Fungal Genomics

at Utrecht University

General Properties

Protein ID	Agabi119p4\|658500
Gene name
Location	scaffold_06:330284..330724
Strand	-
Gene length (bp)	440
Transcript length (bp)	339
Coding sequence length (bp)	339
Protein length (aa)	113

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01185	Hydrophobin	Fungal hydrophobin	6.7E-16	31	108

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|O13300\|HYP3_AGABI	Hydrophobin-3 OS=Agaricus bisporus GN=abh3 PE=3 SV=1	1	112	1.0E-37
sp\|P04158\|SC1_SCHCO	Fruiting body protein SC1 OS=Schizophyllum commune GN=SC1 PE=2 SV=2	11	110	4.0E-19
sp\|O74300\|SC6_SCHCO	Hydrophobin-6 OS=Schizophyllum commune GN=SC6 PE=3 SV=1	26	106	4.0E-11
sp\|P16933\|SC3_SCHCO	Fruiting body protein SC3 OS=Schizophyllum commune GN=SC3 PE=1 SV=2	1	110	4.0E-10
sp\|O43122\|HYP4_AGABI	Hydrophobin-B OS=Agaricus bisporus GN=hypB PE=3 SV=1	26	112	9.0E-08

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|O13300\|HYP3_AGABI	Hydrophobin-3 OS=Agaricus bisporus GN=abh3 PE=3 SV=1	1	112	1.0E-37
sp\|P04158\|SC1_SCHCO	Fruiting body protein SC1 OS=Schizophyllum commune GN=SC1 PE=2 SV=2	11	110	4.0E-19
sp\|O74300\|SC6_SCHCO	Hydrophobin-6 OS=Schizophyllum commune GN=SC6 PE=3 SV=1	26	106	4.0E-11
sp\|P16933\|SC3_SCHCO	Fruiting body protein SC3 OS=Schizophyllum commune GN=SC3 PE=1 SV=2	1	110	4.0E-10
sp\|O43122\|HYP4_AGABI	Hydrophobin-B OS=Agaricus bisporus GN=hypB PE=3 SV=1	26	112	9.0E-08
sp\|P49072\|HYP1_AGABI	Hydrophobin-1 OS=Agaricus bisporus GN=hypA PE=2 SV=1	1	112	7.0E-07
sp\|P49073\|HYP2_AGABI	Hydrophobin-2 OS=Agaricus bisporus GN=hypC PE=3 SV=2	1	112	3.0E-06
sp\|P16934\|SC4_SCHCO	Fruiting body protein SC4 OS=Schizophyllum commune GN=SC4 PE=2 SV=1	31	110	7.0E-06

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GO

GO Term	Description	Terminal node
GO:0005199	structural constituent of cell wall	Yes
GO:0009277	fungal-type cell wall	Yes
GO:0005198	structural molecule activity	No
GO:0030312	external encapsulating structure	No
GO:0005618	cell wall	No
GO:0110165	cellular anatomical entity	No
GO:0003674	molecular_function	No
GO:0005575	cellular_component	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 23	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	7	29	22
2	49	71	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4\|658500 MFARVSAVFNVLFFVMLAAASAVPRTTPPQCNGGTIQCCNALYEVTSPIIGIVANPLGILLGPFDGLVGIFCTPV DIIGGGNSCSQQAACCTGTSYGDGVIITRCSPITLDV*
Coding	>Agabi119p4\|658500 ATGTTCGCTCGCGTCAGTGCCGTCTTCAATGTATTGTTCTTCGTCATGCTCGCCGCAGCCAGCGCTGTTCCCCGC ACTACTCCCCCGCAGTGCAATGGCGGTACCATCCAATGCTGCAATGCTCTTTATGAGGTCACTAGCCCCATCATC GGAATCGTTGCTAATCCTCTCGGCATTCTCCTGGGTCCCTTCGACGGCCTTGTTGGTATCTTTTGCACCCCCGTC GATATCATCGGTGGCGGTAATTCTTGCTCTCAGCAAGCAGCTTGTTGCACTGGCACCAGTTACGGCGATGGTGTT ATTATCACTCGCTGCAGCCCCATCACCCTTGATGTTTAA
Transcript	>Agabi119p4\|658500 ATGTTCGCTCGCGTCAGTGCCGTCTTCAATGTATTGTTCTTCGTCATGCTCGCCGCAGCCAGCGCTGTTCCCCGC ACTACTCCCCCGCAGTGCAATGGCGGTACCATCCAATGCTGCAATGCTCTTTATGAGGTCACTAGCCCCATCATC GGAATCGTTGCTAATCCTCTCGGCATTCTCCTGGGTCCCTTCGACGGCCTTGTTGGTATCTTTTGCACCCCCGTC GATATCATCGGTGGCGGTAATTCTTGCTCTCAGCAAGCAGCTTGTTGCACTGGCACCAGTTACGGCGATGGTGTT ATTATCACTCGCTGCAGCCCCATCACCCTTGATGTTTAA
Gene	>Agabi119p4\|658500 ATGTTCGCTCGCGTCAGTGCCGTCTTCAATGTATTGTTCTTCGTCATGCTCGCCGCAGCCAGCGCTGTTCCCCGC ACTACTCCCCCGCAGTGCAATGGCGGTACCATCCAATGCTGTAAGTTTACATAGCCATCCTCTGAACACAATCTC AACTACTCTCCAGGCAATGCTCTTTATGAGGTCACTAGCCCCATCATCGGAATCGTTGCTAATCCTCTCGGCATT CTCCTGGGTCCCTTCGACGGCCTTGTTGGTATCTTTTGCACCCCCGTCGATATCATCGGTGGCGGTAATTCTTGG TTCGTACTCTCAAATACCGAGCAGGAGATGTCACTCACGAGCGAATCAATAGCTCTCAGCAAGCAGCTTGTTGCA CTGGCACCAGTTACGGCGATGGTGTTATTATCACTCGCTGCAGCCCCATCACCCTTGATGTTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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