Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|648500
Gene name
Locationscaffold_05b:81361..82774
Strand-
Gene length (bp)1413
Transcript length (bp)954
Coding sequence length (bp)954
Protein length (aa) 318

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.5

Transmembrane Domains

Domain # Start End Length
1 36 58 22
2 71 93 22
3 123 145 22
4 166 188 22
5 192 211 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|648500
MTAWLVYALSYILLVGQQEGPEPAFGLCMLQTLLVYAAPSLASTSMVCYCIEFYLIIYGIRSGLPRQPRTLLSLV
LIIIPWLVFLAIVIEGLLLIFLAENPVQRAKNGFYCHLENNIPETVTAAIVLTNGAILLPLEVWTGIIMYQNWDI
FKRLDRADRQLVLTVYLRLLVCTLAALLALVFSMLAFVFPEADATSIVYPTIPFFLAFAFGTQKDVLRAWMFWKS
PEPYSSILYASCHMMTTNIYTSGDTVVDVSTDSEMQSIEQKKPSLADSMGQALSPTMSPRTKQDGNQGMSSRGTI
HVRLPTDETVANLTTES*
Coding >Agabi119p4|648500
ATGACGGCGTGGCTTGTTTACGCGTTGAGCTATATATTGCTGGTAGGGCAACAAGAAGGACCGGAACCTGCCTTC
GGGCTGTGCATGTTGCAGACACTACTGGTGTATGCTGCTCCTTCCTTGGCTTCGACGAGCATGGTTTGTTACTGC
ATCGAGTTTTATTTGATTATTTATGGGATTAGGTCTGGGCTCCCCAGACAGCCAAGAACTCTCTTAAGCCTCGTG
CTGATTATCATTCCATGGCTTGTCTTCTTGGCCATTGTTATCGAAGGGCTGCTGTTGATTTTTCTCGCTGAGAAT
CCCGTTCAGCGCGCCAAGAATGGTTTCTACTGCCATCTTGAGAATAATATCCCGGAAACGGTGACTGCAGCTATT
GTCTTAACCAACGGGGCGATCTTGTTGCCCTTGGAAGTTTGGACTGGTATTATCATGTACCAAAATTGGGACATA
TTCAAACGTCTGGATCGAGCAGATCGTCAACTCGTTCTCACCGTTTACCTGCGCCTACTAGTTTGTACTCTCGCT
GCTTTATTGGCTTTGGTGTTTTCAATGCTAGCCTTTGTTTTCCCTGAGGCAGATGCTACAAGCATAGTTTACCCC
ACTATTCCCTTTTTCCTTGCCTTTGCGTTTGGGACACAAAAGGATGTTCTTCGTGCTTGGATGTTCTGGAAATCG
CCTGAGCCATACAGCTCGATACTTTACGCTAGCTGCCATATGATGACGACCAACATTTACACTTCTGGAGATACC
GTTGTTGATGTATCGACAGATTCAGAGATGCAGTCGATCGAGCAAAAAAAACCTTCTCTTGCTGATTCGATGGGC
CAGGCGTTATCGCCAACGATGTCTCCACGGACGAAACAGGATGGTAATCAAGGAATGTCATCTCGTGGAACGATC
CACGTCCGCCTCCCGACGGACGAAACAGTGGCCAACCTCACCACCGAGAGCTGA
Transcript >Agabi119p4|648500
ATGACGGCGTGGCTTGTTTACGCGTTGAGCTATATATTGCTGGTAGGGCAACAAGAAGGACCGGAACCTGCCTTC
GGGCTGTGCATGTTGCAGACACTACTGGTGTATGCTGCTCCTTCCTTGGCTTCGACGAGCATGGTTTGTTACTGC
ATCGAGTTTTATTTGATTATTTATGGGATTAGGTCTGGGCTCCCCAGACAGCCAAGAACTCTCTTAAGCCTCGTG
CTGATTATCATTCCATGGCTTGTCTTCTTGGCCATTGTTATCGAAGGGCTGCTGTTGATTTTTCTCGCTGAGAAT
CCCGTTCAGCGCGCCAAGAATGGTTTCTACTGCCATCTTGAGAATAATATCCCGGAAACGGTGACTGCAGCTATT
GTCTTAACCAACGGGGCGATCTTGTTGCCCTTGGAAGTTTGGACTGGTATTATCATGTACCAAAATTGGGACATA
TTCAAACGTCTGGATCGAGCAGATCGTCAACTCGTTCTCACCGTTTACCTGCGCCTACTAGTTTGTACTCTCGCT
GCTTTATTGGCTTTGGTGTTTTCAATGCTAGCCTTTGTTTTCCCTGAGGCAGATGCTACAAGCATAGTTTACCCC
ACTATTCCCTTTTTCCTTGCCTTTGCGTTTGGGACACAAAAGGATGTTCTTCGTGCTTGGATGTTCTGGAAATCG
CCTGAGCCATACAGCTCGATACTTTACGCTAGCTGCCATATGATGACGACCAACATTTACACTTCTGGAGATACC
GTTGTTGATGTATCGACAGATTCAGAGATGCAGTCGATCGAGCAAAAAAAACCTTCTCTTGCTGATTCGATGGGC
CAGGCGTTATCGCCAACGATGTCTCCACGGACGAAACAGGATGGTAATCAAGGAATGTCATCTCGTGGAACGATC
CACGTCCGCCTCCCGACGGACGAAACAGTGGCCAACCTCACCACCGAGAGCTGA
Gene >Agabi119p4|648500
ATGACGGCGTGGCTTGTTTACGCGTTGAGCTATATATTGCTGGTAGGGCAACAAGAAGGACCGGAACCTGCCTTC
GGGCTGTGCATGTTGCAGACACTACTGGTGTATGCTGCTCCTTCCTTGTGAGTTTACTTTCAATCATTCCAGCCA
AAGCTCACGTTGTTATGAGGGCTTCGACGAGCATGGTTTGTTACTGCATCGAGGTGTGTCGATCTATCTCTGTCA
TGCTCCTCGCTGATGCCCGGTAGTTTTATTTGATTATTTATGGGATTAGGTCTGGGCTCCCCAGACAGCCAAGAA
CTCTCTTAAGCCTCGTGGTCAGTCGAGTAGTAAGACCGAGCGTAAAATTCACTGAATTTGGGATAGCTGATTATC
ATTCCATGGCTTGTCTTCTTGGCCATTGTTATCGAAGGGCTGCTGGTACGGCTGCTCTTGATGATTGTTACGATT
TGCTGATGAAAATAGTTGATTTTTCTCGCTGAGAATCCCGTTCAGCGCGCCAAGAATGGTTTCTACTGCCATCTT
GAGAATAATATCCCGTCAGTCCAACGAATGCCCCAATGTTTAGGAGGAGTTTGTTCACTCTCAACCAGGGAAACG
GTGACTGCAGCTATTGTCTTAACCAACGGGGCGATCTTGTTGCCCTTGGAAGGTATGTTGCTGTCCTATATTAAA
GACTGTGTCATTGAAACGCTTCTTCTTTTCTCAGTTTGGACTGGTATTATCATGTACCAAAATTGGGACATATTC
AAACGTCTGGATCGAGCAGATCGTCAACTCGTTCTCACCGTTTACCTGCGCCTACTAGTTTGTACTCTCGCTGCT
TTATTGGCTTTGGTGTGCGTAAAAAATCAATCCAAAGGCTCAACTTAGATGACACTCCTATCAGGTTTTCAATGC
TAGCCTTTGTTTTCCCTGAGGCAGATGCTACAAGCATAGTTTACCCCACTAGTAGGTCACGAATCTAAATTTCTC
AAGCGTCATTAGTAATACTGAACCGGGAGTAGTTCCCTTTTTCCTTGCCTTTGCGTTTGGGACACAAAAGGTAAA
TCGCTTGAATTATAGCTAAGTAGCTCGGACTCAGGCTGATGAGATTGACAGGATGTTCTTCGTGCTTGGATGTTC
TGGAAATCGCCTGAGCCATACAGCTCGATACTTTACGCTAGCTGCCATATGATGACGACCAACATTTACACTTCT
GGAGATACCGTTGTTGATGTATCGACAGATTCAGAGATGCAGTCGATCGAGCAAAAAAAACCTTCTCTTGCTGAT
TCGATGGGCCAGGCGTTATCGCCAACGATGTCTCCACGGACGAAACAGGATGGTAATCAAGGAATGTCATCTCGT
GGAACGATCCACGTCCGCCTCCCGACGGACGAAACAGTGGCCAACCTCACCACCGAGAGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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