGATTACGCGACTTCTTTTCTAACATTGTTGCAGAAACCACACAAATGTGCGATCTGGTCGCTTAT GCCAGCGGGGGTATTTGCCATCAACGGGTGCAGCCTTCTCTCACATTTTTAAAGAAGGCAGAGATTCTGGGGAAA TGCAAGTCTTATGCAGGCATTGAAAGCACGGAAATCAGTAAAGAGGGTGTTATCAACGTTAAGCTATGCACGGTG GCAAAATTGTGA
Gene	>Agabi119p4|661400 ATGATCACCTCTCTGCCTTCTGAAATTCTTGTCAAAATTCTCGTAAACCTCGGCAGCCTTGAACTCGCCAGGATA TCTGGTGTTTGTCGATTTTGGAAAGCCCTCCTAGAGAATGATACCTACTTGCGCTGTGTATGCTTCAAAGAGCCC TCTCCATATTTTTACGTTGAAGGTATCTCATTCGGCAACTTGCCATTTTATACTGAAGGTTAATCAGCCGTTCTG AAGGATGCGAACCTATACTGGCGCCAGGCCCTCAAGACGCTCGCATAAGAGTATAGCGTATCTACCTCTTCCTTT CTCACTCTCTGGCTCAACTTTGCCCCAGTTCCACCCAATTATAGGACGTGTATGTTATCAAATGGGAGAAGCCAT GTCTTCTATCCGTATCCGTGACCCCAAGAACCACGGTCCTTGTCTTACAGATCTCACTCTCCAAGACCACTATGC CACAATCCCTCGCACCACTCGCCTGGATATTGAAATTATATCAGAGGAGAATCAAAACAACCGCTGCAAAACAGT CCTTCCAGGGATCAAACTTTCTATATCAAACCCAGCCGGCATTCGATTACGCGACTTCTTTTCTAACATTGTTGC AGAGTAGGGAAAAGGGTTTATGTCCACTGCTCTCTACTCACATCTCAAATTTTCAGAACCACACAAATGTGCGAT CTGGTCGCTTATGCCAGCGGGGGTATTTGCCATCAACGGGTGCAGCCTTCTCTCACATTTTTAAAGAAGGCAGAG ATTCTGGGGAAATGCAAGTACGTATTTAACATTCAGAAAAAATTGTAACCTAGTCCAAACACATCCGTAGGTCTT ATGCAGGCATTGAAAGCACGGAAATCAGTAAAGAGGGTGTTATCAACGTTAAGCTATGCACGGTGGCAAAATTGT GA