Fungal Genomics

at Utrecht University

General Properties

Protein ID	Agabi119p4\|657850
Gene name
Location	scaffold_06:297982..298445
Strand	-
Gene length (bp)	463
Transcript length (bp)	357
Coding sequence length (bp)	357
Protein length (aa)	119

Overview

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01185	Hydrophobin	Fungal hydrophobin	8.7E-21	40	114

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|O13300\|HYP3_AGABI	Hydrophobin-3 OS=Agaricus bisporus GN=abh3 PE=3 SV=1	1	118	4.0E-72
sp\|P04158\|SC1_SCHCO	Fruiting body protein SC1 OS=Schizophyllum commune GN=SC1 PE=2 SV=2	9	118	2.0E-22
sp\|P16933\|SC3_SCHCO	Fruiting body protein SC3 OS=Schizophyllum commune GN=SC3 PE=1 SV=2	1	116	1.0E-20
sp\|P49072\|HYP1_AGABI	Hydrophobin-1 OS=Agaricus bisporus GN=hypA PE=2 SV=1	5	118	2.0E-15
sp\|O74300\|SC6_SCHCO	Hydrophobin-6 OS=Schizophyllum commune GN=SC6 PE=3 SV=1	28	116	2.0E-15

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|O13300\|HYP3_AGABI	Hydrophobin-3 OS=Agaricus bisporus GN=abh3 PE=3 SV=1	1	118	4.0E-72
sp\|P04158\|SC1_SCHCO	Fruiting body protein SC1 OS=Schizophyllum commune GN=SC1 PE=2 SV=2	9	118	2.0E-22
sp\|P16933\|SC3_SCHCO	Fruiting body protein SC3 OS=Schizophyllum commune GN=SC3 PE=1 SV=2	1	116	1.0E-20
sp\|P49072\|HYP1_AGABI	Hydrophobin-1 OS=Agaricus bisporus GN=hypA PE=2 SV=1	5	118	2.0E-15
sp\|O74300\|SC6_SCHCO	Hydrophobin-6 OS=Schizophyllum commune GN=SC6 PE=3 SV=1	28	116	2.0E-15
sp\|O43122\|HYP4_AGABI	Hydrophobin-B OS=Agaricus bisporus GN=hypB PE=3 SV=1	32	118	2.0E-13
sp\|P49073\|HYP2_AGABI	Hydrophobin-2 OS=Agaricus bisporus GN=hypC PE=3 SV=2	1	118	6.0E-12
sp\|P52748\|HYP1_PISTI	Hydrophobin-1 OS=Pisolithus tinctorius GN=HYD-1 PE=2 SV=1	20	117	1.0E-11
sp\|P16934\|SC4_SCHCO	Fruiting body protein SC4 OS=Schizophyllum commune GN=SC4 PE=2 SV=1	41	116	1.0E-08
sp\|P52749\|HYP2_PISTI	Hydrophobin-2 (Fragment) OS=Pisolithus tinctorius GN=HYD-2 PE=2 SV=1	41	117	6.0E-08

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GO

GO Term	Description	Terminal node
GO:0005199	structural constituent of cell wall	Yes
GO:0009277	fungal-type cell wall	Yes
GO:0005198	structural molecule activity	No
GO:0030312	external encapsulating structure	No
GO:0005618	cell wall	No
GO:0110165	cellular anatomical entity	No
GO:0003674	molecular_function	No
GO:0005575	cellular_component	No

Deeploc

Deeploc data not available for this genome

SignalP

SignalP signal predicted	Location	Score
Yes	1 - 22	0.976379

Transmembrane Domains

Domain #	Start	End	Length
1	2	24	22
2	56	78	22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	60
Change Orthofinder run

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39\|370700
Agaricus bisporus var bisporus H39	AgabiH39\|089270
Agaricus bisporus var bisporus H39	AgabiH39\|089730
Agaricus bisporus var bisporus H39	AgabiH39\|370000
Agaricus bisporus var bisporus H39	AgabiH39\|371300
Agaricus bisporus var bisporus H39	AgabiH39\|371000
Agaricus bisporus var bisporus H97	AgabiH97\|089650
Agaricus bisporus var bisporus H97	AgabiH97\|089610
Agaricus bisporus var bisporus H97	AgabiH97\|089540
Agaricus bisporus var bisporus H97	AgabiH97\|089270
Agaricus bisporus var bisporus H97	AgabiH97\|089730
Agaricus bisporus var bisporus H97	AgabiH97\|089680
Agaricus bisporus var burnettii H119p4	Agabi119p4\|658150
Agaricus bisporus var burnettii H119p4	Agabi119p4\|657850 (this protein)
Agaricus bisporus var burnettii H119p4	Agabi119p4\|657800
Agaricus bisporus var burnettii H119p4	Agabi119p4\|657600
Agaricus bisporus var burnettii H119p4	Agabi119p4\|089730

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4\|657850 MFARISTIITILFFAMLAAATAVPRTDPPPATGSQCTAVGGDVNCCNSLQEASNPIVGLLAGLLGIVLGPIQGLV GLTCNPISIIGGGNSCSSQTVCCTGNNFSGLLVIGCSPINIDL*
Coding	>Agabi119p4\|657850 ATGTTCGCTCGTATCTCTACCATCATCACCATCTTGTTCTTCGCCATGCTCGCTGCAGCCACTGCTGTCCCCCGC ACTGACCCGCCCCCCGCTACGGGCTCCCAGTGCACTGCCGTTGGCGGCGATGTCAACTGCTGCAACTCTCTCCAA GAGGCCAGCAACCCCATCGTCGGACTCCTCGCTGGCCTTCTCGGCATTGTCTTGGGCCCTATCCAAGGCCTCGTT GGTCTCACTTGCAACCCCATCAGCATTATTGGTGGCGGCAATTCTTGCTCCTCACAAACGGTCTGCTGCACCGGA AACAACTTCAGCGGCCTTCTCGTCATTGGCTGCAGCCCCATTAACATTGATCTCTAA
Transcript	>Agabi119p4\|657850 ATGTTCGCTCGTATCTCTACCATCATCACCATCTTGTTCTTCGCCATGCTCGCTGCAGCCACTGCTGTCCCCCGC ACTGACCCGCCCCCCGCTACGGGCTCCCAGTGCACTGCCGTTGGCGGCGATGTCAACTGCTGCAACTCTCTCCAA GAGGCCAGCAACCCCATCGTCGGACTCCTCGCTGGCCTTCTCGGCATTGTCTTGGGCCCTATCCAAGGCCTCGTT GGTCTCACTTGCAACCCCATCAGCATTATTGGTGGCGGCAATTCTTGCTCCTCACAAACGGTCTGCTGCACCGGA AACAACTTCAGCGGCCTTCTCGTCATTGGCTGCAGCCCCATTAACATTGATCTCTAA
Gene	>Agabi119p4\|657850 ATGTTCGCTCGTATCTCTACCATCATCACCATCTTGTTCTTCGCCATGCTCGCTGCAGCCACTGCTGTCCCCCGC ACTGACCCGCCCCCCGCTACGGGCTCCCAGTGCACTGCCGTTGGCGGCGATGTCAACTGCTGTAAGTATATCCCT GAGATATCCTCGAACATCTTCTCATCTGCTCGCTAGGCAACTCTCTCCAAGAGGCCAGCAACCCCATCGTCGGAC TCCTCGCTGGCCTTCTCGGCATTGTCTTGGGCCCTATCCAAGGCCTCGTTGGTCTCACTTGCAACCCCATCAGCA TTATTGGTGGCGGCAATTCTTGGTTCGTACTCTCGACCATCGAGTATTTTGAAATACAACTGACGAACGTGTTTA TAGCTCCTCACAAACGGTCTGCTGCACCGGAAACAACTTCAGCGGCCTTCTCGTCATTGGCTGCAGCCCCATTAA CATTGATCTCTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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