Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|631700
Gene name
Locationscaffold_04:2851122..2852498
Strand+
Gene length (bp)1376
Transcript length (bp)894
Coding sequence length (bp)894
Protein length (aa) 298

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20152 DUF6534 Family of unknown function (DUF6534) 2.7E-15 124 216

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 44 66 22
3 79 98 19
4 118 140 22
5 161 183 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|631700
MRWLRNLVHVIFFLETAQTVMTVADGFHWFVYGFGSIKKLGEYFLANFDSPILCSIIALISQGVYCWRIYYLSRW
KIPTIIIGIAALTQTAGGIGIGIVNQRLGTIEEWDPKFNVLMILWSTGSAVADTLIASIMTYLLLSSRPFESRKK
RSTVMTKLIRLVIETNVASALVAVAVLLTTVITPIAPPKTSYFLCPGYVLGKLYSNSFITMLNNRRGTGNGGLDK
STGSNQSDNLVMERALQRNSQSYYRKPSHLPPITVAIQTETALRMDDVSEVTVPKSQYDDDTLPKPSDIRIP*
Coding >Agabi119p4|631700
ATGAGATGGCTTCGGAATCTCGTCCATGTTATATTCTTTTTGGAGACAGCGCAGACAGTCATGACGGTCGCGGAT
GGATTTCACTGGTTCGTTTATGGTTTTGGGAGCATTAAGAAGCTCGGGGAATATTTTCTGGCCAATTTCGATTCG
CCCATCCTATGCTCAATAATTGCCCTCATCTCTCAAGGGGTCTACTGTTGGAGGATATACTATTTGAGTCGTTGG
AAGATCCCCACGATAATTATCGGCATTGCTGCTCTAACGCAGACAGCTGGAGGAATCGGCATTGGCATTGTTAAC
CAGAGATTGGGTACCATCGAAGAATGGGACCCGAAGTTTAACGTCTTGATGATTCTTTGGTCCACTGGTAGTGCT
GTGGCGGATACTTTGATCGCTTCCATAATGACGTATCTGTTACTTTCATCCAGACCTTTTGAATCAAGAAAAAAG
AGATCGACAGTAATGACGAAGTTGATCAGATTGGTGATTGAGACAAACGTTGCCAGTGCTTTGGTTGCGGTGGCC
GTCTTACTCACGACAGTTATTACGCCTATTGCACCGCCGAAAACAAGCTATTTTCTTTGTCCGGGCTATGTTTTA
GGAAAGCTATATAGTAACTCTTTCATCACCATGTTGAACAACCGTCGAGGCACCGGTAATGGAGGGCTTGATAAA
TCCACAGGTAGCAATCAGAGTGATAATTTGGTGATGGAGAGGGCGCTGCAACGGAACAGCCAATCATACTATCGG
AAGCCCTCTCATCTCCCACCCATTACGGTGGCCATTCAGACAGAGACGGCCTTGAGGATGGATGATGTTTCAGAA
GTCACGGTCCCCAAGTCGCAATATGACGACGACACTCTACCAAAACCTAGCGATATTCGTATACCTTGA
Transcript >Agabi119p4|631700
ATGAGATGGCTTCGGAATCTCGTCCATGTTATATTCTTTTTGGAGACAGCGCAGACAGTCATGACGGTCGCGGAT
GGATTTCACTGGTTCGTTTATGGTTTTGGGAGCATTAAGAAGCTCGGGGAATATTTTCTGGCCAATTTCGATTCG
CCCATCCTATGCTCAATAATTGCCCTCATCTCTCAAGGGGTCTACTGTTGGAGGATATACTATTTGAGTCGTTGG
AAGATCCCCACGATAATTATCGGCATTGCTGCTCTAACGCAGACAGCTGGAGGAATCGGCATTGGCATTGTTAAC
CAGAGATTGGGTACCATCGAAGAATGGGACCCGAAGTTTAACGTCTTGATGATTCTTTGGTCCACTGGTAGTGCT
GTGGCGGATACTTTGATCGCTTCCATAATGACGTATCTGTTACTTTCATCCAGACCTTTTGAATCAAGAAAAAAG
AGATCGACAGTAATGACGAAGTTGATCAGATTGGTGATTGAGACAAACGTTGCCAGTGCTTTGGTTGCGGTGGCC
GTCTTACTCACGACAGTTATTACGCCTATTGCACCGCCGAAAACAAGCTATTTTCTTTGTCCGGGCTATGTTTTA
GGAAAGCTATATAGTAACTCTTTCATCACCATGTTGAACAACCGTCGAGGCACCGGTAATGGAGGGCTTGATAAA
TCCACAGGTAGCAATCAGAGTGATAATTTGGTGATGGAGAGGGCGCTGCAACGGAACAGCCAATCATACTATCGG
AAGCCCTCTCATCTCCCACCCATTACGGTGGCCATTCAGACAGAGACGGCCTTGAGGATGGATGATGTTTCAGAA
GTCACGGTCCCCAAGTCGCAATATGACGACGACACTCTACCAAAACCTAGCGATATTCGTATACCTTGA
Gene >Agabi119p4|631700
ATGAGATGGCTTCGGAATCTCGGTGAGGACGTTGTTCTGAGTTACCAAGTCTTGCAGATCTGACGAATGTCCATT
ATAGTCCATGTTATATTCTTTTTGGAGACAGCGCAGACAGTCATGACGGTCGCGGATGGATTTCACTGGTTCGTT
TATGGTTTTGGGAGCATTAAGAAGCTCGGGGAATATTTTCTGGCCAATTTCGATTCGCCCATCCTATGCTCAATA
ATTGCCCTCATCTCTCAAGGGGTCTACTGTTGGAGGATATACTATTTGAGTCGTTGGAAGATCCCCACGATAATT
ATCGGCATTGTACGTACCTCGCTTTTGTATCGCGCTGACTTGAATTTTAATCTGTTCCTTGAACAGGCTGCTCTA
ACGCAGACAGCTGGAGGAATCGGCATTGGCATTGTTGTCTGTCATCATATGTCCTTCTTTATCGGCTGCTCGCCC
TGACGTTTATCAGAACCAGAGATTGGGTACCATCGAAGAATGGGACCCGAAGTTTAACGTCTTGATGATTGTGAG
TCAGCATGATCAACTTGAAGTGGAAACCTGTTGACGGGGCATGGCATAGCTTTGGTCCACTGGTAGTGCTGTGGC
GGATACTTTGATCGCTTCCATAATGACGTATCTGGTGCGAGATGTCCACGGAAATCATTCATCGAGGACATTAGA
CTCATACCTGAGCAGTTACTTTCATCCAGACCTTTTGAATCAAGAAAAAAGAGATCGACAGTAATGACGAAGTTG
ATCAGATTGGTGATTGAGACAAACGTTGCCAGTGGTACGCTTACAGTAATGATTTCCTTCCGGCTTGATGATTAA
TTGAAGCCAAGCTTTGGTTGCGGTGGCCGTCTTACTCACGACAGTTATTACGCCTATTGCACCGCCGGTACGTTA
GCGTGATGCTATACCTATGATGATCAGTATTCATTTTTTTCCTCCAGAAAACAAGCTATTTTCTTTGTCCGTAAG
TCAACCGAAATCAATATTCTTCAACGATACTGAATATTTTCAATAGGGGCTATGTTTTAGGAAAGCTGTAAGTAG
AGTCACCGATCGAAAAACTGAAATCTTACATTCCTCATAGATATAGTAACTCTTTCATCACCATGTTGAACAACC
GTCGAGGCACCGGTAATGGAGGGCTTGATAAATCCACAGGTAGCAATCAGAGTGATAATTTGGTGATGGAGAGGG
CGCTGCAACGGAACAGCCAATCATACTATCGGAAGCCCTCTCATCTCCCACCCATTACGGTGGCCATTCAGACAG
AGACGGCCTTGAGGATGGATGATGTTTCAGAAGTCACGGTCCCCAAGTCGCAATATGACGACGACACTCTACCAA
AACCTAGCGATATTCGTATACCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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