© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|611550 |
| Gene name | |
| Location | scaffold_03b:649646..650508 |
| Strand | - |
| Gene length (bp) | 862 |
| Transcript length (bp) | 699 |
| Coding sequence length (bp) | 699 |
| Protein length (aa) | 233 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13489 | Methyltransf_23 | Methyltransferase domain | 1.9E-15 | 51 | 206 |
| PF13649 | Methyltransf_25 | Methyltransferase domain | 2.1E-12 | 68 | 159 |
| PF08241 | Methyltransf_11 | Methyltransferase domain | 2.3E-12 | 69 | 163 |
| PF13847 | Methyltransf_31 | Methyltransferase domain | 8.0E-12 | 63 | 169 |
| PF08242 | Methyltransf_12 | Methyltransferase domain | 1.9E-09 | 68 | 161 |
| PF05175 | MTS | Methyltransferase small domain | 2.7E-06 | 60 | 170 |
| PF06325 | PrmA | Ribosomal protein L11 methyltransferase (PrmA) | 6.3E-05 | 54 | 164 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O94628|YGE9_SCHPO | Uncharacterized methyltransferase C1347.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1347.09 PE=3 SV=1 | 68 | 167 | 4.0E-18 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008168 | methyltransferase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0016740 | transferase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0016741 | transferase activity, transferring one-carbon groups | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 25 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|611550 MSLHSHSHHLHQHHSHGHVTAAQANKDFFDDPEHAQENFPHVEDLAARVAKGIIKNYDKLEKEKTVAMDFACGNG FVSKGLMPFVKSILGVDISPVVVEKYNANFKDEDASAVCMELKGEKDELENARFDLIFCTASYHHLASYEEMTRI LTSFLKPGGDLIVVDMLHLEGLQHFSAAALEHAVPHKHGLSKDDIQRAYDGAGLTMKSFNLLPPAEYEFPSIFIA IGEKPYV* |
| Coding | >Agabi119p4|611550 ATGTCTTTGCACTCTCATTCTCATCACCTCCACCAACACCACAGTCACGGTCATGTTACTGCTGCTCAGGCTAAC AAAGATTTCTTTGACGATCCAGAACATGCTCAAGAAAACTTCCCTCATGTCGAGGACCTTGCGGCAAGGGTCGCC AAAGGTATCATTAAGAATTATGACAAACTTGAAAAGGAAAAGACCGTTGCGATGGATTTTGCTTGTGGCAATGGA TTTGTTTCCAAAGGATTGATGCCATTTGTGAAGTCAATCTTGGGTGTCGACATCAGTCCAGTCGTTGTGGAGAAA TACAATGCTAACTTCAAGGACGAGGACGCCTCTGCTGTCTGTATGGAACTCAAGGGAGAGAAAGACGAACTCGAG AATGCTCGGTTTGACCTCATTTTTTGTACTGCTTCATATCACCATCTGGCGTCCTACGAAGAAATGACTCGCATC TTGACATCCTTCCTTAAACCCGGAGGTGACCTCATTGTAGTGGATATGTTACACTTGGAAGGCTTACAACATTTC TCGGCTGCTGCCCTCGAACACGCAGTTCCCCATAAGCATGGATTGTCAAAGGACGACATACAGAGAGCGTACGAT GGAGCAGGCTTGACGATGAAATCCTTCAACCTATTACCTCCTGCTGAATACGAGTTTCCTAGTATCTTCATCGCC ATCGGAGAGAAACCCTATGTGTAG |
| Transcript | >Agabi119p4|611550 ATGTCTTTGCACTCTCATTCTCATCACCTCCACCAACACCACAGTCACGGTCATGTTACTGCTGCTCAGGCTAAC AAAGATTTCTTTGACGATCCAGAACATGCTCAAGAAAACTTCCCTCATGTCGAGGACCTTGCGGCAAGGGTCGCC AAAGGTATCATTAAGAATTATGACAAACTTGAAAAGGAAAAGACCGTTGCGATGGATTTTGCTTGTGGCAATGGA TTTGTTTCCAAAGGATTGATGCCATTTGTGAAGTCAATCTTGGGTGTCGACATCAGTCCAGTCGTTGTGGAGAAA TACAATGCTAACTTCAAGGACGAGGACGCCTCTGCTGTCTGTATGGAACTCAAGGGAGAGAAAGACGAACTCGAG AATGCTCGGTTTGACCTCATTTTTTGTACTGCTTCATATCACCATCTGGCGTCCTACGAAGAAATGACTCGCATC TTGACATCCTTCCTTAAACCCGGAGGTGACCTCATTGTAGTGGATATGTTACACTTGGAAGGCTTACAACATTTC TCGGCTGCTGCCCTCGAACACGCAGTTCCCCATAAGCATGGATTGTCAAAGGACGACATACAGAGAGCGTACGAT GGAGCAGGCTTGACGATGAAATCCTTCAACCTATTACCTCCTGCTGAATACGAGTTTCCTAGTATCTTCATCGCC ATCGGAGAGAAACCCTATGTGTAG |
| Gene | >Agabi119p4|611550 ATGTCTTTGCACTCTCATTCTCATCACCTCCACCAACACCACAGTCACGGTCATGTTACTGCTGCTCAGGCTAAC AAAGATTTCTTTGACGATCCAGAACATGCTCAAGAAAACTTCCCTCATGTCGAGGACCTTGCGGCAAGGTGCGTA CAGTGTCTTCTTTCAGAAATCAACCAAGGCGCTGATTGTCATATTAGGGTCGCCAAAGGTATCATTAAGAATTAT GACAAACTTGAAAAGGAAAAGACCGTTGCGATGGATTTTGCTTGTGGCAATGGTATGTAATGATCATTTACCTTG GAGTGCAGGATATGGATACTCACGACGCAATAGGATTTGTTTCCAAAGGATTGATGCCATTTGTGAAGTCAATCT TGGGTGTCGACATCAGTCCAGTCGTTGTGGAGAAATACAATGCTAACTTCAAGGACGAGGACGCCTCTGCTGTCT GTATGGAACTCAAGGGAGAGAAAGACGAACTCGAGAATGCTCGGTTTGACCTCATTTTTGTAAGTCATTCGTTGT CAAACTGCGTAAGCCAGCTAATGTGATTATGATGCAGTGTACTGCTTCATATCACCATCTGGCGTCCTACGAAGA AATGACTCGCATCTTGACATCCTTCCTTAAACCCGGAGGTGACCTCATTGTAGTGGATATGTTACACTTGGAAGG CTTACAACATTTCTCGGCTGCTGCCCTCGAACACGCAGTTCCCCATAAGCATGGATTGTCAAAGGACGACATACA GAGAGCGTACGATGGAGCAGGCTTGACGATGAAATCCTTCAACCTATTACCTCCTGCTGAATACGAGTTTCCTAG TATCTTCATCGCCATCGGAGAGAAACCCTATGTGTAG |