Fungal Genomics

General Properties

Protein ID	Agabi119p4|643850
Gene name
Location	scaffold_05a:1043295..1044332
Strand	+
Gene length (bp)	1037
Transcript length (bp)	936
Coding sequence length (bp)	936
Protein length (aa)	312

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF14223	Retrotran_gag_2	gag-polypeptide of LTR copia-type	3.2E-11	42	180

Swissprot hits

(None)

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	724
Change Orthofinder run	5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var burnettii H119p4	Agabi119p4|566750
Agaricus bisporus var burnettii H119p4	Agabi119p4|604750
Agaricus bisporus var burnettii H119p4	Agabi119p4|643850 (this protein)
Agaricus bisporus var burnettii H119p4	Agabi119p4|718100

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|643850 MASGSPTFVKLNEENYSTWQKAPSTSSPVTQAEADALDAFEARLDKAAGWLYLMVEQEQRIHFQGIQDSPVKMWE ALEAVHRQKRAGMRFNAYDDLFSIRKLEESLQSLINRVESSKRKIKELRPSSFTLEQLDDELASMALIRALPDEF SGFTSSLLLMDKLDKTTVHQAFVTEDLQRRKRAQDASGSSQALAACSGSQFATKTCDFCGREGHKFTECKTFERA KSRAQEDAQKPRTPYKRANKAQEESGSSSSTQTPEKAQRVTEFAGNASTPYPSPSPSPSTPLQLDADFHWLADTG ATSHMTPHRHC*
Coding	>Agabi119p4|643850 ATGGCCTCCGGATCGCCCACCTTCGTGAAACTCAACGAGGAGAACTACTCCACATGGCAGAAGGCTCCCTCAACC TCTAGCCCTGTTACCCAGGCCGAAGCGGACGCTCTGGACGCGTTTGAGGCTCGCTTGGACAAGGCTGCAGGCTGG CTATACCTCATGGTGGAACAGGAGCAGAGAATTCACTTCCAGGGCATCCAGGACAGTCCTGTGAAGATGTGGGAG GCTCTAGAGGCTGTACATCGACAGAAGAGGGCTGGAATGCGTTTCAATGCCTATGATGACCTCTTCTCCATCCGA AAACTCGAGGAGTCCCTCCAATCCCTTATCAACAGAGTAGAGAGCTCTAAACGAAAAATCAAGGAGCTCAGACCC TCCTCCTTCACTCTAGAGCAGCTAGATGATGAGCTAGCCTCTATGGCTCTCATCAGAGCGCTCCCGGACGAGTTT TCCGGCTTCACATCGTCTCTATTGCTTATGGATAAGCTGGACAAGACTACAGTCCATCAGGCCTTTGTCACTGAG GACTTACAACGTCGAAAACGCGCTCAGGACGCCTCTGGGAGCTCCCAGGCTCTTGCAGCTTGCTCTGGCTCCCAA TTTGCGACAAAAACCTGCGATTTCTGCGGGAGAGAGGGCCACAAGTTCACTGAATGCAAAACCTTCGAGAGAGCG AAGTCCCGGGCACAGGAGGACGCACAAAAGCCTAGAACTCCGTACAAGAGGGCTAACAAGGCTCAGGAAGAGTCT GGGAGCTCTAGCTCGACTCAGACTCCCGAAAAAGCGCAGAGAGTCACCGAGTTTGCTGGCAATGCAAGTACTCCT TATCCCTCACCTTCTCCCTCGCCTTCTACACCTCTCCAGCTCGATGCTGACTTCCACTGGCTTGCAGATACAGGG GCCACTTCTCATATGACCCCTCACCGGCACTGCTGA
Transcript	>Agabi119p4|643850 ATGGCCTCCGGATCGCCCACCTTCGTGAAACTCAACGAGGAGAACTACTCCACATGGCAGAAGGCTCCCTCAACC TCTAGCCCTGTTACCCAGGCCGAAGCGGACGCTCTGGACGCGTTTGAGGCTCGCTTGGACAAGGCTGCAGGCTGG CTATACCTCATGGTGGAACAGGAGCAGAGAATTCACTTCCAGGGCATCCAGGACAGTCCTGTGAAGATGTGGGAG GCTCTAGAGGCTGTACATCGACAGAAGAGGGCTGGAATGCGTTTCAATGCCTATGATGACCTCTTCTCCATCCGA AAACTCGAGGAGTCCCTCCAATCCCTTATCAACAGAGTAGAGAGCTCTAAACGAAAAATCAAGGAGCTCAGACCC TCCTCCTTCACTCTAGAGCAGCTAGATGATGAGCTAGCCTCTATGGCTCTCATCAGAGCGCTCCCGGACGAGTTT TCCGGCTTCACATCGTCTCTATTGCTTATGGATAAGCTGGACAAGACTACAGTCCATCAGGCCTTTGTCACTGAG GACTTACAACGTCGAAAACGCGCTCAGGACGCCTCTGGGAGCTCCCAGGCTCTTGCAGCTTGCTCTGGCTCCCAA TTTGCGACAAAAACCTGCGATTTCTGCGGGAGAGAGGGCCACAAGTTCACTGAATGCAAAACCTTCGAGAGAGCG AAGTCCCGGGCACAGGAGGACGCACAAAAGCCTAGAACTCCGTACAAGAGGGCTAACAAGGCTCAGGAAGAGTCT GGGAGCTCTAGCTCGACTCAGACTCCCGAAAAAGCGCAGAGAGTCACCGAGTTTGCTGGCAATGCAAGTACTCCT TATCCCTCACCTTCTCCCTCGCCTTCTACACCTCTCCAGCTCGATGCTGACTTCCACTGGCTTGCAGATACAGGG GCCACTTCTCATATGACCCCTCACCGGCACTGCTGA
Gene	>Agabi119p4|643850 ATGGCCTCCGGATCGCCCACCTTCGTGAAACTCAACGAGGAGAACTACTCCACATGGTCTGGAGAGATGGAGGCG TGGCTGAGAGCCTCTGGGCTCTAGAGACTTGTCTCAGGCAGGCAGAAGGCTCCCTCAACCTCTAGCCCTGTTACC CAGGCCGAAGCGGACGCTCTGGACGCGTTTGAGGCTCGCTTGGACAAGGCTGCAGGCTGGCTATACCTCATGGTG GAACAGGAGCAGAGAATTCACTTCCAGGGCATCCAGGACAGTCCTGTGAAGATGTGGGAGGCTCTAGAGGCTGTA CATCGACAGAAGAGGGCTGGAATGCGTTTCAATGCCTATGATGACCTCTTCTCCATCCGAAAACTCGAGGAGTCC CTCCAATCCCTTATCAACAGAGTAGAGAGCTCTAAACGAAAAATCAAGGAGCTCAGACCCTCCTCCTTCACTCTA GAGCAGCTAGATGATGAGCTAGCCTCTATGGCTCTCATCAGAGCGCTCCCGGACGAGTTTTCCGGCTTCACATCG TCTCTATTGCTTATGGATAAGCTGGACAAGACTACAGTCCATCAGGCCTTTGTCACTGAGGACTTACAACGTCGA AAACGCGCTCAGGACGCCTCTGGGAGCTCCCAGGCTCTTGCAGCTTGCTCTGGCTCCCAATTTGCGACAAAAACC TGCGATTTCTGCGGGAGAGAGGGCCACAAGTTCACTGAATGCAAAACCTTCGAGAGAGCGAAGTCCCGGGCACAG GAGGACGCACAAAAGCCTAGAACTCCGTACAAGAGGGCTAACAAGGCTCAGGAAGAGTCTGGGAGCTCTAGCTCG ACTCAGACTCCCGAAAAAGCGCAGAGAGTCACCGAGTTTGCTGGCAATGCAAGTACTCCTTATCCCTCACCTTCT CCCTCGCCTTCTACACCTCTCCAGCTCGATGCTGACTTCCACTGGCTTGCAGATACAGGGGCCACTTCTCATATG ACCCCTCACCGGCACTGGTTCAAGTCATATACCAGTCACAAAATCCCCATCCGACTAGCTGA