Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|648850
Gene name
Locationscaffold_05b:131794..133416
Strand+
Gene length (bp)1622
Transcript length (bp)1317
Coding sequence length (bp)1317
Protein length (aa) 439

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01926 MMR_HSR1 50S ribosome-binding GTPase 1.4E-10 139 241

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005525 GTP binding Yes
GO:0036094 small molecule binding No
GO:0097159 organic cyclic compound binding No
GO:0017076 purine nucleotide binding No
GO:1901265 nucleoside phosphate binding No
GO:0097367 carbohydrate derivative binding No
GO:0005488 binding No
GO:0043168 anion binding No
GO:0000166 nucleotide binding No
GO:0032553 ribonucleotide binding No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:0003674 molecular_function No
GO:0032561 guanyl ribonucleotide binding No
GO:0043167 ion binding No
GO:0032555 purine ribonucleotide binding No
GO:1901363 heterocyclic compound binding No
GO:0019001 guanyl nucleotide binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|648850
MVCSPAIAPGSLFVLCILTKTMADLANYSTTSLQSQESENCSFHTAYSWFPSLDTPTATNSPGSERTFSFLRRRI
GSSSSLAGSYHYGPPSKSCEASNSNVYMTPAMAQRSITSMDTASLGFESQEDFQSLIKGSPRIIAVMGPTGAGKS
TFIKAATGADDVEVGHKLGSCTEEVRAVPCRHPSKDEDIVLVDTPGFDDTYKSDAEILEQIAKWLADTYKAGVKL
SGILYLHRITDNRITNTVVRNLDMFHKLCGSENLSSITLVTTNWDSFRAENIQEGKANEEQLSELYWKCLLANGS
KMLRFENTCSSAWNIIDSVPEIPISLNIQKEIVEEGKSLPDTAAGRSLTSWLQRASDILKSMIQRLENLLKGVVN
ASEHDNAKAKRYEQNLREATEGLQGVHTMERRLSRSGSIKSTFARKFKTRKRTTLNIDQLGNR*
Coding >Agabi119p4|648850
ATGGTTTGCTCTCCTGCCATCGCCCCAGGCTCGTTGTTCGTGCTCTGCATCCTCACTAAGACGATGGCCGATTTA
GCCAACTATTCTACTACGTCTCTGCAGTCTCAGGAATCCGAAAATTGCAGTTTCCACACAGCATACTCTTGGTTC
CCCAGCCTGGACACACCCACAGCAACCAACAGTCCGGGATCCGAGAGGACATTCAGCTTTTTGAGAAGACGCATA
GGTAGTTCGAGCAGTTTGGCTGGTTCTTATCATTATGGCCCACCTTCGAAGTCTTGTGAAGCCAGTAACTCCAAC
GTTTACATGACGCCCGCTATGGCTCAAAGGAGCATAACTTCAATGGACACTGCCAGCTTAGGATTCGAGAGCCAA
GAAGATTTCCAAAGCCTCATCAAAGGTTCTCCAAGAATCATCGCGGTAATGGGTCCTACTGGCGCGGGAAAGAGC
ACTTTCATAAAAGCAGCAACAGGAGCGGACGACGTCGAGGTTGGCCACAAACTAGGCTCTTGTACAGAAGAAGTA
CGCGCTGTTCCATGTCGCCATCCTTCCAAAGACGAGGATATTGTCCTCGTTGACACGCCCGGCTTCGATGACACT
TACAAGAGCGATGCCGAAATTCTGGAACAAATAGCAAAGTGGTTGGCAGACACGTACAAGGCCGGTGTCAAGCTG
TCGGGGATCCTCTATCTCCATCGTATCACGGATAATCGCATAACGAATACGGTTGTGCGGAATTTGGACATGTTT
CACAAGCTCTGTGGATCAGAGAACCTCTCTTCCATCACTCTTGTGACGACCAATTGGGATTCCTTTCGAGCCGAG
AATATTCAGGAGGGTAAAGCTAACGAAGAACAACTCTCTGAGCTGTACTGGAAGTGCCTCCTCGCTAATGGCTCA
AAGATGTTGCGATTCGAAAACACGTGTTCTTCGGCTTGGAACATCATAGATTCAGTCCCCGAAATTCCGATATCG
CTCAACATCCAAAAAGAGATAGTTGAGGAGGGTAAAAGTCTTCCTGACACAGCAGCCGGTCGCTCTTTGACGTCT
TGGCTTCAAAGGGCCAGCGATATTTTAAAGAGTATGATACAGCGACTCGAAAATCTTTTGAAAGGCGTTGTAAAT
GCTTCGGAACATGACAATGCAAAGGCCAAGCGATACGAGCAAAATTTGCGGGAGGCTACTGAAGGTTTGCAGGGG
GTTCACACAATGGAACGGCGACTTTCTCGCAGTGGATCAATCAAGAGCACGTTTGCTCGGAAATTCAAAACCAGA
AAGAGAACAACACTTAACATTGACCAGCTTGGTAATCGCTGA
Transcript >Agabi119p4|648850
ATGGTTTGCTCTCCTGCCATCGCCCCAGGCTCGTTGTTCGTGCTCTGCATCCTCACTAAGACGATGGCCGATTTA
GCCAACTATTCTACTACGTCTCTGCAGTCTCAGGAATCCGAAAATTGCAGTTTCCACACAGCATACTCTTGGTTC
CCCAGCCTGGACACACCCACAGCAACCAACAGTCCGGGATCCGAGAGGACATTCAGCTTTTTGAGAAGACGCATA
GGTAGTTCGAGCAGTTTGGCTGGTTCTTATCATTATGGCCCACCTTCGAAGTCTTGTGAAGCCAGTAACTCCAAC
GTTTACATGACGCCCGCTATGGCTCAAAGGAGCATAACTTCAATGGACACTGCCAGCTTAGGATTCGAGAGCCAA
GAAGATTTCCAAAGCCTCATCAAAGGTTCTCCAAGAATCATCGCGGTAATGGGTCCTACTGGCGCGGGAAAGAGC
ACTTTCATAAAAGCAGCAACAGGAGCGGACGACGTCGAGGTTGGCCACAAACTAGGCTCTTGTACAGAAGAAGTA
CGCGCTGTTCCATGTCGCCATCCTTCCAAAGACGAGGATATTGTCCTCGTTGACACGCCCGGCTTCGATGACACT
TACAAGAGCGATGCCGAAATTCTGGAACAAATAGCAAAGTGGTTGGCAGACACGTACAAGGCCGGTGTCAAGCTG
TCGGGGATCCTCTATCTCCATCGTATCACGGATAATCGCATAACGAATACGGTTGTGCGGAATTTGGACATGTTT
CACAAGCTCTGTGGATCAGAGAACCTCTCTTCCATCACTCTTGTGACGACCAATTGGGATTCCTTTCGAGCCGAG
AATATTCAGGAGGGTAAAGCTAACGAAGAACAACTCTCTGAGCTGTACTGGAAGTGCCTCCTCGCTAATGGCTCA
AAGATGTTGCGATTCGAAAACACGTGTTCTTCGGCTTGGAACATCATAGATTCAGTCCCCGAAATTCCGATATCG
CTCAACATCCAAAAAGAGATAGTTGAGGAGGGTAAAAGTCTTCCTGACACAGCAGCCGGTCGCTCTTTGACGTCT
TGGCTTCAAAGGGCCAGCGATATTTTAAAGAGTATGATACAGCGACTCGAAAATCTTTTGAAAGGCGTTGTAAAT
GCTTCGGAACATGACAATGCAAAGGCCAAGCGATACGAGCAAAATTTGCGGGAGGCTACTGAAGGTTTGCAGGGG
GTTCACACAATGGAACGGCGACTTTCTCGCAGTGGATCAATCAAGAGCACGTTTGCTCGGAAATTCAAAACCAGA
AAGAGAACAACACTTAACATTGACCAGCTTGGTAATCGCTGA
Gene >Agabi119p4|648850
ATGGTTTGCTCTCCTGCCATCGCCCCAGGCTCGTTGTTCGTGCTCTGCATCCTCACTAAGTGTGCTCAAACCTTA
GAGCATGTTCCTGAACTAATTGGAAAATCTAGGACGATGGCCGATTTAGCCAACTATTCTACTACGTCTCTGCAG
TCTCAGGAATCCGAAAATTGCAGTTTCCACACAGCATACTCTTGGTTCCCCAGCCTGGACACACCCACAGCAACC
AACAGTCCGGGATCCGAGAGGACATTCAGCTTTTTGAGAAGACGCATAGGTAGTTCGAGCAGTTTGGCTGGTTCT
TATCATTATGGCCCACCTTCGAAGTCTTGTGAAGCCAGTAACTCCAACGTTTACATGACGCCCGCTATGGCTCAA
AGGAGCATAACTTCAATGGACACTGCCAGCTTAGGATTCGAGAGCCAAGAAGATTTCCAAAGCCTCATCAAAGGT
TCTCCAAGAATCATCGCGTAAGTGCTTGAATAACTTCCTACACGAATAAACTCTGACTTCAATCTGACAGGGTAA
TGGGTCCTACTGGCGCGGGAAAGAGCACTGTAAGCTATATCTAGTCTACTTGGGTTTACCGGCTCAACCTCGTCA
GTTCATAAAAGCAGCAACAGGAGCGGACGACGTCGAGGTTGGCCACAAACTAGGCTCTTGTACAGAAGAAGTACG
CGCTGTTCCATGTCGCCATCCTTCCAAAGACGAGGATATTGTCCTCGTTGACACGCCCGGCTTCGATGACACTTA
CAAGAGCGATGCCGAAATTCTGGAACAAATAGCAAAGTGGTTGGCAGACACGTTTGAGTGACCTTTTTGTCTTGT
ATTCGCGAACTGATCTGGACATCAAGGTACAAGGCCGGTGTCAAGCTGTCGGGGATCCTCTATCTCCATCGTATC
ACGGATAATCGCATAACGAATACGGTTGTGCGGAATTTGGACATGTTTCACAAGCTCTGTGGATCAGAGAACCTC
TCTTCCATCACTCTTGTGACGACCAATTGGGATTCCTTTCGAGCCGAGAATATTCAGGAGGGTAAAGCTAACGAA
GAACAACTCTCTGAGCTGTACTGGAAGTGCCTCCTCGCTAATGGCTCAAAGATGTTGCGATTCGAAAACACGTGT
TCTTCGGCTTGGAACATCATAGATTCAGTCCCCGAAATTCCGATATCGCTCAACATCCAAAAAGAGATAGTTGAG
GAGGGTAAAAGTCTTCCTGACACAGCAGCCGGTCGCTCTTTGACGTCTTGGCTTCAAAGGGCCAGCGATATTTTA
AAGAGTATGATACAGCGACTCGAAAATCTTTTGAAAGGCGTTGTAAATGCTTCGGAACATGACAATGCAAAGGCC
AAGCGATACGAGCAAAATTTGCGGGAGGCTACTGAAGGTTTGCAGGGGGTTCACACAATGGAACGGCGACTTTCT
CGCAGTGGATCAATCAAGAGCACGTTTGTATGTACTCTCCTGCTTCTACGATTTACGTGGTGAATTAACAAAAGA
ATAAAGGCTCGGAAATTCAAAACCAGAAAGGTAAGCACCCTTTCCCGTTCAACTTACCCATATATGATTAACATA
TCATCCAGAGAACAACACTTAACATTGACCAGCTTGGTAATCGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail