Fungal Genomics

at Utrecht University

General Properties

Protein ID	Agabi119p4\|613050
Gene name
Location	scaffold_03b:855602..856733
Strand	+
Gene length (bp)	1131
Transcript length (bp)	897
Coding sequence length (bp)	897
Protein length (aa)	299

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13920	zf-C3HC4_3	Zinc finger, C3HC4 type (RING finger)	2.7E-06	4	44

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 21	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4\|613050 MGHLLCIICDKVDKPDEFLAQYCGHAFCKHCISQLSTCPKCRTEWGSRIPYRIFFDFPDTSVFSRLYTRLENMGE ETPSVVADKTSGIIRKFVEDSSLAHDASQAVALLEATERLEKRVIPLFSDLERMRKENSSLREQSAAYQLDIQSK EGLSAQIEEMYHTMAEQNQNILSISEELAREEKKRSSEEKANHRLVRLVRKKQEEIDIKEREIETLRSVVEARDK QLHLQKRKLRELAKRLKTTPVVQDVDDSLIVEPPLSDIVNDDTFQRPHKPEANSSSPPLNTLFSTHKRRKTET*
Coding	>Agabi119p4\|613050 ATGGGTCATCTCCTCTGCATTATCTGCGACAAAGTTGACAAACCAGATGAATTCTTAGCTCAATATTGTGGACAC GCCTTCTGCAAGCACTGCATATCTCAACTCAGCACTTGTCCAAAATGTCGCACCGAATGGGGGTCACGGATTCCT TACCGGATCTTTTTCGATTTTCCGGATACATCAGTCTTCAGCCGACTCTATACCCGCCTTGAAAACATGGGCGAA GAGACACCGTCTGTGGTAGCTGATAAGACAAGTGGCATCATCCGGAAGTTTGTTGAAGACTCAAGTTTAGCTCAC GATGCGTCTCAGGCTGTAGCACTCCTCGAGGCCACAGAACGCCTAGAGAAGCGTGTTATACCTTTATTCTCTGAT TTAGAACGCATGCGAAAGGAAAATTCATCACTACGCGAGCAATCAGCTGCCTATCAATTAGATATACAGTCAAAA GAAGGCCTGTCCGCACAAATAGAAGAAATGTATCACACAATGGCAGAACAGAATCAAAATATTCTTTCAATTAGC GAAGAACTTGCACGCGAGGAAAAGAAGAGAAGTTCAGAGGAGAAGGCTAATCATCGTCTTGTTCGTTTGGTCCGG AAAAAACAAGAGGAAATCGATATTAAGGAGCGGGAAATAGAAACCCTTAGATCTGTAGTCGAGGCACGCGACAAG CAGCTGCATTTGCAAAAGCGCAAACTGCGAGAACTGGCCAAACGTTTGAAGACCACTCCGGTAGTGCAGGATGTC GATGACTCCCTCATTGTTGAGCCACCGCTTTCGGATATTGTGAACGATGATACCTTTCAAAGGCCCCATAAACCC GAGGCAAACAGCTCCAGTCCACCTTTGAACACACTTTTCTCGACCCACAAACGACGGAAAACCGAAACATGA
Transcript	>Agabi119p4\|613050 ATGGGTCATCTCCTCTGCATTATCTGCGACAAAGTTGACAAACCAGATGAATTCTTAGCTCAATATTGTGGACAC GCCTTCTGCAAGCACTGCATATCTCAACTCAGCACTTGTCCAAAATGTCGCACCGAATGGGGGTCACGGATTCCT TACCGGATCTTTTTCGATTTTCCGGATACATCAGTCTTCAGCCGACTCTATACCCGCCTTGAAAACATGGGCGAA GAGACACCGTCTGTGGTAGCTGATAAGACAAGTGGCATCATCCGGAAGTTTGTTGAAGACTCAAGTTTAGCTCAC GATGCGTCTCAGGCTGTAGCACTCCTCGAGGCCACAGAACGCCTAGAGAAGCGTGTTATACCTTTATTCTCTGAT TTAGAACGCATGCGAAAGGAAAATTCATCACTACGCGAGCAATCAGCTGCCTATCAATTAGATATACAGTCAAAA GAAGGCCTGTCCGCACAAATAGAAGAAATGTATCACACAATGGCAGAACAGAATCAAAATATTCTTTCAATTAGC GAAGAACTTGCACGCGAGGAAAAGAAGAGAAGTTCAGAGGAGAAGGCTAATCATCGTCTTGTTCGTTTGGTCCGG AAAAAACAAGAGGAAATCGATATTAAGGAGCGGGAAATAGAAACCCTTAGATCTGTAGTCGAGGCACGCGACAAG CAGCTGCATTTGCAAAAGCGCAAACTGCGAGAACTGGCCAAACGTTTGAAGACCACTCCGGTAGTGCAGGATGTC GATGACTCCCTCATTGTTGAGCCACCGCTTTCGGATATTGTGAACGATGATACCTTTCAAAGGCCCCATAAACCC GAGGCAAACAGCTCCAGTCCACCTTTGAACACACTTTTCTCGACCCACAAACGACGGAAAACCGAAACATGA
Gene	>Agabi119p4\|613050 ATGGGTCATCTCCTCTGCATTATCTGCGACAAAGTTGACAAACCAGATGAATTCTTAGCTCAATATTGTGGTGCA ATTTTATCTTTGTGACTAAGTTTTCGGGCTTTACTAAAGGAGAAACTATGGTCAGGACACGCCTTCTGCAAGCAC TGCATATCTCAACTCAGCACTTGTCCAAAATGTCGCACCGAATGGGGGTCACGGATTCCTTACCGGATCTTTTTC GATTTTCCGGATACATCAGTCTTCAGCCGACTCTATACCCGCCTTGAAAACATGGGCGAAGAGACACCGTCTGTG GTAGCTGATAAGACAAGTGGCATCATCCGGAAGTTTGTTGAAGACTCAAGTTTAGCTCACGATGCGTCTCAGGCT GTACGTCCTCACATGCGCTTTTGTTGAATGTGCCTTCAACTATCGGTATTGAAGTCATCTACGCAGGTAGCACTC CTCGAGGCCACAGAACGCCTAGAGAAGCGTGTTATACCTTTATTCTCTGATTTAGAACGCATGCGAAAGGAAAAT TCATCACTACGCGAGCAATCAGCTGCCTATCAATTAGATATACAGTCAAAAGAAGGCCTGTCCGCACAAATAGAA GAAATGTATCACACAATGGCAGAACAGAATCAAAATATTCTTTCAATTAGCGAAGAACTTGCACGCGAGGAAAAG AAGAGAAGTTCAGAGGAGAAGGCTAATCATCGTCTTGTTCGTTTGGTCCGGAAAAAACAAGAGGAAATCGATATT AAGGAGCGGGAAATAGAAACCCTTAGATCTGTAGTCGAGGCACGCGACAAGCAGGTTTGCATAATATACCATGTT CGTTATCTGGCTATTGACGTATTTGTTTCGCAGCTGCATTTGCAAAAGCGCAAACTGCGAGAACTGGCCAAACGT TTGAAGACCACTCCGGTAGTGCAGGATGTCGATGACTCCCTCATTGTTGAGCCACCGCTTTCGGTCAGTGACCCC TCCCTTATCACATGAAAACATTCTCTCATTCGAAGTTCAAAGGATATTGTGAACGATGATACCTTTCAAAGGCCC CATAAACCCGAGGCAAACAGCTCCAGTCCACCTTTGAACACACTTTTCTCGACCCACAAACGACGGAAAACCGAA ACATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail