Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|635100
Gene name
Locationscaffold_05a:151602..152755
Strand+
Gene length (bp)1153
Transcript length (bp)1041
Coding sequence length (bp)1041
Protein length (aa) 347

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P19463|CON13_NEUCR Conidiation-specific protein 13 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=con-13 PE=2 SV=1 77 233 4.0E-11

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 31 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|635100
MARFSLGRSLFISKFFWLAINISFFNGAAAHLKRNTSQNNRTATTLTHLTPAQRDFDSFNLDGALYNPSRTYISL
SSLPSSCSVNQKLGERCLTEMRAVNVTYDDCSDAWTLCHCSSANITLEDSMSRLGKVPVGLRKFIGTTLVFPAEE
AHAYTLTNGDIYFFGELDTDSWIHEASHAYDYAFGDPVSGRQDWLDAIGNDTCATDVYGMTNEAEEFAQSSILKI
FSLIYGSLPPGWNASSMSHQQKFLDSLPLYDKNTLFADTCATISDATHQDSQIAAVRPIKSNGPLPNPNAPLRID
PSADPIVSLIDRVPQSIASDPSERNSALSSGKSWLFGSISFVILIL*
Coding >Agabi119p4|635100
ATGGCAAGATTTTCCCTCGGCCGATCGCTCTTCATCTCTAAATTCTTTTGGCTGGCTATAAATATCTCCTTTTTC
AATGGGGCCGCAGCTCACCTAAAACGCAATACCAGTCAGAATAACCGGACCGCTACTACTCTCACCCATCTCACT
CCAGCACAACGAGACTTTGATTCTTTCAATTTGGATGGCGCCCTCTACAATCCGTCCAGAACTTACATTTCGCTA
TCTTCACTTCCATCAAGTTGTTCGGTGAATCAAAAGCTTGGAGAACGATGTCTTACGGAAATGAGGGCTGTCAAC
GTCACGTATGATGATTGTTCAGATGCGTGGACGTTGTGTCATTGTAGTTCTGCGAATATCACTTTGGAGGATTCG
ATGTCTAGATTAGGAAAGGTACCGGTTGGGTTGAGAAAGTTCATTGGGACAACGCTTGTCTTTCCAGCTGAAGAG
GCACATGCGTATACCCTTACGAATGGTGATATATATTTCTTTGGAGAACTTGATACGGACAGTTGGATTCATGAG
GCGAGTCATGCTTATGATTATGCGTTTGGAGATCCAGTTTCGGGACGTCAGGATTGGTTGGACGCCATCGGAAAC
GATACATGCGCAACCGATGTTTATGGCATGACAAACGAAGCTGAGGAGTTTGCCCAATCAAGCATATTGAAAATC
TTTTCTCTCATCTACGGATCACTTCCTCCCGGATGGAACGCGAGTAGTATGTCCCATCAACAAAAATTTCTGGAC
TCACTTCCTCTTTACGACAAAAACACCCTCTTTGCCGATACTTGTGCCACCATCTCCGACGCGACACACCAGGAC
AGCCAAATTGCAGCGGTTCGACCGATCAAATCGAATGGTCCATTACCGAACCCTAATGCCCCGTTGCGAATAGAT
CCAAGCGCTGATCCCATTGTTTCGTTAATTGACAGGGTACCTCAATCAATTGCAAGTGATCCTAGTGAGAGGAAT
TCTGCTTTGTCTAGTGGTAAAAGTTGGCTATTTGGTAGTATCTCATTCGTTATTCTGATTTTGTAG
Transcript >Agabi119p4|635100
ATGGCAAGATTTTCCCTCGGCCGATCGCTCTTCATCTCTAAATTCTTTTGGCTGGCTATAAATATCTCCTTTTTC
AATGGGGCCGCAGCTCACCTAAAACGCAATACCAGTCAGAATAACCGGACCGCTACTACTCTCACCCATCTCACT
CCAGCACAACGAGACTTTGATTCTTTCAATTTGGATGGCGCCCTCTACAATCCGTCCAGAACTTACATTTCGCTA
TCTTCACTTCCATCAAGTTGTTCGGTGAATCAAAAGCTTGGAGAACGATGTCTTACGGAAATGAGGGCTGTCAAC
GTCACGTATGATGATTGTTCAGATGCGTGGACGTTGTGTCATTGTAGTTCTGCGAATATCACTTTGGAGGATTCG
ATGTCTAGATTAGGAAAGGTACCGGTTGGGTTGAGAAAGTTCATTGGGACAACGCTTGTCTTTCCAGCTGAAGAG
GCACATGCGTATACCCTTACGAATGGTGATATATATTTCTTTGGAGAACTTGATACGGACAGTTGGATTCATGAG
GCGAGTCATGCTTATGATTATGCGTTTGGAGATCCAGTTTCGGGACGTCAGGATTGGTTGGACGCCATCGGAAAC
GATACATGCGCAACCGATGTTTATGGCATGACAAACGAAGCTGAGGAGTTTGCCCAATCAAGCATATTGAAAATC
TTTTCTCTCATCTACGGATCACTTCCTCCCGGATGGAACGCGAGTAGTATGTCCCATCAACAAAAATTTCTGGAC
TCACTTCCTCTTTACGACAAAAACACCCTCTTTGCCGATACTTGTGCCACCATCTCCGACGCGACACACCAGGAC
AGCCAAATTGCAGCGGTTCGACCGATCAAATCGAATGGTCCATTACCGAACCCTAATGCCCCGTTGCGAATAGAT
CCAAGCGCTGATCCCATTGTTTCGTTAATTGACAGGGTACCTCAATCAATTGCAAGTGATCCTAGTGAGAGGAAT
TCTGCTTTGTCTAGTGGTAAAAGTTGGCTATTTGGTAGTATCTCATTCGTTATTCTGATTTTGTAG
Gene >Agabi119p4|635100
ATGGCAAGATTTTCCCTCGGCCGATCGCTCTTCATCTCTAAATTCTTTTGGCTGGCTATAAATATCTCCTTTTTC
AATGGGGCCGCAGCTCACCTAAAACGCAATACCAGTCAGAATAACCGGACCGCTACTACTCTCACCCATCTCACT
CCAGCACAACGAGACTTTGATTCTTTCAATTTGGATGGCGCCCTCTACAATCCGTCCAGAACTTACATTTCGCTA
TCTTCACTTCCATCAAGTTGTTCGGTGAATCAAAAGCTTGGAGAACGATGTCTTACGGAAATGAGGGCTGTCAAC
GTCACGTATGATGATTGTTCAGATGCGTGGACGTTGTGTCATTGTAGTTCTGCGAATATCACTTTGGAGGATTCG
ATGTCTAGATTAGGAAAGGTACCGGTTGGGTTGAGAAAGTTCATTGGGACAACGCTTGTCTTTCCAGCTGAAGAG
GCACATGCGTATACCCTTACGAATGGTGATATATATTTCTTTGGAGAACTTGATACGGACAGTTGGATTCATGAG
GTATTTAATGTCCATATACTTTATGACTGCGATTTGATGGTTTTTTTCTCTCTTAGGCGAGTCATGCTTATGATT
ATGCGTTTGGAGATCCAGTTTCGGGACGTCAGGATTGGTTGGACGCCATCGGAAACGATACATGCGCAACCGATG
TTTATGGCATGACAAACGAAGCTGAGGTACAAATCATTTTTCCAACCTCAATATCCGTCTCATACTTTCTGAAAT
ACATTAGGAGTTTGCCCAATCAAGCATATTGAAAATCTTTTCTCTCATCTACGGATCACTTCCTCCCGGATGGAA
CGCGAGTAGTATGTCCCATCAACAAAAATTTCTGGACTCACTTCCTCTTTACGACAAAAACACCCTCTTTGCCGA
TACTTGTGCCACCATCTCCGACGCGACACACCAGGACAGCCAAATTGCAGCGGTTCGACCGATCAAATCGAATGG
TCCATTACCGAACCCTAATGCCCCGTTGCGAATAGATCCAAGCGCTGATCCCATTGTTTCGTTAATTGACAGGGT
ACCTCAATCAATTGCAAGTGATCCTAGTGAGAGGAATTCTGCTTTGTCTAGTGGTAAAAGTTGGCTATTTGGTAG
TATCTCATTCGTTATTCTGATTTTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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