Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|658250
Gene name
Locationscaffold_06:316831..318188
Strand+
Gene length (bp)1357
Transcript length (bp)1257
Coding sequence length (bp)1257
Protein length (aa) 419

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01753 zf-MYND MYND finger 9.2E-08 245 281

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 66 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|658250
MSATEDESLSREDVMHVLKGMNIEFSPNTKLTSTTLRHRLIQSLDAAQRFASIFPDPTHLIKLSRYSMWRKKAPV
VDAFSRRTWGAIFQDNRGFEDHRQIAFARINQLIPDIAKEMDKKKIGYVVLKDMATLRALIIRFFAIYEINDRTP
LLLVNYACLEEDDEEALDDTITDYTPEEQRGRAYQMTDIEQDLLIELLSLNRGHLSPEYKITEAAFDDRCEVGFI
LPIGGLNVKDIIRLSKPKGCLLCGEETHSTCSACLSAQYCGKVCQKEDWRNHKSLCKAISSGKWYTIELDPNPFS
TMMSKMYKTSINRYDDTDDDTPTHNAEGVEEPPPNPYEDDYYLVKLQVPIGAEANQMLVHDRYKTFELHLTDMKN
PEAFTAAMLAVALEPKMYRWAHREGEWNWKICFDRLPDQTPTW*
Coding >Agabi119p4|658250
ATGTCCGCCACCGAGGACGAGAGTCTTTCCAGAGAGGATGTCATGCACGTCCTTAAGGGAATGAACATAGAATTC
TCTCCAAACACAAAGCTCACCAGCACCACACTCCGTCACCGGCTAATCCAATCCCTCGACGCTGCACAGCGATTC
GCCTCCATCTTCCCCGATCCGACACATTTAATCAAGCTCTCCAGGTATTCAATGTGGAGAAAGAAAGCACCTGTC
GTTGATGCTTTCTCCCGGCGTACCTGGGGAGCCATTTTCCAAGACAACAGAGGGTTCGAAGATCACCGACAGATT
GCATTTGCTAGGATCAACCAGCTCATCCCCGATATTGCGAAGGAAATGGACAAGAAGAAAATTGGATACGTGGTT
CTCAAGGACATGGCTACCTTAAGAGCTTTGATCATCCGGTTTTTTGCTATATACGAAATCAATGACAGAACCCCT
CTTCTTCTCGTAAACTATGCCTGCCTTGAAGAAGATGACGAAGAAGCCCTGGACGACACAATCACGGATTACACA
CCCGAAGAACAACGTGGCCGGGCATATCAGATGACTGACATAGAGCAGGATCTGCTCATCGAGTTGCTGTCTCTG
AATCGGGGGCATCTCTCTCCCGAATACAAGATCACGGAAGCCGCTTTCGATGATCGCTGTGAAGTGGGCTTCATC
CTTCCGATTGGCGGTCTCAATGTAAAGGACATTATCCGTCTGAGTAAGCCGAAAGGTTGTTTACTGTGCGGCGAA
GAGACCCACAGCACCTGTTCTGCCTGTTTATCGGCTCAGTACTGCGGTAAAGTTTGTCAGAAAGAAGACTGGAGA
AATCACAAATCCCTATGCAAAGCGATTTCTTCAGGTAAATGGTACACCATCGAGCTCGACCCTAACCCATTCTCC
ACCATGATGTCGAAAATGTACAAGACGAGCATCAACCGCTACGACGACACTGATGATGACACCCCTACCCATAAT
GCTGAAGGCGTTGAGGAGCCCCCGCCTAATCCATACGAGGACGATTACTATTTGGTTAAGCTTCAAGTTCCTATT
GGAGCTGAAGCTAATCAAATGCTCGTCCACGATCGTTACAAAACTTTTGAATTACATCTCACAGATATGAAGAAT
CCAGAAGCGTTTACAGCGGCCATGCTTGCTGTAGCTCTTGAGCCAAAGATGTATAGGTGGGCTCACCGTGAGGGT
GAATGGAATTGGAAGATATGCTTCGATCGGCTCCCTGATCAAACACCGACATGGTAG
Transcript >Agabi119p4|658250
ATGTCCGCCACCGAGGACGAGAGTCTTTCCAGAGAGGATGTCATGCACGTCCTTAAGGGAATGAACATAGAATTC
TCTCCAAACACAAAGCTCACCAGCACCACACTCCGTCACCGGCTAATCCAATCCCTCGACGCTGCACAGCGATTC
GCCTCCATCTTCCCCGATCCGACACATTTAATCAAGCTCTCCAGGTATTCAATGTGGAGAAAGAAAGCACCTGTC
GTTGATGCTTTCTCCCGGCGTACCTGGGGAGCCATTTTCCAAGACAACAGAGGGTTCGAAGATCACCGACAGATT
GCATTTGCTAGGATCAACCAGCTCATCCCCGATATTGCGAAGGAAATGGACAAGAAGAAAATTGGATACGTGGTT
CTCAAGGACATGGCTACCTTAAGAGCTTTGATCATCCGGTTTTTTGCTATATACGAAATCAATGACAGAACCCCT
CTTCTTCTCGTAAACTATGCCTGCCTTGAAGAAGATGACGAAGAAGCCCTGGACGACACAATCACGGATTACACA
CCCGAAGAACAACGTGGCCGGGCATATCAGATGACTGACATAGAGCAGGATCTGCTCATCGAGTTGCTGTCTCTG
AATCGGGGGCATCTCTCTCCCGAATACAAGATCACGGAAGCCGCTTTCGATGATCGCTGTGAAGTGGGCTTCATC
CTTCCGATTGGCGGTCTCAATGTAAAGGACATTATCCGTCTGAGTAAGCCGAAAGGTTGTTTACTGTGCGGCGAA
GAGACCCACAGCACCTGTTCTGCCTGTTTATCGGCTCAGTACTGCGGTAAAGTTTGTCAGAAAGAAGACTGGAGA
AATCACAAATCCCTATGCAAAGCGATTTCTTCAGGTAAATGGTACACCATCGAGCTCGACCCTAACCCATTCTCC
ACCATGATGTCGAAAATGTACAAGACGAGCATCAACCGCTACGACGACACTGATGATGACACCCCTACCCATAAT
GCTGAAGGCGTTGAGGAGCCCCCGCCTAATCCATACGAGGACGATTACTATTTGGTTAAGCTTCAAGTTCCTATT
GGAGCTGAAGCTAATCAAATGCTCGTCCACGATCGTTACAAAACTTTTGAATTACATCTCACAGATATGAAGAAT
CCAGAAGCGTTTACAGCGGCCATGCTTGCTGTAGCTCTTGAGCCAAAGATGTATAGGTGGGCTCACCGTGAGGGT
GAATGGAATTGGAAGATATGCTTCGATCGGCTCCCTGATCAAACACCGACATGGTAG
Gene >Agabi119p4|658250
ATGTCCGCCACCGAGGACGAGAGTCTTTCCAGAGAGGATGTCATGCACGTCCTTAAGGGAATGAACATAGAATTC
TCTCCAAACACAAAGCTCACCAGCACCACACTCCGTCACCGGCTAATCCAATCCCTCGACGCTGCACAGCGATTC
GCCTCCATCTTCCCCGATCCGACACATTTAATCAAGCTCTCCAGGTATTCAATGTGGAGAAAGAAAGCACCTGTC
GTTGATGCTTTCTCCCGGCGTACCTGGGGAGCCATTTTCCAAGACAACAGAGGGTTCGAAGATCACCGACAGATT
GCATTTGCTAGGATCAACCAGCTCATCCCCGATATTGCGAAGGAAATGGACAAGAAGAAAATTGGATACGTGGTT
CTCAAGGACATGGCTACCTTAAGAGCTTTGATCATCCGGGTGAGCATCCTTATCGTCGTCCCGCAGCTCTCAATC
TGAGTGTCCCAGCAAAGTTTTTTGCTATATACGAAATCAATGACAGAACCCCTCTTCTTCTCGTAAACTATGCCT
GCCTTGAAGAAGATGACGAAGAAGCCCTGGACGACACAATCACGGATTACACACCCGAAGAACAACGTGGCCGGG
CATATCAGATGACTGACATAGAGCAGGATCTGCTCATCGAGTTGCTGTCTCTGAATCGGGGGCATCTCTCTCCCG
AATACAAGATCACGGAAGCCGCTTTCGATGATCGCTGTGAAGTGGGCTTCATCCTTCCGATTGGCGGTCTCAATG
TAAAGGACATTATCCGTCTGAGTAAGCCGAAAGGTTGTTTACTGTGCGGCGAAGAGACCCACAGCACCTGTTCTG
CCTGTTTATCGGCTCAGTACTGCGGTAAAGGTGAGGTTCGTTGTTCTCTCTTCTTCTTCATCATTGACGTCTATA
AGTTTGTCAGAAAGAAGACTGGAGAAATCACAAATCCCTATGCAAAGCGATTTCTTCAGGTAAATGGTACACCAT
CGAGCTCGACCCTAACCCATTCTCCACCATGATGTCGAAAATGTACAAGACGAGCATCAACCGCTACGACGACAC
TGATGATGACACCCCTACCCATAATGCTGAAGGCGTTGAGGAGCCCCCGCCTAATCCATACGAGGACGATTACTA
TTTGGTTAAGCTTCAAGTTCCTATTGGAGCTGAAGCTAATCAAATGCTCGTCCACGATCGTTACAAAACTTTTGA
ATTACATCTCACAGATATGAAGAATCCAGAAGCGTTTACAGCGGCCATGCTTGCTGTAGCTCTTGAGCCAAAGAT
GTATAGGTGGGCTCACCGTGAGGGTGAATGGAATTGGAAGATATGCTTCGATCGGCTCCCTGATCAAACACCGAC
ATGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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