Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|637100
Gene name
Locationscaffold_05a:406150..407686
Strand-
Gene length (bp)1536
Transcript length (bp)1536
Coding sequence length (bp)1536
Protein length (aa) 512

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 6.8E-13 36 162

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 57 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|637100
MVNGSDNSAWEMSGSPAPPLPTTDPVELRARALLSARASAIIESHLPNSMLSQAAAQTDARALWSWLEGQYGQKG
PTFAYERFVTAQNFKINDSADPSSAIADLYALFAAVESTGALIHESIRTMMLLNALPNRFEHVASNILAEKRSVA
DLKWEETRARIIAAWRNPHTVANAACFRQQNQPKPKWDNKKPDQGQGKSQGSGSGSGSSQNQNKQQQPQQKGEQQ
SEGNKKKRTRSRKKKQGNEASTASIKEVKDTTPDYSASSAIASMTRLASNSTRAKVDEMKSRFVPLPSRSDPNLT
RNRSPKLGNHTISGEEFLFFPDGNMIDLSPPDTDIDSWTLPRLRPAMRNLLSDESDVDLDPSDSGSIPRDPRKRP
SSRHSPTPYERAKTKVLSLWDQRLNAVTVTAPPIEDGAGQVGGNAPAVKMPATKGNKLRRWMSIRLMRFLSAMKM
ENLSMNTMRSANRIALRKSLAPLPYLRLTHGFYRAVLSPETKAWLNQPISEEDRAALRGFD*
Coding >Agabi119p4|637100
ATGGTCAACGGCTCGGATAATTCGGCTTGGGAGATGAGTGGTTCCCCCGCTCCTCCTCTGCCAACCACAGACCCG
GTCGAGTTACGAGCTCGTGCTCTGCTCTCAGCCCGAGCGTCTGCAATAATCGAGTCCCATCTCCCAAATTCGATG
CTCAGCCAGGCGGCCGCCCAAACGGACGCCAGAGCTCTTTGGAGTTGGTTAGAAGGCCAGTACGGCCAAAAAGGA
CCGACATTCGCTTACGAGCGATTTGTCACGGCTCAGAATTTCAAGATTAATGACTCCGCGGATCCATCGTCTGCG
ATTGCAGATCTCTACGCCCTATTCGCTGCTGTTGAAAGCACCGGTGCGTTGATCCACGAGTCGATCCGCACCATG
ATGCTCCTCAACGCTCTCCCCAACCGGTTCGAGCATGTCGCTTCGAACATTCTTGCTGAGAAAAGATCGGTCGCC
GATCTTAAATGGGAGGAAACCCGTGCCCGCATCATCGCCGCGTGGCGCAACCCCCATACAGTTGCCAATGCTGCG
TGTTTCCGCCAGCAAAACCAGCCTAAACCTAAATGGGACAACAAGAAACCCGATCAAGGTCAGGGTAAGTCCCAA
GGCTCTGGTTCTGGTTCTGGCTCCAGCCAGAACCAAAATAAGCAACAACAACCTCAGCAGAAAGGTGAGCAGCAG
AGTGAAGGCAACAAGAAGAAGAGAACCCGCTCCCGTAAAAAGAAGCAGGGTAATGAGGCTTCTACAGCCTCTATC
AAAGAAGTCAAGGACACCACTCCTGACTACTCCGCTTCTTCTGCCATCGCTTCGATGACGCGGCTCGCATCCAAC
TCTACTCGTGCGAAAGTTGATGAGATGAAGAGCAGGTTTGTCCCGCTACCATCTAGATCAGATCCAAATCTAACG
AGGAATAGATCGCCCAAGTTGGGCAACCATACTATTTCGGGTGAGGAATTTCTCTTCTTCCCTGATGGTAATATG
ATTGATCTTTCCCCTCCGGATACTGACATTGACTCTTGGACTTTGCCTCGGCTTCGTCCCGCAATGCGAAATCTC
CTTTCGGACGAATCTGATGTTGATCTTGATCCATCAGACTCCGGGTCGATCCCTCGGGACCCTCGGAAACGTCCT
TCCTCTCGCCATTCCCCCACGCCCTACGAAAGGGCCAAGACGAAAGTGTTATCCCTTTGGGATCAACGTCTTAAC
GCAGTGACTGTAACAGCCCCTCCAATCGAGGATGGGGCCGGTCAAGTGGGTGGTAATGCTCCGGCTGTAAAAATG
CCGGCTACGAAAGGAAACAAGTTGAGAAGATGGATGTCGATAAGGCTGATGAGATTTCTCTCGGCGATGAAGATG
GAGAATTTGAGTATGAATACGATGCGGAGTGCGAACCGGATAGCTTTGCGCAAGTCCCTCGCTCCTCTTCCATAT
CTCAGATTAACTCATGGATTCTACAGGGCAGTTCTATCTCCAGAAACAAAGGCTTGGTTGAACCAGCCTATCTCC
GAGGAAGATCGGGCCGCTCTTCGTGGCTTCGATTAG
Transcript >Agabi119p4|637100
ATGGTCAACGGCTCGGATAATTCGGCTTGGGAGATGAGTGGTTCCCCCGCTCCTCCTCTGCCAACCACAGACCCG
GTCGAGTTACGAGCTCGTGCTCTGCTCTCAGCCCGAGCGTCTGCAATAATCGAGTCCCATCTCCCAAATTCGATG
CTCAGCCAGGCGGCCGCCCAAACGGACGCCAGAGCTCTTTGGAGTTGGTTAGAAGGCCAGTACGGCCAAAAAGGA
CCGACATTCGCTTACGAGCGATTTGTCACGGCTCAGAATTTCAAGATTAATGACTCCGCGGATCCATCGTCTGCG
ATTGCAGATCTCTACGCCCTATTCGCTGCTGTTGAAAGCACCGGTGCGTTGATCCACGAGTCGATCCGCACCATG
ATGCTCCTCAACGCTCTCCCCAACCGGTTCGAGCATGTCGCTTCGAACATTCTTGCTGAGAAAAGATCGGTCGCC
GATCTTAAATGGGAGGAAACCCGTGCCCGCATCATCGCCGCGTGGCGCAACCCCCATACAGTTGCCAATGCTGCG
TGTTTCCGCCAGCAAAACCAGCCTAAACCTAAATGGGACAACAAGAAACCCGATCAAGGTCAGGGTAAGTCCCAA
GGCTCTGGTTCTGGTTCTGGCTCCAGCCAGAACCAAAATAAGCAACAACAACCTCAGCAGAAAGGTGAGCAGCAG
AGTGAAGGCAACAAGAAGAAGAGAACCCGCTCCCGTAAAAAGAAGCAGGGTAATGAGGCTTCTACAGCCTCTATC
AAAGAAGTCAAGGACACCACTCCTGACTACTCCGCTTCTTCTGCCATCGCTTCGATGACGCGGCTCGCATCCAAC
TCTACTCGTGCGAAAGTTGATGAGATGAAGAGCAGGTTTGTCCCGCTACCATCTAGATCAGATCCAAATCTAACG
AGGAATAGATCGCCCAAGTTGGGCAACCATACTATTTCGGGTGAGGAATTTCTCTTCTTCCCTGATGGTAATATG
ATTGATCTTTCCCCTCCGGATACTGACATTGACTCTTGGACTTTGCCTCGGCTTCGTCCCGCAATGCGAAATCTC
CTTTCGGACGAATCTGATGTTGATCTTGATCCATCAGACTCCGGGTCGATCCCTCGGGACCCTCGGAAACGTCCT
TCCTCTCGCCATTCCCCCACGCCCTACGAAAGGGCCAAGACGAAAGTGTTATCCCTTTGGGATCAACGTCTTAAC
GCAGTGACTGTAACAGCCCCTCCAATCGAGGATGGGGCCGGTCAAGTGGGTGGTAATGCTCCGGCTGTAAAAATG
CCGGCTACGAAAGGAAACAAGTTGAGAAGATGGATGTCGATAAGGCTGATGAGATTTCTCTCGGCGATGAAGATG
GAGAATTTGAGTATGAATACGATGCGGAGTGCGAACCGGATAGCTTTGCGCAAGTCCCTCGCTCCTCTTCCATAT
CTCAGATTAACTCATGGATTCTACAGGGCAGTTCTATCTCCAGAAACAAAGGCTTGGTTGAACCAGCCTATCTCC
GAGGAAGATCGGGCCGCTCTTCGTGGCTTCGATTAG
Gene >Agabi119p4|637100
ATGGTCAACGGCTCGGATAATTCGGCTTGGGAGATGAGTGGTTCCCCCGCTCCTCCTCTGCCAACCACAGACCCG
GTCGAGTTACGAGCTCGTGCTCTGCTCTCAGCCCGAGCGTCTGCAATAATCGAGTCCCATCTCCCAAATTCGATG
CTCAGCCAGGCGGCCGCCCAAACGGACGCCAGAGCTCTTTGGAGTTGGTTAGAAGGCCAGTACGGCCAAAAAGGA
CCGACATTCGCTTACGAGCGATTTGTCACGGCTCAGAATTTCAAGATTAATGACTCCGCGGATCCATCGTCTGCG
ATTGCAGATCTCTACGCCCTATTCGCTGCTGTTGAAAGCACCGGTGCGTTGATCCACGAGTCGATCCGCACCATG
ATGCTCCTCAACGCTCTCCCCAACCGGTTCGAGCATGTCGCTTCGAACATTCTTGCTGAGAAAAGATCGGTCGCC
GATCTTAAATGGGAGGAAACCCGTGCCCGCATCATCGCCGCGTGGCGCAACCCCCATACAGTTGCCAATGCTGCG
TGTTTCCGCCAGCAAAACCAGCCTAAACCTAAATGGGACAACAAGAAACCCGATCAAGGTCAGGGTAAGTCCCAA
GGCTCTGGTTCTGGTTCTGGCTCCAGCCAGAACCAAAATAAGCAACAACAACCTCAGCAGAAAGGTGAGCAGCAG
AGTGAAGGCAACAAGAAGAAGAGAACCCGCTCCCGTAAAAAGAAGCAGGGTAATGAGGCTTCTACAGCCTCTATC
AAAGAAGTCAAGGACACCACTCCTGACTACTCCGCTTCTTCTGCCATCGCTTCGATGACGCGGCTCGCATCCAAC
TCTACTCGTGCGAAAGTTGATGAGATGAAGAGCAGGTTTGTCCCGCTACCATCTAGATCAGATCCAAATCTAACG
AGGAATAGATCGCCCAAGTTGGGCAACCATACTATTTCGGGTGAGGAATTTCTCTTCTTCCCTGATGGTAATATG
ATTGATCTTTCCCCTCCGGATACTGACATTGACTCTTGGACTTTGCCTCGGCTTCGTCCCGCAATGCGAAATCTC
CTTTCGGACGAATCTGATGTTGATCTTGATCCATCAGACTCCGGGTCGATCCCTCGGGACCCTCGGAAACGTCCT
TCCTCTCGCCATTCCCCCACGCCCTACGAAAGGGCCAAGACGAAAGTGTTATCCCTTTGGGATCAACGTCTTAAC
GCAGTGACTGTAACAGCCCCTCCAATCGAGGATGGGGCCGGTCAAGTGGGTGGTAATGCTCCGGCTGTAAAAATG
CCGGCTACGAAAGGAAACAAGTTGAGAAGATGGATGTCGATAAGGCTGATGAGATTTCTCTCGGCGATGAAGATG
GAGAATTTGAGTATGAATACGATGCGGAGTGCGAACCGGATAGCTTTGCGCAAGTCCCTCGCTCCTCTTCCATAT
CTCAGATTAACTCATGGATTCTACAGGGCAGTTCTATCTCCAGAAACAAAGGCTTGGTTGAACCAGCCTATCTCC
GAGGAAGATCGGGCCGCTCTTCGTGGCTTCGATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail