Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|633800
Gene name
Locationscaffold_05a:27876..29412
Strand+
Gene length (bp)1536
Transcript length (bp)1359
Coding sequence length (bp)1359
Protein length (aa) 453

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12937 F-box-like F-box-like 5.6E-08 31 94

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID5
Orthogroup8186
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|078330
Agaricus bisporus var bisporus H97 AgabiH97|078330
Agaricus bisporus var burnettii H119p4 Agabi119p4|633800 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|633800
MLPRMLLFSALRSRRSTETSVFSFPQCSMVNLPPEILGEIFTAYISLPSSTACWEDSNVLSSARGDSPMILGQIC
SYWRRVALSMPLLWSSIYIECPMPDHVELIQTWLDRAGTCPLDLCLRDWLDSSNRGCSEGTEAILKIFVEKSRSW
RSIDLVIELRESSILDELEWDSCPNLETAALSARYWNQETLDTLWAKVHRSPSLRQVNWYRCFQNGLPSHTPWAQ
LRHIRTLNELSDTDIIFLLRACPNLRSLDTRYTASLSGQLNSSSIISHSDLESLFLNVVSHSTPLFDHISLPSLR
TLRLTNECSSDPLDIDETIGRPVEGCLQRSACSLRVLEVFHFDRGNDLTQFLQSILYVPATRDLSRFDLYPLRSD
ACEHDMLAKHPSQCVRECASAMENDRCVPDVNPFLLLDKDSVDEDSIKIEWDLLSPLPENDRTTFTHHHLAQLHF
DD*
Coding >Agabi119p4|633800
ATGTTGCCTAGGATGTTGCTATTCTCTGCTCTTCGCTCTCGTCGTTCAACGGAAACCTCTGTTTTCTCTTTTCCT
CAATGTTCGATGGTCAATCTACCACCTGAAATCCTGGGTGAAATATTTACGGCCTACATCTCTCTACCCTCAAGT
ACAGCATGCTGGGAGGATAGTAACGTTCTCAGTAGTGCCAGAGGCGACAGCCCGATGATTCTCGGTCAAATATGT
TCCTACTGGAGAAGAGTTGCGCTCAGCATGCCACTGTTGTGGTCTTCCATCTATATCGAGTGTCCAATGCCTGAC
CATGTGGAGCTTATACAAACGTGGTTGGACCGGGCTGGGACATGTCCTTTGGACTTATGTCTGCGGGACTGGTTG
GATAGCAGCAATCGAGGGTGCTCGGAAGGCACGGAAGCGATTTTGAAGATATTTGTCGAAAAGTCGAGATCGTGG
AGAAGTATTGACCTCGTGATTGAACTCCGCGAGTCGTCGATTTTGGATGAGCTCGAGTGGGACTCATGTCCTAAT
CTGGAAACAGCCGCCCTAAGCGCTCGGTATTGGAACCAGGAAACTTTAGACACGCTTTGGGCGAAAGTTCACCGT
AGCCCTTCCCTTCGTCAAGTAAACTGGTATCGGTGCTTCCAAAACGGTCTTCCGTCTCATACTCCCTGGGCGCAA
CTGCGGCACATCCGGACTCTCAACGAACTCTCAGATACAGACATCATTTTCCTTCTTCGAGCTTGTCCTAATCTT
CGTTCCCTGGACACACGGTATACCGCCTCCCTCTCCGGACAATTGAACTCGTCTTCTATAATATCTCATAGCGAC
CTCGAATCTCTTTTCCTCAATGTCGTCAGTCATTCAACCCCTCTTTTCGATCACATTTCTCTCCCCTCCCTACGG
ACGCTACGTCTTACCAACGAATGTTCTTCCGACCCCCTTGACATTGACGAGACGATTGGGAGACCTGTGGAGGGT
TGTCTCCAACGATCTGCCTGCTCCCTACGCGTATTAGAAGTTTTCCATTTCGATCGTGGAAATGATCTCACGCAG
TTCCTGCAATCCATCCTCTACGTCCCTGCGACACGAGATCTGTCTCGTTTCGACCTGTATCCTCTACGAAGCGAC
GCATGCGAACACGACATGTTGGCCAAGCATCCTTCCCAATGTGTTCGTGAATGTGCCTCAGCCATGGAGAATGAC
CGATGCGTTCCCGACGTGAACCCATTCCTGCTTTTGGACAAGGATTCCGTGGATGAGGATAGTATTAAAATTGAG
TGGGATCTCTTATCGCCCTTGCCTGAAAATGATCGGACGACATTCACACATCACCATCTAGCCCAGCTTCACTTC
GATGATTAA
Transcript >Agabi119p4|633800
ATGTTGCCTAGGATGTTGCTATTCTCTGCTCTTCGCTCTCGTCGTTCAACGGAAACCTCTGTTTTCTCTTTTCCT
CAATGTTCGATGGTCAATCTACCACCTGAAATCCTGGGTGAAATATTTACGGCCTACATCTCTCTACCCTCAAGT
ACAGCATGCTGGGAGGATAGTAACGTTCTCAGTAGTGCCAGAGGCGACAGCCCGATGATTCTCGGTCAAATATGT
TCCTACTGGAGAAGAGTTGCGCTCAGCATGCCACTGTTGTGGTCTTCCATCTATATCGAGTGTCCAATGCCTGAC
CATGTGGAGCTTATACAAACGTGGTTGGACCGGGCTGGGACATGTCCTTTGGACTTATGTCTGCGGGACTGGTTG
GATAGCAGCAATCGAGGGTGCTCGGAAGGCACGGAAGCGATTTTGAAGATATTTGTCGAAAAGTCGAGATCGTGG
AGAAGTATTGACCTCGTGATTGAACTCCGCGAGTCGTCGATTTTGGATGAGCTCGAGTGGGACTCATGTCCTAAT
CTGGAAACAGCCGCCCTAAGCGCTCGGTATTGGAACCAGGAAACTTTAGACACGCTTTGGGCGAAAGTTCACCGT
AGCCCTTCCCTTCGTCAAGTAAACTGGTATCGGTGCTTCCAAAACGGTCTTCCGTCTCATACTCCCTGGGCGCAA
CTGCGGCACATCCGGACTCTCAACGAACTCTCAGATACAGACATCATTTTCCTTCTTCGAGCTTGTCCTAATCTT
CGTTCCCTGGACACACGGTATACCGCCTCCCTCTCCGGACAATTGAACTCGTCTTCTATAATATCTCATAGCGAC
CTCGAATCTCTTTTCCTCAATGTCGTCAGTCATTCAACCCCTCTTTTCGATCACATTTCTCTCCCCTCCCTACGG
ACGCTACGTCTTACCAACGAATGTTCTTCCGACCCCCTTGACATTGACGAGACGATTGGGAGACCTGTGGAGGGT
TGTCTCCAACGATCTGCCTGCTCCCTACGCGTATTAGAAGTTTTCCATTTCGATCGTGGAAATGATCTCACGCAG
TTCCTGCAATCCATCCTCTACGTCCCTGCGACACGAGATCTGTCTCGTTTCGACCTGTATCCTCTACGAAGCGAC
GCATGCGAACACGACATGTTGGCCAAGCATCCTTCCCAATGTGTTCGTGAATGTGCCTCAGCCATGGAGAATGAC
CGATGCGTTCCCGACGTGAACCCATTCCTGCTTTTGGACAAGGATTCCGTGGATGAGGATAGTATTAAAATTGAG
TGGGATCTCTTATCGCCCTTGCCTGAAAATGATCGGACGACATTCACACATCACCATCTAGCCCAGCTTCACTTC
GATGATTAA
Gene >Agabi119p4|633800
ATGTTGCCTAGGATGTGTGAGTTCATCCCGGTAGCGCGTTGATCGCCATCTCACAGCTACTGTGTCGTAGTGCTA
TTCTCTGCTCTTCGCTCTCGTCGTTCAACGTTCAACCCCTCATCGGCCCTACACTCTTGCGATGTCAGCCTTATC
TCCTATTCATAACTATTCAAGGGAAACCTCTGGTTAGTGTGCAACACCATCACGCATCACGTTCAGGTGAACTAA
CTTAGCAGAGTAGTTTTCTCTTTTCCTCAATGTTCGATGGTCAATCTACCACCTGAAATCCTGGGTGAAATATTT
ACGGCCTACATCTCTCTACCCTCAAGTACAGCATGCTGGGAGGATAGTAACGTTCTCAGTAGTGCCAGAGGCGAC
AGCCCGATGATTCTCGGTCAAATATGTTCCTACTGGAGAAGAGTTGCGCTCAGCATGCCACTGTTGTGGTCTTCC
ATCTATATCGAGTGTCCAATGCCTGACCATGTGGAGCTTATACAAACGTGGTTGGACCGGGCTGGGACATGTCCT
TTGGACTTATGTCTGCGGGACTGGTTGGATAGCAGCAATCGAGGGTGCTCGGAAGGCACGGAAGCGATTTTGAAG
ATATTTGTCGAAAAGTCGAGATCGTGGAGAAGTATTGACCTCGTGATTGAACTCCGCGAGTCGTCGATTTTGGAT
GAGCTCGAGTGGGACTCATGTCCTAATCTGGAAACAGCCGCCCTAAGCGCTCGGTATTGGAACCAGGAAACTTTA
GACACGCTTTGGGCGAAAGTTCACCGTAGCCCTTCCCTTCGTCAAGTAAACTGGTATCGGTGCTTCCAAAACGGT
CTTCCGTCTCATACTCCCTGGGCGCAACTGCGGCACATCCGGACTCTCAACGAACTCTCAGATACAGACATCATT
TTCCTTCTTCGAGCTTGTCCTAATCTTCGTTCCCTGGACACACGGTATACCGCCTCCCTCTCCGGACAATTGAAC
TCGTCTTCTATAATATCTCATAGCGACCTCGAATCTCTTTTCCTCAATGTCGTCAGTCATTCAACCCCTCTTTTC
GATCACATTTCTCTCCCCTCCCTACGGACGCTACGTCTTACCAACGAATGTTCTTCCGACCCCCTTGACATTGAC
GAGACGATTGGGAGACCTGTGGAGGGTTGTCTCCAACGATCTGCCTGCTCCCTACGCGTATTAGAAGTTTTCCAT
TTCGATCGTGGAAATGATCTCACGCAGTTCCTGCAATCCATCCTCTACGTCCCTGCGACACGAGATCTGTCTCGT
TTCGACCTGTATCCTCTACGAAGCGACGCATGCGAACACGACATGTTGGCCAAGCATCCTTCCCAATGTGTTCGT
GAATGTGCCTCAGCCATGGAGAATGACCGATGCGTTCCCGACGTGAACCCATTCCTGCTTTTGGACAAGGATTCC
GTGGATGAGGATAGTATTAAAATTGAGTGGGATCTCTTATCGCCCTTGCCTGAAAATGATCGGACGACATTCACA
CATCACCATCTAGCCCAGCTTCACTTCGATGATTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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