Protein ID | Agabi119p4|633100 |
Gene name | |
Location | scaffold_04:3029800..3031608 |
Strand | - |
Gene length (bp) | 1808 |
Transcript length (bp) | 1227 |
Coding sequence length (bp) | 1227 |
Protein length (aa) | 409 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00544 | Pectate_lyase_4 | Pectate lyase | 2.4E-33 | 175 | 342 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q4WIT0|PLYA_ASPFU | Probable pectate lyase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=plyA PE=3 SV=1 | 93 | 408 | 1.0E-103 |
sp|B0XT32|PLYA_ASPFC | Probable pectate lyase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=plyA PE=3 SV=1 | 93 | 408 | 1.0E-103 |
sp|A2QV36|PLYA_ASPNC | Probable pectate lyase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=plyA PE=3 SV=1 | 109 | 408 | 4.0E-103 |
sp|Q9C2Z0|PLYA_ASPNG | Pectate lyase A OS=Aspergillus niger GN=plyA PE=1 SV=1 | 109 | 408 | 7.0E-103 |
sp|A1CYB8|PLYA_NEOFI | Probable pectate lyase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=plyA PE=3 SV=1 | 93 | 408 | 1.0E-102 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q4WIT0|PLYA_ASPFU | Probable pectate lyase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=plyA PE=3 SV=1 | 93 | 408 | 1.0E-103 |
sp|B0XT32|PLYA_ASPFC | Probable pectate lyase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=plyA PE=3 SV=1 | 93 | 408 | 1.0E-103 |
sp|A2QV36|PLYA_ASPNC | Probable pectate lyase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=plyA PE=3 SV=1 | 109 | 408 | 4.0E-103 |
sp|Q9C2Z0|PLYA_ASPNG | Pectate lyase A OS=Aspergillus niger GN=plyA PE=1 SV=1 | 109 | 408 | 7.0E-103 |
sp|A1CYB8|PLYA_NEOFI | Probable pectate lyase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=plyA PE=3 SV=1 | 93 | 408 | 1.0E-102 |
sp|Q5AVN4|PLYA_EMENI | Pectate lyase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=plyA PE=1 SV=1 | 113 | 408 | 2.0E-98 |
sp|Q2U8R6|PLYA_ASPOR | Probable pectate lyase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=plyA PE=3 SV=1 | 91 | 408 | 1.0E-97 |
sp|B8NE46|PLYA_ASPFN | Probable pectate lyase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=plyA PE=3 SV=1 | 91 | 408 | 1.0E-97 |
sp|O59939|PLYB_COLGL | Pectate lyase B OS=Colletotrichum gloeosporioides GN=PLB PE=3 SV=1 | 150 | 408 | 3.0E-84 |
sp|Q2TZY0|PLYB_ASPOR | Probable pectate lyase B OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=plyB PE=3 SV=1 | 93 | 406 | 6.0E-73 |
sp|B8NBC2|PLYB_ASPFN | Probable pectate lyase B OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=plyB PE=3 SV=1 | 93 | 406 | 6.0E-73 |
sp|Q0CBV0|PLYB_ASPTN | Probable pectate lyase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=plyB PE=3 SV=1 | 92 | 406 | 1.0E-70 |
sp|Q00645|PLYB_EMENI | Pectate lyase plyB OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=plyB PE=1 SV=1 | 89 | 406 | 2.0E-69 |
sp|B1B6T1|PTLY_BACSP | Pectate trisaccharide-lyase OS=Bacillus sp. GN=pel PE=1 SV=1 | 119 | 403 | 1.0E-46 |
sp|Q8GCB2|PTLY_BACLI | Pectate trisaccharide-lyase OS=Bacillus licheniformis GN=pelA PE=1 SV=1 | 119 | 403 | 1.0E-46 |
sp|Q65DC2|PTLY_BACLD | Pectate trisaccharide-lyase OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / NBRC 12200 / NCIMB 9375 / NRRL NRS-1264 / Gibson 46) GN=BLi04129 PE=3 SV=1 | 119 | 403 | 1.0E-46 |
sp|Q12639|PELA_PEYPI | Pectin lyase OS=Peyronellaea pinodes GN=PELA PE=3 SV=1 | 217 | 305 | 1.0E-33 |
sp|P0C1A5|PLYE_DICD3 | Pectate lyase E OS=Dickeya dadantii (strain 3937) GN=pelE PE=3 SV=2 | 92 | 397 | 9.0E-28 |
sp|P0C1A4|PLYE2_DICCH | Pectate lyase E OS=Dickeya chrysanthemi GN=pelE PE=3 SV=1 | 92 | 344 | 3.0E-27 |
sp|P04960|PLYE1_DICCH | Pectate lyase E OS=Dickeya chrysanthemi GN=pelE PE=1 SV=1 | 92 | 321 | 5.0E-25 |
sp|P18209|PLYD_DICCH | Pectate lyase D OS=Dickeya chrysanthemi GN=pelD PE=3 SV=1 | 88 | 321 | 6.0E-25 |
sp|P0C1A2|PLYA_DICCH | Pectate lyase A OS=Dickeya chrysanthemi GN=pelA PE=1 SV=1 | 91 | 325 | 2.0E-22 |
sp|Q9WYR4|PTLY_THEMA | Pectate trisaccharide-lyase OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=pelA PE=1 SV=1 | 116 | 343 | 1.0E-21 |
sp|B1L969|PTLY_THESQ | Pectate trisaccharide-lyase OS=Thermotoga sp. (strain RQ2) GN=pelA PE=3 SV=1 | 116 | 343 | 5.0E-21 |
sp|P0C1A3|PLYA_DICD3 | Pectate lyase A OS=Dickeya dadantii (strain 3937) GN=pelA PE=3 SV=1 | 95 | 324 | 6.0E-21 |
sp|P24112|PELD_PECCA | Pectin lyase OS=Pectobacterium carotovorum GN=pnl PE=1 SV=1 | 135 | 403 | 7.0E-21 |
sp|Q60140|PLY_PSEVI | Pectate lyase OS=Pseudomonas viridiflava GN=pel PE=3 SV=1 | 96 | 319 | 2.0E-20 |
sp|Q51915|PLY_PSEMA | Pectate lyase OS=Pseudomonas marginalis GN=pel PE=1 SV=1 | 121 | 319 | 1.0E-19 |
sp|Q59671|PLY_PSEFL | Pectate lyase OS=Pseudomonas fluorescens GN=pel PE=3 SV=1 | 121 | 319 | 3.0E-17 |
sp|P15721|PLY56_SOLLC | Probable pectate lyase P56 OS=Solanum lycopersicum GN=LAT56 PE=2 SV=2 | 166 | 380 | 1.0E-16 |
sp|P72242|PLY_PSEAV | Pectate lyase OS=Pseudomonas amygdali pv. lachrymans GN=pelP PE=3 SV=1 | 121 | 319 | 2.0E-16 |
sp|Q56806|PLY_XANCM | Pectate lyase OS=Xanthomonas campestris pv. malvacearum PE=3 SV=1 | 121 | 403 | 8.0E-16 |
sp|P0C1C0|PLY1_PECCA | Pectate lyase 1 OS=Pectobacterium carotovorum GN=pel1 PE=1 SV=1 | 126 | 403 | 4.0E-15 |
sp|P04959|PLYB_DICCH | Pectate lyase B OS=Dickeya chrysanthemi GN=pelB PE=3 SV=1 | 182 | 403 | 3.0E-14 |
sp|P81294|PLY1_JUNAS | Pectate lyase 1 OS=Juniperus ashei PE=1 SV=1 | 191 | 348 | 5.0E-14 |
sp|Q9SCG9|PLY1_HESAR | Pectate lyase 1 OS=Hesperocyparis arizonica PE=1 SV=2 | 188 | 346 | 7.0E-14 |
sp|Q9FM66|PLY21_ARATH | Putative pectate lyase 21 OS=Arabidopsis thaliana GN=At5g55720 PE=3 SV=1 | 193 | 385 | 8.0E-14 |
sp|Q6CZT2|PLY3_PECAS | Pectate lyase 3 OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) GN=pel3 PE=3 SV=1 | 171 | 405 | 9.0E-14 |
sp|P0C1C3|PLY3_PECCC | Pectate lyase 3 OS=Pectobacterium carotovorum subsp. carotovorum GN=pel3 PE=3 SV=1 | 110 | 405 | 1.0E-13 |
sp|Q9LLT1|PLY1_JUNVI | Pectate lyase 1 OS=Juniperus virginiana PE=1 SV=1 | 188 | 346 | 2.0E-13 |
sp|P0C1C2|PLY3_PECCA | Pectate lyase 3 OS=Pectobacterium carotovorum GN=pel3 PE=1 SV=1 | 182 | 405 | 2.0E-13 |
sp|O34819|PEL1_BACSU | Pectin lyase OS=Bacillus subtilis (strain 168) GN=pelB PE=3 SV=1 | 133 | 403 | 3.0E-13 |
sp|P94449|PEL2_BACIU | Pectin lyase OS=Bacillus subtilis GN=pelB PE=1 SV=1 | 134 | 403 | 3.0E-13 |
sp|P0C1C1|PLY2_PECCA | Pectate lyase 2 OS=Pectobacterium carotovorum GN=pel2 PE=3 SV=1 | 182 | 345 | 8.0E-13 |
sp|Q96385|PLY1_CHAOB | Pectate lyase 1 OS=Chamaecyparis obtusa PE=1 SV=1 | 195 | 346 | 1.0E-12 |
sp|P40972|PLY_TOBAC | Pectate lyase OS=Nicotiana tabacum PE=2 SV=1 | 168 | 321 | 1.0E-12 |
sp|Q6CZT3|PLY2_PECAS | Pectate lyase 2 OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) GN=pel2 PE=1 SV=1 | 126 | 345 | 1.0E-12 |
sp|P11073|PLYC_DICCH | Pectate lyase C OS=Dickeya chrysanthemi GN=pelC PE=1 SV=1 | 182 | 403 | 1.0E-12 |
sp|P18632|PLY1_CRYJA | Pectate lyase 1 OS=Cryptomeria japonica PE=1 SV=3 | 195 | 346 | 1.0E-12 |
sp|P27027|PELD_PSEMA | Pectin lyase OS=Pseudomonas marginalis GN=pnl PE=1 SV=2 | 126 | 403 | 3.0E-12 |
sp|P27762|PLY4_AMBAR | Pectate lyase 4 OS=Ambrosia artemisiifolia PE=1 SV=1 | 195 | 322 | 9.0E-12 |
sp|B3GQR3|PELE_ASPNG | Probable pectin lyase E OS=Aspergillus niger GN=pelE PE=3 SV=1 | 124 | 345 | 1.0E-11 |
sp|P39116|PLY_BACSU | Pectate lyase OS=Bacillus subtilis (strain 168) GN=pel PE=1 SV=1 | 174 | 322 | 1.0E-11 |
sp|Q2UJA7|PELF_ASPOR | Probable pectin lyase F OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=pelF PE=3 SV=2 | 175 | 345 | 2.0E-11 |
sp|B8N316|PELF_ASPFN | Probable pectin lyase F OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=pelF PE=3 SV=1 | 175 | 345 | 2.0E-11 |
sp|Q9C8G4|PLY4_ARATH | Probable pectate lyase 4 OS=Arabidopsis thaliana GN=At1g30350 PE=2 SV=1 | 189 | 349 | 3.0E-11 |
sp|O65388|PLY2_ARATH | Putative pectate lyase 2 OS=Arabidopsis thaliana GN=At1g11920 PE=3 SV=2 | 219 | 359 | 3.0E-11 |
sp|O65456|PLY16_ARATH | Probable pectate lyase 16 OS=Arabidopsis thaliana GN=At4g22080 PE=2 SV=1 | 219 | 322 | 5.0E-11 |
sp|Q9FXD8|PLY5_ARATH | Probable pectate lyase 5 OS=Arabidopsis thaliana GN=At1g67750 PE=2 SV=2 | 219 | 321 | 6.0E-11 |
sp|Q9LTZ0|PLY11_ARATH | Putative pectate lyase 11 OS=Arabidopsis thaliana GN=At3g27400 PE=3 SV=2 | 219 | 321 | 7.0E-11 |
sp|P24396|PLY18_SOLLC | Probable pectate lyase P18 OS=Solanum lycopersicum GN=9612 PE=2 SV=1 | 219 | 321 | 1.0E-10 |
sp|O65457|PLY17_ARATH | Putative pectate lyase 17 OS=Arabidopsis thaliana GN=At4g22090 PE=3 SV=1 | 219 | 322 | 1.0E-10 |
sp|O24554|PLY_ZINVI | Pectate lyase OS=Zinnia violacea PE=1 SV=1 | 219 | 321 | 3.0E-10 |
sp|P27761|PLY2_AMBAR | Pectate lyase 2 OS=Ambrosia artemisiifolia PE=1 SV=1 | 219 | 322 | 4.0E-10 |
sp|Q6CZT4|PLY1_PECAS | Pectate lyase 1 OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) GN=pel1 PE=1 SV=1 | 182 | 403 | 7.0E-10 |
sp|O64510|PLY6_ARATH | Probable pectate lyase 6 OS=Arabidopsis thaliana GN=At2g02720 PE=2 SV=1 | 193 | 321 | 9.0E-10 |
sp|Q9M9S2|PLY3_ARATH | Probable pectate lyase 3 OS=Arabidopsis thaliana GN=AT59 PE=2 SV=1 | 190 | 321 | 1.0E-09 |
sp|Q93Z25|PLY22_ARATH | Probable pectate lyase 22 OS=Arabidopsis thaliana GN=At5g63180 PE=2 SV=1 | 213 | 321 | 1.0E-09 |
sp|P15722|PLY59_SOLLC | Probable pectate lyase P59 OS=Solanum lycopersicum GN=LAT59 PE=2 SV=1 | 190 | 321 | 1.0E-09 |
sp|Q944R1|PLY15_ARATH | Probable pectate lyase 15 OS=Arabidopsis thaliana GN=At4g13710 PE=2 SV=1 | 213 | 321 | 2.0E-09 |
sp|Q9SVQ6|PLY14_ARATH | Putative pectate lyase 14 OS=Arabidopsis thaliana GN=At4g13210 PE=2 SV=2 | 213 | 321 | 3.0E-09 |
sp|P22864|PELD_ASPNG | Pectin lyase D OS=Aspergillus niger GN=pelD PE=1 SV=1 | 170 | 407 | 3.0E-09 |
sp|Q9LJ42|PLY10_ARATH | Probable pectate lyase 10 OS=Arabidopsis thaliana GN=At3g24670 PE=2 SV=2 | 213 | 321 | 4.0E-09 |
sp|A2RBL2|PELD_ASPNC | Probable pectin lyase D OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=pelD PE=3 SV=1 | 170 | 407 | 4.0E-09 |
sp|Q8NJK6|PELF_ASPNG | Probable pectin lyase F OS=Aspergillus niger GN=pelF PE=3 SV=1 | 175 | 342 | 4.0E-09 |
sp|A2R6A1|PELF_ASPNC | Probable pectin lyase F OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=pelF PE=3 SV=1 | 175 | 342 | 4.0E-09 |
sp|Q9SCP2|PLY12_ARATH | Probable pectate lyase 12 OS=Arabidopsis thaliana GN=At3g53190 PE=2 SV=2 | 219 | 321 | 4.0E-09 |
sp|P27760|PLY1_AMBAR | Pectate lyase 1 OS=Ambrosia artemisiifolia PE=1 SV=1 | 219 | 322 | 6.0E-09 |
sp|Q9C5M8|PLY18_ARATH | Probable pectate lyase 18 OS=Arabidopsis thaliana GN=At4g24780 PE=2 SV=2 | 213 | 321 | 6.0E-09 |
sp|Q2TXM4|PELA_ASPOR | Probable pectin lyase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=pelA PE=3 SV=1 | 175 | 345 | 6.0E-09 |
sp|Q9LRM5|PLY9_ARATH | Probable pectate lyase 9 OS=Arabidopsis thaliana GN=At3g24230 PE=2 SV=1 | 219 | 321 | 7.0E-09 |
sp|Q93Z04|PLY13_ARATH | Probable pectate lyase 13 OS=Arabidopsis thaliana GN=PMR6 PE=1 SV=1 | 219 | 321 | 8.0E-09 |
sp|Q940Q1|PLY1_ARATH | Probable pectate lyase 1 OS=Arabidopsis thaliana GN=At1g04680 PE=2 SV=2 | 213 | 321 | 2.0E-08 |
sp|P27759|PLY5_AMBAR | Pectate lyase 5 OS=Ambrosia artemisiifolia PE=1 SV=1 | 195 | 322 | 2.0E-08 |
sp|P40973|PLY_LILLO | Pectate lyase OS=Lilium longiflorum PE=2 SV=1 | 219 | 321 | 3.0E-08 |
sp|Q9SRH4|PLY7_ARATH | Probable pectate lyase 7 OS=Arabidopsis thaliana GN=At3g01270 PE=2 SV=1 | 114 | 321 | 5.0E-08 |
sp|Q5B3J8|PELF_EMENI | Probable pectin lyase F OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=pelF PE=3 SV=1 | 175 | 366 | 5.0E-08 |
sp|Q9M8Z8|PLY8_ARATH | Probable pectate lyase 8 OS=Arabidopsis thaliana GN=At3g07010 PE=2 SV=1 | 213 | 321 | 8.0E-08 |
sp|Q0CZD4|PELF2_ASPTN | Probable pectin lyase F-2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=pelF-2 PE=3 SV=1 | 170 | 366 | 8.0E-08 |
sp|Q2TXS4|PELD_ASPOR | Pectin lyase 2 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=pel2 PE=1 SV=1 | 170 | 345 | 8.0E-08 |
sp|B8NVB7|PELD_ASPFN | Probable pectin lyase D OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=pelD PE=3 SV=1 | 170 | 345 | 8.0E-08 |
sp|Q9LFP5|PLY19_ARATH | Probable pectate lyase 19 OS=Arabidopsis thaliana GN=At5g15110 PE=2 SV=1 | 213 | 353 | 9.0E-08 |
sp|A2QFN7|PELB_ASPNC | Probable pectin lyase B OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=pelB PE=3 SV=1 | 175 | 352 | 2.0E-07 |
sp|A1CFS2|PELA_ASPCL | Probable pectin lyase A OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=pelA PE=3 SV=1 | 175 | 345 | 2.0E-07 |
sp|Q00205|PELB_ASPNG | Pectin lyase B OS=Aspergillus niger GN=pelB PE=1 SV=1 | 175 | 343 | 3.0E-07 |
sp|Q93WF1|PLY20_ARATH | Probable pectate lyase 20 OS=Arabidopsis thaliana GN=At5g48900 PE=2 SV=1 | 213 | 321 | 3.0E-07 |
sp|Q5BA61|PELB_EMENI | Pectin lyase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=pelB PE=2 SV=1 | 175 | 345 | 3.0E-07 |
sp|Q2TWM1|PELB_ASPOR | Pectin lyase 1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=pel1 PE=2 SV=1 | 175 | 345 | 5.0E-07 |
sp|Q5AQJ1|PELD_EMENI | Probable pectin lyase D OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=pelD PE=3 SV=1 | 175 | 345 | 7.0E-07 |
sp|Q4WIS6|PELB_ASPFU | Probable pectin lyase B OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pelB PE=3 SV=1 | 175 | 345 | 8.0E-07 |
sp|B0XT36|PELA_ASPFC | Probable pectin lyase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=pelA PE=3 SV=1 | 175 | 345 | 8.0E-07 |
sp|Q4WV10|PELA_ASPFU | Probable pectin lyase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pelA PE=3 SV=1 | 175 | 345 | 1.0E-06 |
sp|Q5BAU9|PELA_EMENI | Pectin lyase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=pelA PE=1 SV=2 | 170 | 345 | 2.0E-06 |
sp|Q0CYL8|PELA_ASPTN | Probable pectin lyase A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=pelA PE=3 SV=1 | 175 | 404 | 2.0E-06 |
sp|A2R3I1|PELA_ASPNC | Probable pectin lyase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=pelA PE=3 SV=1 | 175 | 345 | 5.0E-06 |
sp|Q01172|PELA_ASPNG | Pectin lyase A OS=Aspergillus niger GN=pelA PE=1 SV=1 | 175 | 345 | 5.0E-06 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 20 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Agabi119p4|633100 MFNWFRLNFSLSRPSKYVSIRRRIPTFCSSRIQTYWRRPPRAGRTALYLQKNSISSPAVRPVDQKRRVKVFQEDL STRTWLSSSDSTAFCSTMRILASIVAFAAVQLAAAGTIQRRASVNDVANLGYATLNGGTSGGSGGSQTTVTTLDQ LTSAVSGDSRKIVLISGRISGSAVVRVGSNTSILGQPGSLLDGVGLRVLGESNVIIRNVKISRVVADVGDALGIQ EAHQVWVDHVDLSSDRDHDKDFYDGLLDITHGCTGITVTNSRLHDHWKGSLVGHSDSNGSEDTPMTVTYANNWWH NLNSRTPSFRFGHGHIFNNVFDANADGINTRDGAQLLVENNVWTNPAKQKPLYSTDGGFAVARGNDFGGGENTAP AGNFNSPPYSYSLQSTTTTRSNVPNTAGQNLSF* |
Coding | >Agabi119p4|633100 ATGTTTAACTGGTTCCGTCTGAACTTCTCCCTGAGTCGGCCAAGTAAATACGTTTCTATTCGGCGAAGAATACCT ACCTTTTGTTCGTCGCGTATACAGACATATTGGAGAAGACCGCCAAGGGCCGGGCGGACCGCTCTTTATTTGCAG AAGAATTCAATCTCATCGCCAGCTGTCAGGCCTGTCGATCAGAAACGGCGGGTTAAGGTGTTCCAGGAAGACCTT TCAACCAGAACTTGGTTGTCATCTTCTGACTCTACTGCTTTCTGCTCAACAATGAGGATTCTCGCTTCTATTGTG GCTTTCGCCGCTGTTCAACTTGCTGCTGCCGGTACCATTCAAAGGCGTGCATCCGTCAATGACGTTGCTAATCTT GGTTACGCAACTCTCAACGGAGGAACATCAGGTGGTTCAGGCGGGTCACAAACTACTGTGACTACTCTTGACCAA TTGACCAGCGCTGTCAGTGGCGACAGCAGAAAAATTGTCCTCATTTCTGGCCGCATCTCTGGTAGTGCTGTTGTT AGGGTAGGGTCCAACACTTCAATTCTTGGACAACCTGGATCCCTTCTTGACGGTGTTGGGCTCCGTGTTCTTGGG GAGAGCAATGTCATCATTCGCAACGTCAAGATCTCCAGGGTCGTTGCTGATGTCGGCGATGCCCTTGGCATTCAA GAAGCTCACCAAGTCTGGGTTGACCACGTTGACCTTTCCAGCGACAGGGACCACGACAAAGACTTCTACGACGGC CTTCTTGACATCACCCACGGATGCACGGGTATCACTGTCACGAACTCCAGGCTCCACGACCACTGGAAAGGCTCT CTCGTCGGTCATTCTGACAGTAACGGCAGCGAAGACACGCCTATGACCGTAACCTATGCCAACAATTGGTGGCAC AACCTCAACTCTCGTACCCCCTCTTTCCGGTTTGGTCATGGCCACATCTTCAACAATGTCTTCGACGCCAACGCC GATGGTATCAACACTCGTGATGGTGCTCAGCTGCTCGTTGAAAACAATGTTTGGACGAACCCTGCGAAGCAGAAG CCTCTCTATTCTACTGACGGAGGCTTCGCTGTTGCTCGTGGCAATGATTTCGGTGGAGGTGAAAACACGGCTCCG GCAGGCAACTTCAATAGCCCTCCCTACAGCTACAGTCTCCAATCCACGACTACCACGCGTAGCAATGTCCCTAAC ACAGCCGGCCAAAACTTGAGCTTCTGA |
Transcript | >Agabi119p4|633100 ATGTTTAACTGGTTCCGTCTGAACTTCTCCCTGAGTCGGCCAAGTAAATACGTTTCTATTCGGCGAAGAATACCT ACCTTTTGTTCGTCGCGTATACAGACATATTGGAGAAGACCGCCAAGGGCCGGGCGGACCGCTCTTTATTTGCAG AAGAATTCAATCTCATCGCCAGCTGTCAGGCCTGTCGATCAGAAACGGCGGGTTAAGGTGTTCCAGGAAGACCTT TCAACCAGAACTTGGTTGTCATCTTCTGACTCTACTGCTTTCTGCTCAACAATGAGGATTCTCGCTTCTATTGTG GCTTTCGCCGCTGTTCAACTTGCTGCTGCCGGTACCATTCAAAGGCGTGCATCCGTCAATGACGTTGCTAATCTT GGTTACGCAACTCTCAACGGAGGAACATCAGGTGGTTCAGGCGGGTCACAAACTACTGTGACTACTCTTGACCAA TTGACCAGCGCTGTCAGTGGCGACAGCAGAAAAATTGTCCTCATTTCTGGCCGCATCTCTGGTAGTGCTGTTGTT AGGGTAGGGTCCAACACTTCAATTCTTGGACAACCTGGATCCCTTCTTGACGGTGTTGGGCTCCGTGTTCTTGGG GAGAGCAATGTCATCATTCGCAACGTCAAGATCTCCAGGGTCGTTGCTGATGTCGGCGATGCCCTTGGCATTCAA GAAGCTCACCAAGTCTGGGTTGACCACGTTGACCTTTCCAGCGACAGGGACCACGACAAAGACTTCTACGACGGC CTTCTTGACATCACCCACGGATGCACGGGTATCACTGTCACGAACTCCAGGCTCCACGACCACTGGAAAGGCTCT CTCGTCGGTCATTCTGACAGTAACGGCAGCGAAGACACGCCTATGACCGTAACCTATGCCAACAATTGGTGGCAC AACCTCAACTCTCGTACCCCCTCTTTCCGGTTTGGTCATGGCCACATCTTCAACAATGTCTTCGACGCCAACGCC GATGGTATCAACACTCGTGATGGTGCTCAGCTGCTCGTTGAAAACAATGTTTGGACGAACCCTGCGAAGCAGAAG CCTCTCTATTCTACTGACGGAGGCTTCGCTGTTGCTCGTGGCAATGATTTCGGTGGAGGTGAAAACACGGCTCCG GCAGGCAACTTCAATAGCCCTCCCTACAGCTACAGTCTCCAATCCACGACTACCACGCGTAGCAATGTCCCTAAC ACAGCCGGCCAAAACTTGAGCTTCTGA |
Gene | >Agabi119p4|633100 ATGTTTAACTGGTTCCGTCTGAACTTCTCCCTGAGTCGGCCAAGTAAATACGTTTCTATTCGGCGAAGAATACCT AGTAAGTCTGAGATGTTCATACAAACGCGCTGCTTCTCGGAAAAATCTGATTTTTCCATGATACTCGTCTCCACA TGATAAAATTATCCTTCAAGCCACGTCACATTCTCACAGCAAGTGCCCTCATTGCTCACGGTGTTGTTTGTCCAC ACGCAATAGCCTTTTGTTCGTCGCGTATACAGACATATTGGAGAAGACCGCCAAGGGCCGGGCGGACCGCTCTTT ATTTGCAGAAGAATTCAATCTCATCGCCAGCTGTCAGGCCTGTCGATCAGAAACGGCGGGTGTCAGTGAGATCTG GGCTAATTACCTGGTGTGGAGGTCAGCTGGTGACGATCCTGATTTGAAAACTTTGCTATGGTCGTATGCTACTGA GTGGTATAAAAAGTAAGGTGTTCCAGGAAGACCTTTCAACCAGAACTTGGTTGTCATCTTCTGACTCTACTGCTT TCTGCTCAACAATGAGGATTCTCGCTTCTATTGTGGCTTTCGCCGCTGTTCAACTTGCTGCTGTATGTATATAAC CTTCATGTCTTGAATCTGGATGAACGCTGAATCTGCTTGCTTGTCAGGCCGGTACCATTCAAAGGCGTGCATCCG TCAATGACGTTGCTAATCTTGGTTACGCAACTCTCAACGGAGGGTATGTTTTTTGCACAGAGGATTGGATAGACT ACTGACCATAATTAAATTAGAACATCAGGTGGTTCAGGCGGGTCACAAACTACTGTGACTACTCTTGACCAATTG ACCAGCGCTGTCAGTGGCGACAGCAGAAAAATTGTCCTCATTTCTGGTATGGTCCTTTTTCTCTTTCTTGAAATC TATATATCCTTATTCATAACGTGGAGGCCGCATCTCTGGTAGTGCTGTTGTTAGGGTAGGGTCCAACACTTCAAT TCTTGGACAACCTGGATCCCGTACGTGCACATTGCTGTTTTCTCAAAGTGACATATGACAAATATTACTAGTTCT TGACGGTGTTGGGCTCCGTGTTCTTGGGGAGAGCAATGTCATCATTCGCAACGTCAAGATCTCCAGGGTCGTTGC TGATGTCGGCGATGCCCTTGGCATTCAAGAAGCTCACCAAGTCTGGGTTGACCACGTTGACCTTTCCAGCGACAG GGACCACGACAAAGACTTGTGGGTCAGACAAGCCGCTTCCAATTTCTTTAATTCAATTGTGTTTCCAGCTACGAC GGCCTTCTTGACATCACCCACGGATGCACGGGTATCACTGTCACGAACTCCAGGCTCCACGACCACTGGAAAGGC TCTCTCGTCGGTCATTCTGACAGTAACGGCAGCGAAGACACGCCTATGACCGTAACCTATGCCAACAATTGGTGG CACAACCTCAACTCTCGTACCCCCTCTTTCCGGTTTGGTCATGGCCACATCTTCAACAATGTCTTCGACGCCAAC GCCGATGGTATCAACACTCGTGATGGTGCTCAGCTGCTCGTTGAAAACAATGTTTGGACGAGTACGTTTCCTGAT TTTGCCACCGAAGCCCCAAGCTGATAAGGTTCCTTGTAGACCCTGCGAAGCAGAAGCCTCTCTATTCTACTGACG GAGGCTTCGCTGTTGCTCGTGGCAATGATTTCGGTGGAGGTGAAAACACGGCTCCGGCAGGCAACTTCAATAGCC CTCCCTACAGCTACAGTCTCCAATCCACGACTACCACGCGTAGCAATGTCCCTAACACAGCCGGCCAAAACTTGA GCTTCTGA |