© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|641300 |
| Gene name | |
| Location | scaffold_05a:887956..889552 |
| Strand | + |
| Gene length (bp) | 1596 |
| Transcript length (bp) | 1212 |
| Coding sequence length (bp) | 1212 |
| Protein length (aa) | 404 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 26 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 101 | 123 | 22 |
| 2 | 143 | 165 | 22 |
| 3 | 175 | 197 | 22 |
| 4 | 206 | 228 | 22 |
| 5 | 252 | 274 | 22 |
| 6 | 295 | 312 | 17 |
| 7 | 327 | 349 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|641300 MPFKLRNTAIWHLFLIEKLLPSLTGDQRFPPAVWVIAMSIRTDSPTVVLRATLTHHASASIPGPVSSHPTSCGAA PSPSMSTAVIPLPPGLTLDQFQDLQSHLIRIAITASVAFGVIIWDYFVQLPSEIALYKSHDKNVWKTPVTWWFII LRYSGIIASLPSLFFTAAETRSCQVAISASAVGAVLTVASSGAIFWYRIRALWSSSLIVSVIAGFFYLLMLGCWI SVATQYRGDTGPDVPFLSNCQLHPVAPWAPISFASSVAYDTCVLLLTLARFRGNNGPSKSKIGRQVYNDNLLYFV LITATNIVVLCIQAQRDPKFDLIKPAAVPFATIMTVAMGTRVFLNLRLYHQRQQNHSANASLPLHSSSLASDPAR RPMMFNSGSGKSSDEPCNQSSKVSTIAL* |
| Coding | >Agabi119p4|641300 ATGCCCTTCAAGCTCCGAAACACGGCCATCTGGCATCTCTTTCTCATTGAGAAGCTTCTGCCAAGCCTGACCGGG GACCAGCGGTTCCCTCCAGCAGTTTGGGTCATTGCTATGTCTATTAGGACGGATAGTCCAACGGTAGTGCTGCGC GCAACTCTAACTCACCACGCATCTGCATCAATCCCGGGCCCTGTTTCGTCTCATCCTACGTCCTGCGGAGCTGCG CCATCCCCCAGCATGAGCACGGCAGTGATTCCTCTACCTCCTGGTCTAACATTGGACCAATTTCAGGACCTTCAA TCCCACTTGATTAGGATCGCCATAACAGCCTCGGTCGCTTTCGGCGTTATTATATGGGACTATTTCGTGCAGTTG CCCAGCGAAATTGCCCTATATAAATCTCACGACAAAAATGTGTGGAAGACTCCCGTAACATGGTGGTTTATCATC CTTCGTTACTCTGGGATCATTGCATCACTGCCGTCCCTCTTCTTCACCGCTGCAGAGACACGCTCTTGTCAGGTC GCCATATCTGCTAGTGCCGTGGGTGCGGTGCTCACTGTCGCATCATCTGGAGCTATATTTTGGTATCGTATCCGA GCGTTATGGAGTAGCTCCTTGATCGTTAGCGTCATCGCCGGTTTCTTTTACCTCCTTATGCTTGGCTGTTGGATT TCCGTTGCAACCCAATACAGAGGCGACACTGGGCCCGATGTTCCTTTTCTGTCCAACTGCCAGCTCCACCCCGTT GCCCCATGGGCGCCCATAAGCTTTGCTTCATCCGTAGCTTATGATACTTGCGTCCTCTTGCTCACTCTTGCTCGA TTTCGCGGCAACAATGGTCCAAGCAAGTCAAAGATCGGGAGGCAGGTCTACAACGACAACTTGTTATATTTCGTC CTCATAACTGCCACCAACATCGTCGTGCTTTGCATCCAAGCACAAAGGGATCCAAAATTTGATCTTATTAAACCC GCAGCGGTGCCTTTCGCCACTATCATGACTGTCGCAATGGGTACCCGGGTTTTCCTCAATCTTAGATTATACCAT CAGCGTCAACAGAACCATTCTGCGAACGCATCACTCCCTCTTCACTCCAGCAGTCTCGCATCTGATCCCGCACGT CGGCCTATGATGTTCAACAGTGGCAGTGGGAAATCGTCGGATGAACCTTGCAATCAAAGTAGCAAGGTTTCGACG ATTGCGTTGTGA |
| Transcript | >Agabi119p4|641300 ATGCCCTTCAAGCTCCGAAACACGGCCATCTGGCATCTCTTTCTCATTGAGAAGCTTCTGCCAAGCCTGACCGGG GACCAGCGGTTCCCTCCAGCAGTTTGGGTCATTGCTATGTCTATTAGGACGGATAGTCCAACGGTAGTGCTGCGC GCAACTCTAACTCACCACGCATCTGCATCAATCCCGGGCCCTGTTTCGTCTCATCCTACGTCCTGCGGAGCTGCG CCATCCCCCAGCATGAGCACGGCAGTGATTCCTCTACCTCCTGGTCTAACATTGGACCAATTTCAGGACCTTCAA TCCCACTTGATTAGGATCGCCATAACAGCCTCGGTCGCTTTCGGCGTTATTATATGGGACTATTTCGTGCAGTTG CCCAGCGAAATTGCCCTATATAAATCTCACGACAAAAATGTGTGGAAGACTCCCGTAACATGGTGGTTTATCATC CTTCGTTACTCTGGGATCATTGCATCACTGCCGTCCCTCTTCTTCACCGCTGCAGAGACACGCTCTTGTCAGGTC GCCATATCTGCTAGTGCCGTGGGTGCGGTGCTCACTGTCGCATCATCTGGAGCTATATTTTGGTATCGTATCCGA GCGTTATGGAGTAGCTCCTTGATCGTTAGCGTCATCGCCGGTTTCTTTTACCTCCTTATGCTTGGCTGTTGGATT TCCGTTGCAACCCAATACAGAGGCGACACTGGGCCCGATGTTCCTTTTCTGTCCAACTGCCAGCTCCACCCCGTT GCCCCATGGGCGCCCATAAGCTTTGCTTCATCCGTAGCTTATGATACTTGCGTCCTCTTGCTCACTCTTGCTCGA TTTCGCGGCAACAATGGTCCAAGCAAGTCAAAGATCGGGAGGCAGGTCTACAACGACAACTTGTTATATTTCGTC CTCATAACTGCCACCAACATCGTCGTGCTTTGCATCCAAGCACAAAGGGATCCAAAATTTGATCTTATTAAACCC GCAGCGGTGCCTTTCGCCACTATCATGACTGTCGCAATGGGTACCCGGGTTTTCCTCAATCTTAGATTATACCAT CAGCGTCAACAGAACCATTCTGCGAACGCATCACTCCCTCTTCACTCCAGCAGTCTCGCATCTGATCCCGCACGT CGGCCTATGATGTTCAACAGTGGCAGTGGGAAATCGTCGGATGAACCTTGCAATCAAAGTAGCAAGGTTTCGACG ATTGCGTTGTGA |
| Gene | >Agabi119p4|641300 ATGCCCTTCAAGCTCCGAAACACGGCCATCTGGCATCTCTTTCTCATTGAGAAGCTTCTGCCAAGCCTGACCGGG GACCAGCGGTTCCCTCCAGCAGTTTGGGTCATTGCTATGGTAAATAGGCTATGTAGAAGGAAGGAGACTCGCCGT TGGCGGCTTTGACAATGTGGCTTGTAGTCTATTAGGACGGATAGTCCAACGGTAGTGCTGCGCGCAACTCTAGTA CGTTTATTCTCTTGATTCATTACATCGTTCGACTGATGTGCCCAAAACAGACTCACCACGCATCTGCATCAATCC CGGGCCCTGTTTCGTCTCATCCTGTGATCATATATAACCGATAAGCTCATCTACCATGCCTTATCCTTCAGACGT CCTGCGGAGCTGCGCCATCCCCCAGCATGAGCACGGCAGTGATTCCTCTACCTCCTGGTCTAACATTGGACCAAT TTCAGGACCTTCAATCCCACTTGAGTAAGCTAGATCTTTCTTTTCAACGGATTGGGCGGCTTAGAAGTCATTTCA TAGTTAGGATCGCCATAACAGCCTCGGTCGCTTTCGGCGTTATTATATGGGACTAGTAAGTAGTCTGTTCTCATG ATGTGGGAGATTTATTCAAGCCTTCTGCGGCCACTAGTTTCGTGCAGTTGCCCAGCGAAATTGCCCTATATAAAT CTCACGACAAAAATGTGTGGAAGACTCCCGTAACATGGTGGTGAGTATGTTCTACTATACTCAAAGACAGGCTTC TTAAAAATGGTTTCTGACGCAGGTTTATCATCCTTCGTTACTCTGGGATCATTGCATCACTGCCGTCCCTCTTCT TCACCGCTGCAGAGACACGCTCTTGTCAGGTCGCCATATCTGCTAGTGCCGTGGGTGCGGTGCTCACTGTCGCAT CATCTGGAGCTATATTTTGGTATCGTATCCGAGCGTTATGGAGTAGCTCCTTGATCGTTAGCGTCATCGCCGGTT TCTTTTACCTCCTTATGCTTGGCTGTTGGGTACGCAGTAATGATTTTCCAGATATTGGCCAGTCAATTAATGTCT TCTCAGATTTCCGTTGCAACCCAATACAGAGGCGACACTGGGCCCGATGTTCCTTTTCTGTCCAACTGCCAGCTC CACCCCGTTGCCCCATGGGCGCCCATAAGCTTTGCTTCATCCGTAGCTTATGATACTTGCGTCCTCTTGCTCACT CTTGCTCGATTTCGCGGCAACAATGGTCCAAGCAAGTCAAAGATCGGGAGGCAGGTCTACAACGACAACTTGTTA TATTTCGTCCTCATAACTGCCACCAACATCGTCGTGCTTTGCATCCAAGCACAAAGGGATCCAAAATTTGATCTT ATTAAACCCGCAGCGGTGCCTTTCGCCACTATCATGACTGTCGCAATGGGTACCCGGGTTTTCCTCAATCTTAGA TTATACCATCAGCGTCAACAGAACCATTCTGCGAACGCATCACTCCCTCTTCACTCCAGCAGTCTCGCATCTGAT CCCGCACGTCGGCCTATGATGTTCAACAGTGGCAGTGGGAAATCGTCGGATGAACCTTGCAATCAAAGTAGCAAG GTTTCGACGATTGCGTTGTGA |