© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Agabi119p4|611450 |
| Gene name | |
| Location | scaffold_03b:600636..601498 |
| Strand | - |
| Gene length (bp) | 862 |
| Transcript length (bp) | 810 |
| Coding sequence length (bp) | 810 |
| Protein length (aa) | 270 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13649 | Methyltransf_25 | Methyltransferase domain | 1.7E-11 | 27 | 121 |
| PF08241 | Methyltransf_11 | Methyltransferase domain | 1.3E-08 | 28 | 123 |
| PF13489 | Methyltransf_23 | Methyltransferase domain | 2.9E-07 | 10 | 123 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008168 | methyltransferase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0016740 | transferase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0016741 | transferase activity, transferring one-carbon groups | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 22 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|611450 MQHELFLRILDQKIIHAPVELQDDDWVLETATGTGIWLQDMAKVTSTKPQYIGIDIESNFFPRASTLPVNIRFET QSVLDLPMKWTNKFTLVHQRLLISGLRRHEWEPAVRELYRVVKPGGWIQMFEMRIWTAGPALAKYWDLLCKFGDD AGLMFRDLAIKLPDFLKQSGFVDIHEDTFGTPLGAWANRDGVDGKDDILGILQGFKTPILRGGGYGVVGSEAEYD GLIEEIEKEVDVTYGSTALWTTFWARKPSANEWSRTNHQNVSEY* |
| Coding | >Agabi119p4|611450 ATGCAGCATGAATTATTTCTACGGATTCTCGACCAGAAGATCATTCATGCGCCGGTTGAGCTACAAGACGATGAT TGGGTCTTGGAAACAGCTACTGGTACAGGTATCTGGCTTCAAGACATGGCTAAAGTAACATCCACGAAACCACAA TACATCGGCATAGATATCGAATCGAATTTCTTCCCACGAGCATCGACCCTCCCCGTGAACATCAGATTCGAGACC CAATCCGTCCTCGATCTTCCTATGAAATGGACAAACAAGTTCACACTGGTTCATCAGCGTCTCCTCATCTCGGGT CTCCGCAGACATGAATGGGAACCAGCTGTCAGAGAGTTATATCGGGTTGTCAAACCAGGTGGATGGATTCAAATG TTCGAAATGCGAATATGGACTGCTGGTCCAGCCCTTGCCAAATATTGGGATTTGCTTTGCAAGTTCGGGGACGAT GCAGGGTTGATGTTTCGCGACCTCGCCATCAAACTACCGGATTTTCTCAAGCAAAGTGGCTTTGTTGATATTCAT GAGGACACTTTTGGTACCCCTCTTGGTGCTTGGGCAAACCGGGACGGCGTTGATGGTAAAGACGATATTTTGGGT ATTTTGCAAGGATTCAAGACACCAATTCTGAGAGGAGGCGGATATGGTGTAGTGGGAAGTGAAGCGGAATACGAT GGACTAATAGAGGAGATTGAGAAGGAAGTGGATGTGACGTATGGATCGACGGCTTTGTGGACAACGTTCTGGGCA CGAAAACCATCTGCAAATGAGTGGAGTCGTACTAATCATCAAAATGTATCTGAATATTAG |
| Transcript | >Agabi119p4|611450 ATGCAGCATGAATTATTTCTACGGATTCTCGACCAGAAGATCATTCATGCGCCGGTTGAGCTACAAGACGATGAT TGGGTCTTGGAAACAGCTACTGGTACAGGTATCTGGCTTCAAGACATGGCTAAAGTAACATCCACGAAACCACAA TACATCGGCATAGATATCGAATCGAATTTCTTCCCACGAGCATCGACCCTCCCCGTGAACATCAGATTCGAGACC CAATCCGTCCTCGATCTTCCTATGAAATGGACAAACAAGTTCACACTGGTTCATCAGCGTCTCCTCATCTCGGGT CTCCGCAGACATGAATGGGAACCAGCTGTCAGAGAGTTATATCGGGTTGTCAAACCAGGTGGATGGATTCAAATG TTCGAAATGCGAATATGGACTGCTGGTCCAGCCCTTGCCAAATATTGGGATTTGCTTTGCAAGTTCGGGGACGAT GCAGGGTTGATGTTTCGCGACCTCGCCATCAAACTACCGGATTTTCTCAAGCAAAGTGGCTTTGTTGATATTCAT GAGGACACTTTTGGTACCCCTCTTGGTGCTTGGGCAAACCGGGACGGCGTTGATGGTAAAGACGATATTTTGGGT ATTTTGCAAGGATTCAAGACACCAATTCTGAGAGGAGGCGGATATGGTGTAGTGGGAAGTGAAGCGGAATACGAT GGACTAATAGAGGAGATTGAGAAGGAAGTGGATGTGACGTATGGATCGACGGCTTTGTGGACAACGTTCTGGGCA CGAAAACCATCTGCAAATGAGTGGAGTCGTACTAATCATCAAAATGTATCTGAATATTAG |
| Gene | >Agabi119p4|611450 ATGCAGCATGAATTATTTCTACGGATTCTCGACCAGAAGATCATTCATGCGCCGGTTGAGCTACAAGACGATGAT TGGGTCTTGGAAACAGCTACTGGTACAGGTATTTGCTTTTTTGAATTGGAAGAGGCAGATTGATCAATAGGCTTC GTAAGGTATCTGGCTTCAAGACATGGCTAAAGTAACATCCACGAAACCACAATACATCGGCATAGATATCGAATC GAATTTCTTCCCACGAGCATCGACCCTCCCCGTGAACATCAGATTCGAGACCCAATCCGTCCTCGATCTTCCTAT GAAATGGACAAACAAGTTCACACTGGTTCATCAGCGTCTCCTCATCTCGGGTCTCCGCAGACATGAATGGGAACC AGCTGTCAGAGAGTTATATCGGGTTGTCAAACCAGGTGGATGGATTCAAATGTTCGAAATGCGAATATGGACTGC TGGTCCAGCCCTTGCCAAATATTGGGATTTGCTTTGCAAGTTCGGGGACGATGCAGGGTTGATGTTTCGCGACCT CGCCATCAAACTACCGGATTTTCTCAAGCAAAGTGGCTTTGTTGATATTCATGAGGACACTTTTGGTACCCCTCT TGGTGCTTGGGCAAACCGGGACGGCGTTGATGGTAAAGACGATATTTTGGGTATTTTGCAAGGATTCAAGACACC AATTCTGAGAGGAGGCGGATATGGTGTAGTGGGAAGTGAAGCGGAATACGATGGACTAATAGAGGAGATTGAGAA GGAAGTGGATGTGACGTATGGATCGACGGCTTTGTGGACAACGTTCTGGGCACGAAAACCATCTGCAAATGAGTG GAGTCGTACTAATCATCAAAATGTATCTGAATATTAG |