Protein ID | Agabi119p4|611100 |
Gene name | |
Location | scaffold_03b:553835..555013 |
Strand | + |
Gene length (bp) | 1178 |
Transcript length (bp) | 921 |
Coding sequence length (bp) | 921 |
Protein length (aa) | 307 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00352 | TBP | Transcription factor TFIID (or TATA-binding protein, TBP) | 1.5E-32 | 131 | 212 |
PF00352 | TBP | Transcription factor TFIID (or TATA-binding protein, TBP) | 2.0E-31 | 220 | 302 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P17871|TBP_SCHPO | TATA-box-binding protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tbp1 PE=3 SV=1 | 125 | 305 | 2.0E-117 |
sp|Q12731|TBP_EMENI | TATA-box-binding protein OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=tbpA PE=2 SV=1 | 55 | 305 | 1.0E-114 |
sp|P13393|TBP_YEAST | TATA-box-binding protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SPT15 PE=1 SV=3 | 120 | 305 | 2.0E-114 |
sp|O43133|TBP_CANAL | TATA-box-binding protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=TBP1 PE=2 SV=1 | 130 | 305 | 2.0E-112 |
sp|P93348|TBP_TOBAC | TATA-box-binding protein OS=Nicotiana tabacum PE=2 SV=1 | 128 | 305 | 2.0E-110 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P17871|TBP_SCHPO | TATA-box-binding protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tbp1 PE=3 SV=1 | 125 | 305 | 2.0E-117 |
sp|Q12731|TBP_EMENI | TATA-box-binding protein OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=tbpA PE=2 SV=1 | 55 | 305 | 1.0E-114 |
sp|P13393|TBP_YEAST | TATA-box-binding protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SPT15 PE=1 SV=3 | 120 | 305 | 2.0E-114 |
sp|O43133|TBP_CANAL | TATA-box-binding protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=TBP1 PE=2 SV=1 | 130 | 305 | 2.0E-112 |
sp|P93348|TBP_TOBAC | TATA-box-binding protein OS=Nicotiana tabacum PE=2 SV=1 | 128 | 305 | 2.0E-110 |
sp|Q42808|TBP_SOYBN | TATA-box-binding protein OS=Glycine max GN=TBP1 PE=2 SV=1 | 111 | 305 | 3.0E-110 |
sp|P50158|TBP1_MAIZE | TATA-box-binding protein 1 OS=Zea mays GN=TBP1 PE=2 SV=1 | 128 | 305 | 3.0E-109 |
sp|P48511|TBP_MESCR | TATA-box-binding protein OS=Mesembryanthemum crystallinum PE=2 SV=1 | 128 | 305 | 3.0E-109 |
sp|P50159|TBP2_MAIZE | TATA-box-binding protein 2 OS=Zea mays GN=TBP2 PE=2 SV=1 | 128 | 305 | 4.0E-109 |
sp|P53361|TBP_SPOFR | TATA-box-binding protein OS=Spodoptera frugiperda GN=Tbp PE=2 SV=1 | 82 | 305 | 2.0E-108 |
sp|Q8W0W4|TBP2_ORYSJ | TATA-binding protein 2 OS=Oryza sativa subsp. japonica GN=TBP2 PE=1 SV=2 | 128 | 305 | 2.0E-108 |
sp|Q02879|TBP2_WHEAT | TATA-box-binding protein 2 OS=Triticum aestivum GN=TBP2 PE=2 SV=1 | 111 | 305 | 5.0E-108 |
sp|P26357|TBP_SOLTU | TATA-box-binding protein OS=Solanum tuberosum GN=TBP PE=2 SV=1 | 111 | 305 | 9.0E-108 |
sp|O45211|TBP_BOMMO | TATA-box-binding protein OS=Bombyx mori GN=Tbp PE=2 SV=1 | 82 | 305 | 3.0E-107 |
sp|P26356|TBP1_WHEAT | TATA-box-binding protein 1 OS=Triticum aestivum GN=TBP1 PE=2 SV=1 | 128 | 305 | 8.0E-107 |
sp|P91809|TBP_STRPU | TATA-box-binding protein OS=Strongylocentrotus purpuratus PE=2 SV=1 | 110 | 305 | 1.0E-106 |
sp|P28148|TBP2_ARATH | TATA-box-binding protein 2 OS=Arabidopsis thaliana GN=TBP2 PE=1 SV=1 | 128 | 305 | 4.0E-106 |
sp|P28147|TBP1_ARATH | TATA-box-binding protein 1 OS=Arabidopsis thaliana GN=TBP1 PE=1 SV=1 | 128 | 305 | 5.0E-106 |
sp|P26354|TBP_ACACA | TATA-box-binding protein OS=Acanthamoeba castellanii GN=TFIID PE=2 SV=1 | 128 | 305 | 1.0E-105 |
sp|O17488|TBP_ARTSF | TATA-box-binding protein OS=Artemia franciscana PE=2 SV=1 | 84 | 305 | 1.0E-105 |
sp|Q7SXL3|TBP_DANRE | TATA-box-binding protein OS=Danio rerio GN=tbp PE=1 SV=1 | 26 | 305 | 2.0E-103 |
sp|Q92117|TBP_PROFL | TATA-box-binding protein OS=Protobothrops flavoviridis GN=TBP PE=3 SV=1 | 100 | 305 | 1.0E-102 |
sp|Q92146|TBP_TRIGA | TATA-box-binding protein OS=Trimeresurus gramineus GN=TBP PE=3 SV=1 | 100 | 305 | 1.0E-102 |
sp|O13270|TBP_CHICK | TATA-box-binding protein OS=Gallus gallus GN=TBP PE=2 SV=1 | 100 | 305 | 2.0E-102 |
sp|P53360|TBP_MESAU | TATA-box-binding protein OS=Mesocricetus auratus GN=TBP PE=2 SV=1 | 100 | 305 | 2.0E-102 |
sp|P29037|TBP_MOUSE | TATA-box-binding protein OS=Mus musculus GN=Tbp PE=1 SV=1 | 100 | 305 | 2.0E-102 |
sp|P20227|TBP_DROME | TATA-box-binding protein OS=Drosophila melanogaster GN=Tbp PE=1 SV=1 | 124 | 305 | 3.0E-102 |
sp|Q28GG8|TBP_XENTR | TATA-box-binding protein OS=Xenopus tropicalis GN=tbp PE=2 SV=1 | 100 | 305 | 3.0E-102 |
sp|Q2HJ52|TBP_BOVIN | TATA-box-binding protein OS=Bos taurus GN=TBP PE=2 SV=1 | 100 | 305 | 6.0E-102 |
sp|Q4R4F5|TBP_MACFA | TATA-box-binding protein OS=Macaca fascicularis GN=TBP PE=2 SV=1 | 100 | 305 | 6.0E-102 |
sp|P27633|TBP_XENLA | TATA-box-binding protein OS=Xenopus laevis GN=tbp PE=1 SV=1 | 100 | 305 | 7.0E-102 |
sp|P20226|TBP_HUMAN | TATA-box-binding protein OS=Homo sapiens GN=TBP PE=1 SV=2 | 100 | 305 | 9.0E-102 |
sp|A6H907|TBPL2_PANTR | TATA box-binding protein-like protein 2 OS=Pan troglodytes GN=TBPL2 PE=2 SV=1 | 123 | 305 | 4.0E-101 |
sp|Q5UE94|TBPL2_XENLA | TATA box-binding protein-like protein 2 OS=Xenopus laevis GN=tbpl2 PE=2 SV=1 | 128 | 305 | 2.0E-100 |
sp|P46272|TBP_ACEPE | TATA-box-binding protein OS=Acetabularia peniculus PE=2 SV=1 | 128 | 305 | 2.0E-100 |
sp|Q28DH2|TBPL2_XENTR | TATA box-binding protein-like protein 2 OS=Xenopus tropicalis GN=tbpl2 PE=2 SV=1 | 128 | 305 | 6.0E-100 |
sp|Q6SJ96|TBPL2_HUMAN | TATA box-binding protein-like protein 2 OS=Homo sapiens GN=TBPL2 PE=2 SV=1 | 123 | 305 | 9.0E-99 |
sp|Q1JPY4|TBPL2_DANRE | TATA box-binding protein-like protein 2 OS=Danio rerio GN=tbpl2 PE=1 SV=1 | 128 | 305 | 1.0E-98 |
sp|Q6SJ94|TBPL2_TAKRU | TATA box-binding protein-like protein 2 OS=Takifugu rubripes GN=tbpl2 PE=2 SV=1 | 123 | 305 | 3.0E-96 |
sp|P26355|TBP_DICDI | TATA-box-binding protein OS=Dictyostelium discoideum GN=tbpA PE=2 SV=2 | 128 | 305 | 4.0E-96 |
sp|P32085|TBP_CAEEL | TATA-box-binding protein OS=Caenorhabditis elegans GN=tbp-1 PE=2 SV=1 | 100 | 305 | 4.0E-95 |
sp|Q9NHP5|TBP_DROVI | TATA-box-binding protein OS=Drosophila virilis GN=Tbp PE=3 SV=1 | 124 | 305 | 4.0E-95 |
sp|A6H909|TBPL2_RAT | TATA box-binding protein-like protein 2 OS=Rattus norvegicus GN=Tbpl2 PE=2 SV=1 | 123 | 305 | 4.0E-93 |
sp|Q6SJ95|TBPL2_MOUSE | TATA box-binding protein-like protein 2 OS=Mus musculus GN=Tbpl2 PE=1 SV=1 | 109 | 305 | 2.0E-90 |
sp|Q27850|TBP_TETTH | TATA-box-binding protein OS=Tetrahymena thermophila PE=3 SV=1 | 117 | 305 | 1.0E-85 |
sp|Q27896|TRF_DROME | TBP-related factor OS=Drosophila melanogaster GN=Trf PE=2 SV=1 | 80 | 305 | 7.0E-73 |
sp|A7UFC2|TBPL1_ENTHI | TATA-box-binding protein-like protein 1 OS=Entamoeba histolytica GN=trf1 PE=3 SV=1 | 131 | 302 | 1.0E-70 |
sp|C4M7H7|TBP2_ENTHI | TATA-box-binding protein 2 OS=Entamoeba histolytica GN=EHI_112050 PE=3 SV=1 | 131 | 305 | 4.0E-56 |
sp|P52653|TBP1_ENTHI | TATA-box-binding protein 1 OS=Entamoeba histolytica GN=TBP PE=3 SV=2 | 131 | 305 | 8.0E-56 |
sp|P32086|TBP_PLAFA | TATA-box-binding protein OS=Plasmodium falciparum GN=TBP PE=3 SV=1 | 127 | 304 | 5.0E-44 |
sp|P58177|TBP_PYROC | TATA-box-binding protein OS=Pyrodictium occultum GN=tbp PE=3 SV=1 | 132 | 304 | 3.0E-43 |
sp|Q8ZVR0|TBP_PYRAE | TATA-box-binding protein OS=Pyrobaculum aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=tbp PE=3 SV=1 | 133 | 303 | 4.0E-42 |
sp|A3MV36|TBP_PYRCJ | TATA-box-binding protein OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=tbp PE=3 SV=1 | 133 | 303 | 3.0E-41 |
sp|B1Y949|TBP_PYRNV | TATA-box-binding protein OS=Pyrobaculum neutrophilum (strain DSM 2338 / JCM 9278 / V24Sta) GN=tbp PE=3 SV=1 | 133 | 303 | 5.0E-41 |
sp|A1RSQ1|TBP_PYRIL | TATA-box-binding protein OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189 / GEO3) GN=tbp PE=3 SV=1 | 133 | 303 | 2.0E-40 |
sp|Q971V3|TBP_SULTO | TATA-box-binding protein OS=Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) GN=tbp PE=3 SV=2 | 130 | 303 | 4.0E-40 |
sp|Q9UWN7|TBP_SULAC | TATA-box-binding protein OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=tbp PE=1 SV=1 | 130 | 303 | 6.0E-40 |
sp|Q55031|TBP_SULSH | TATA-box-binding protein OS=Sulfolobus shibatae GN=tbp PE=1 SV=2 | 130 | 303 | 3.0E-37 |
sp|P58178|TBP_SULSO | TATA-box-binding protein OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=tbp PE=3 SV=1 | 130 | 303 | 5.0E-37 |
sp|Q9YAT1|TBP_AERPE | TATA-box-binding protein OS=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=tbp PE=3 SV=3 | 124 | 302 | 2.0E-36 |
sp|Q5U385|TBPL1_DANRE | TATA box-binding protein-like protein 1 OS=Danio rerio GN=tbpl1 PE=2 SV=1 | 135 | 305 | 2.0E-35 |
sp|O27664|TBP_METTH | TATA-box-binding protein OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=tbp PE=3 SV=1 | 133 | 288 | 2.0E-35 |
sp|O29874|TBP_ARCFU | TATA-box-binding protein OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=tbp PE=3 SV=1 | 133 | 296 | 2.0E-35 |
sp|A6VIP7|TBP_METM7 | TATA-box-binding protein OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=tbp PE=3 SV=1 | 135 | 305 | 3.0E-35 |
sp|Q6DIY4|TBPL1_XENTR | TATA box-binding protein-like protein 1 OS=Xenopus tropicalis GN=tbpl1 PE=2 SV=1 | 133 | 305 | 5.0E-35 |
sp|Q5V470|TBP_HALMA | TATA-box-binding protein OS=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=tbp PE=3 SV=1 | 133 | 303 | 7.0E-35 |
sp|Q9W6Z2|TBPL1_XENLA | TATA box-binding protein-like protein 1 OS=Xenopus laevis GN=tbpl1 PE=2 SV=1 | 133 | 305 | 9.0E-35 |
sp|Q9P9I9|TBP_METTL | TATA-box-binding protein OS=Methanothermococcus thermolithotrophicus GN=tbp PE=3 SV=1 | 135 | 305 | 1.0E-34 |
sp|A5UL47|TBP_METS3 | TATA-box-binding protein OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=tbp PE=3 SV=1 | 133 | 303 | 2.0E-34 |
sp|A0B5H8|TBP_METTP | TATA-box-binding protein OS=Methanosaeta thermophila (strain DSM 6194 / JCM 14653 / NBRC 101360 / PT) GN=tbp PE=3 SV=1 | 132 | 288 | 2.0E-34 |
sp|A6UTF6|TBP_META3 | TATA-box-binding protein OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=tbp PE=3 SV=1 | 135 | 305 | 2.0E-33 |
sp|C6A0R1|TBP_THESM | TATA-box-binding protein OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=tbp PE=3 SV=1 | 133 | 296 | 2.0E-33 |
sp|Q5R7U8|TBPL1_PONAB | TATA box-binding protein-like protein 1 OS=Pongo abelii GN=TBPL1 PE=2 SV=1 | 133 | 305 | 3.0E-33 |
sp|P62340|TBPL1_MOUSE | TATA box-binding protein-like protein 1 OS=Mus musculus GN=Tbpl1 PE=1 SV=1 | 133 | 305 | 4.0E-33 |
sp|Q4R848|TBPL1_MACFA | TATA box-binding protein-like protein 1 OS=Macaca fascicularis GN=TBPL1 PE=2 SV=1 | 133 | 305 | 4.0E-33 |
sp|P62380|TBPL1_HUMAN | TATA box-binding protein-like protein 1 OS=Homo sapiens GN=TBPL1 PE=1 SV=1 | 133 | 305 | 4.0E-33 |
sp|Q32LB1|TBPL1_BOVIN | TATA box-binding protein-like protein 1 OS=Bos taurus GN=TBPL1 PE=2 SV=1 | 133 | 305 | 4.0E-33 |
sp|Q56253|TBP_THECE | TATA-box-binding protein OS=Thermococcus celer GN=tbp PE=3 SV=1 | 133 | 305 | 5.0E-33 |
sp|Q9YGV8|TBPL1_CHICK | TATA box-binding protein-like protein 1 OS=Gallus gallus GN=TBPL1 PE=2 SV=1 | 133 | 305 | 5.0E-33 |
sp|D4H071|TBP2_HALVD | TATA-box-binding protein 2 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=tbp2 PE=1 SV=1 | 133 | 296 | 7.0E-33 |
sp|Q6M0L3|TBP_METMP | TATA-box-binding protein OS=Methanococcus maripaludis (strain S2 / LL) GN=tbp PE=3 SV=1 | 135 | 305 | 9.0E-33 |
sp|B6YXI6|TBP_THEON | TATA-box-binding protein OS=Thermococcus onnurineus (strain NA1) GN=tbp PE=3 SV=1 | 133 | 292 | 1.0E-32 |
sp|Q52366|TBP_THEKO | TATA-box-binding protein OS=Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) GN=tbp PE=3 SV=1 | 133 | 292 | 1.0E-32 |
sp|Q9HN56|TBPE_HALSA | TATA-box-binding protein E OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) GN=tbpE PE=3 SV=1 | 132 | 303 | 1.0E-32 |
sp|A6URP5|TBP_METVS | TATA-box-binding protein OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=tbp PE=3 SV=1 | 135 | 305 | 2.0E-32 |
sp|Q57930|TBP_METJA | TATA-box-binding protein OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=tbp PE=1 SV=1 | 135 | 305 | 4.0E-32 |
sp|Q2NFC3|TBP_METST | TATA-box-binding protein OS=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) GN=tbp PE=3 SV=1 | 133 | 284 | 5.0E-32 |
sp|O58737|TBP_PYRHO | TATA-box-binding protein OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=tbp PE=3 SV=1 | 133 | 292 | 8.0E-32 |
sp|A9A840|TBP_METM6 | TATA-box-binding protein OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=tbp PE=3 SV=1 | 135 | 305 | 1.0E-31 |
sp|Q3ITB1|TBP_NATPD | TATA-box-binding protein OS=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) GN=tbp PE=3 SV=1 | 132 | 303 | 1.0E-31 |
sp|Q6L1R1|TBP_PICTO | TATA-box-binding protein OS=Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=tbp PE=3 SV=1 | 132 | 292 | 2.0E-31 |
sp|Q9V024|TBP_PYRAB | TATA-box-binding protein OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=tbp PE=3 SV=1 | 133 | 292 | 3.0E-31 |
sp|Q978J5|TBP_THEVO | TATA-box-binding protein OS=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=tbp PE=3 SV=1 | 132 | 292 | 4.0E-31 |
sp|Q8TTZ7|TBP3_METAC | TATA-box-binding protein 3 OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=tbp3 PE=3 SV=1 | 132 | 288 | 4.0E-31 |
sp|D4GZA2|TBP1_HALVD | TATA-box-binding protein 1 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=tbp1 PE=3 SV=1 | 132 | 303 | 4.0E-31 |
sp|Q9HLM8|TBP_THEAC | TATA-box-binding protein OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=tbp PE=3 SV=1 | 132 | 292 | 9.0E-31 |
sp|P62001|TBP_PYRWO | TATA-box-binding protein OS=Pyrococcus woesei GN=tbp PE=1 SV=1 | 133 | 300 | 1.0E-30 |
sp|P62000|TBP_PYRFU | TATA-box-binding protein OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=tbp PE=3 SV=1 | 133 | 300 | 1.0E-30 |
sp|O52018|TBPD_HALSA | TATA-box-binding protein D OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) GN=tbpD PE=3 SV=1 | 133 | 303 | 2.0E-30 |
sp|Q48325|TBPB_HALSA | TATA-box-binding protein B OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) GN=tbpB1 PE=3 SV=1 | 133 | 303 | 7.0E-30 |
sp|Q8PY36|TBP2_METMA | TATA-box-binding protein 2 OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=tbp2 PE=3 SV=1 | 133 | 296 | 1.0E-29 |
sp|Q9HHE9|TBPF_HALSA | TATA-box-binding protein F OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) GN=tbpF PE=3 SV=1 | 133 | 283 | 2.0E-29 |
sp|Q8TU94|TBP2_METAC | TATA-box-binding protein 2 OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=tbp2 PE=3 SV=1 | 132 | 300 | 3.0E-29 |
sp|Q8TI26|TBP1_METAC | TATA-box-binding protein 1 OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=tbp1 PE=3 SV=1 | 133 | 284 | 3.0E-29 |
sp|Q8PUZ4|TBP3_METMA | TATA-box-binding protein 3 OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=tbp3 PE=3 SV=1 | 132 | 298 | 7.0E-28 |
sp|Q8PY37|TBP1_METMA | TATA-box-binding protein 1 OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=tbp1 PE=3 SV=1 | 133 | 284 | 9.0E-28 |
sp|Q8TX38|TBP_METKA | TATA-box-binding protein OS=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=tbp PE=3 SV=1 | 133 | 288 | 5.0E-26 |
sp|O52004|TBPC_HALSA | TATA-box-binding protein C OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) GN=tbpC1 PE=3 SV=1 | 133 | 293 | 9.0E-18 |
sp|O27664|TBP_METTH | TATA-box-binding protein OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=tbp PE=3 SV=1 | 133 | 210 | 2.0E-14 |
sp|Q57930|TBP_METJA | TATA-box-binding protein OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=tbp PE=1 SV=1 | 118 | 212 | 4.0E-14 |
sp|Q2NFC3|TBP_METST | TATA-box-binding protein OS=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) GN=tbp PE=3 SV=1 | 133 | 204 | 8.0E-14 |
sp|P58178|TBP_SULSO | TATA-box-binding protein OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=tbp PE=3 SV=1 | 120 | 213 | 1.0E-13 |
sp|B6YXI6|TBP_THEON | TATA-box-binding protein OS=Thermococcus onnurineus (strain NA1) GN=tbp PE=3 SV=1 | 133 | 214 | 1.0E-13 |
sp|O29874|TBP_ARCFU | TATA-box-binding protein OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=tbp PE=3 SV=1 | 133 | 214 | 2.0E-13 |
sp|C6A0R1|TBP_THESM | TATA-box-binding protein OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=tbp PE=3 SV=1 | 133 | 214 | 2.0E-13 |
sp|Q3ITB1|TBP_NATPD | TATA-box-binding protein OS=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) GN=tbp PE=3 SV=1 | 132 | 214 | 2.0E-13 |
sp|Q9V024|TBP_PYRAB | TATA-box-binding protein OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=tbp PE=3 SV=1 | 133 | 214 | 2.0E-13 |
sp|Q8ZVR0|TBP_PYRAE | TATA-box-binding protein OS=Pyrobaculum aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=tbp PE=3 SV=1 | 133 | 213 | 4.0E-13 |
sp|Q8TX38|TBP_METKA | TATA-box-binding protein OS=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=tbp PE=3 SV=1 | 133 | 214 | 4.0E-13 |
sp|Q52366|TBP_THEKO | TATA-box-binding protein OS=Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) GN=tbp PE=3 SV=1 | 133 | 221 | 6.0E-13 |
sp|P62001|TBP_PYRWO | TATA-box-binding protein OS=Pyrococcus woesei GN=tbp PE=1 SV=1 | 133 | 213 | 6.0E-13 |
sp|P62000|TBP_PYRFU | TATA-box-binding protein OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=tbp PE=3 SV=1 | 133 | 213 | 6.0E-13 |
sp|Q6L1R1|TBP_PICTO | TATA-box-binding protein OS=Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=tbp PE=3 SV=1 | 133 | 214 | 7.0E-13 |
sp|A3MV36|TBP_PYRCJ | TATA-box-binding protein OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=tbp PE=3 SV=1 | 133 | 213 | 1.0E-12 |
sp|A1RSQ1|TBP_PYRIL | TATA-box-binding protein OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189 / GEO3) GN=tbp PE=3 SV=1 | 133 | 213 | 1.0E-12 |
sp|O58737|TBP_PYRHO | TATA-box-binding protein OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=tbp PE=3 SV=1 | 133 | 214 | 1.0E-12 |
sp|B1Y949|TBP_PYRNV | TATA-box-binding protein OS=Pyrobaculum neutrophilum (strain DSM 2338 / JCM 9278 / V24Sta) GN=tbp PE=3 SV=1 | 133 | 213 | 2.0E-12 |
sp|Q9HLM8|TBP_THEAC | TATA-box-binding protein OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=tbp PE=3 SV=1 | 133 | 214 | 4.0E-12 |
sp|Q8TI26|TBP1_METAC | TATA-box-binding protein 1 OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=tbp1 PE=3 SV=1 | 132 | 199 | 4.0E-12 |
sp|A0B5H8|TBP_METTP | TATA-box-binding protein OS=Methanosaeta thermophila (strain DSM 6194 / JCM 14653 / NBRC 101360 / PT) GN=tbp PE=3 SV=1 | 133 | 214 | 5.0E-12 |
sp|Q978J5|TBP_THEVO | TATA-box-binding protein OS=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=tbp PE=3 SV=1 | 133 | 214 | 5.0E-12 |
sp|Q8PY36|TBP2_METMA | TATA-box-binding protein 2 OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=tbp2 PE=3 SV=1 | 132 | 199 | 9.0E-12 |
sp|Q9HN56|TBPE_HALSA | TATA-box-binding protein E OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) GN=tbpE PE=3 SV=1 | 132 | 214 | 1.0E-11 |
sp|Q8TTZ7|TBP3_METAC | TATA-box-binding protein 3 OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=tbp3 PE=3 SV=1 | 133 | 214 | 1.0E-11 |
sp|D4H071|TBP2_HALVD | TATA-box-binding protein 2 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=tbp2 PE=1 SV=1 | 132 | 214 | 2.0E-11 |
sp|Q8PY37|TBP1_METMA | TATA-box-binding protein 1 OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=tbp1 PE=3 SV=1 | 132 | 199 | 2.0E-11 |
sp|D4H071|TBP2_HALVD | TATA-box-binding protein 2 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=tbp2 PE=1 SV=1 | 221 | 306 | 3.0E-11 |
sp|Q8TX38|TBP_METKA | TATA-box-binding protein OS=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=tbp PE=3 SV=1 | 221 | 296 | 3.0E-11 |
sp|D4GZA2|TBP1_HALVD | TATA-box-binding protein 1 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=tbp1 PE=3 SV=1 | 221 | 306 | 4.0E-11 |
sp|Q56253|TBP_THECE | TATA-box-binding protein OS=Thermococcus celer GN=tbp PE=3 SV=1 | 221 | 300 | 7.0E-11 |
sp|Q5V470|TBP_HALMA | TATA-box-binding protein OS=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=tbp PE=3 SV=1 | 132 | 214 | 8.0E-11 |
sp|B6YXI6|TBP_THEON | TATA-box-binding protein OS=Thermococcus onnurineus (strain NA1) GN=tbp PE=3 SV=1 | 215 | 300 | 1.0E-10 |
sp|Q9HHE9|TBPF_HALSA | TATA-box-binding protein F OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) GN=tbpF PE=3 SV=1 | 221 | 303 | 2.0E-10 |
sp|C6A0R1|TBP_THESM | TATA-box-binding protein OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=tbp PE=3 SV=1 | 220 | 300 | 4.0E-10 |
sp|A6URP5|TBP_METVS | TATA-box-binding protein OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=tbp PE=3 SV=1 | 118 | 212 | 4.0E-09 |
sp|Q6L1R1|TBP_PICTO | TATA-box-binding protein OS=Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=tbp PE=3 SV=1 | 216 | 296 | 5.0E-09 |
sp|Q8TU94|TBP2_METAC | TATA-box-binding protein 2 OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=tbp2 PE=3 SV=1 | 133 | 214 | 6.0E-09 |
sp|Q52366|TBP_THEKO | TATA-box-binding protein OS=Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) GN=tbp PE=3 SV=1 | 221 | 300 | 1.0E-08 |
sp|Q9HHE9|TBPF_HALSA | TATA-box-binding protein F OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) GN=tbpF PE=3 SV=1 | 133 | 214 | 1.0E-08 |
sp|Q8PUZ4|TBP3_METMA | TATA-box-binding protein 3 OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=tbp3 PE=3 SV=1 | 219 | 302 | 8.0E-08 |
sp|A0B5H8|TBP_METTP | TATA-box-binding protein OS=Methanosaeta thermophila (strain DSM 6194 / JCM 14653 / NBRC 101360 / PT) GN=tbp PE=3 SV=1 | 219 | 300 | 2.0E-07 |
sp|O29874|TBP_ARCFU | TATA-box-binding protein OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=tbp PE=3 SV=1 | 220 | 303 | 3.0E-07 |
sp|O52004|TBPC_HALSA | TATA-box-binding protein C OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) GN=tbpC1 PE=3 SV=1 | 132 | 212 | 3.0E-07 |
sp|Q8PY36|TBP2_METMA | TATA-box-binding protein 2 OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=tbp2 PE=3 SV=1 | 219 | 296 | 4.0E-07 |
sp|Q8TI26|TBP1_METAC | TATA-box-binding protein 1 OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=tbp1 PE=3 SV=1 | 219 | 296 | 4.0E-07 |
sp|Q8PY37|TBP1_METMA | TATA-box-binding protein 1 OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=tbp1 PE=3 SV=1 | 219 | 296 | 2.0E-06 |
sp|Q8TTZ7|TBP3_METAC | TATA-box-binding protein 3 OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=tbp3 PE=3 SV=1 | 219 | 284 | 3.0E-06 |
sp|O74045|TBP_CENSY | TATA-box-binding protein OS=Cenarchaeum symbiosum (strain A) GN=tbp PE=3 SV=1 | 129 | 202 | 5.0E-06 |
GO Term | Description | Terminal node |
---|---|---|
GO:0003677 | DNA binding | Yes |
GO:0006352 | DNA-templated transcription, initiation | Yes |
GO:1901360 | organic cyclic compound metabolic process | No |
GO:0006725 | cellular aromatic compound metabolic process | No |
GO:0044271 | cellular nitrogen compound biosynthetic process | No |
GO:0044238 | primary metabolic process | No |
GO:0005488 | binding | No |
GO:1901576 | organic substance biosynthetic process | No |
GO:0009059 | macromolecule biosynthetic process | No |
GO:0006807 | nitrogen compound metabolic process | No |
GO:0090304 | nucleic acid metabolic process | No |
GO:0046483 | heterocycle metabolic process | No |
GO:0003676 | nucleic acid binding | No |
GO:0044249 | cellular biosynthetic process | No |
GO:0008152 | metabolic process | No |
GO:0032774 | RNA biosynthetic process | No |
GO:0003674 | molecular_function | No |
GO:0008150 | biological_process | No |
GO:0034654 | nucleobase-containing compound biosynthetic process | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0009058 | biosynthetic process | No |
GO:0009987 | cellular process | No |
GO:0016070 | RNA metabolic process | No |
GO:0071704 | organic substance metabolic process | No |
GO:1901362 | organic cyclic compound biosynthetic process | No |
GO:0019438 | aromatic compound biosynthetic process | No |
GO:0018130 | heterocycle biosynthetic process | No |
GO:0044237 | cellular metabolic process | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0043170 | macromolecule metabolic process | No |
GO:0006139 | nucleobase-containing compound metabolic process | No |
GO:0034641 | cellular nitrogen compound metabolic process | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 39 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Agabi119p4|611100 MSFALPARQVTFSRPNTQQQPYQPPQQPQYQPPQAHGLALPSGNAYNAPVQSSSGIALPGPSPLSNSYVPPQPTQ HSQAVANKLSPTQQTGSSTTAVAGPSTSTAGTPVPSTPVPLTLEQQHITAVEGIVPTLQNIVATVNLDCRLDLKT IALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVVTGAKSEDDSRLASRKYARIVQKLGFDAKFSEFKIQN IVGSCDVKFPIRLEGLAYSHGQFSSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVREEIYTAFNTIYTVL CEFRKP* |
Coding | >Agabi119p4|611100 ATGTCTTTCGCGTTGCCCGCCCGCCAAGTCACCTTTTCCCGCCCCAATACTCAGCAGCAGCCGTACCAGCCGCCG CAACAGCCCCAGTATCAGCCGCCGCAGGCTCATGGCTTGGCTCTTCCGTCGGGGAACGCGTATAATGCTCCAGTC CAGTCTAGTTCTGGCATAGCATTGCCGGGGCCTTCGCCACTTTCCAACTCTTATGTTCCTCCTCAACCGACTCAG CACTCTCAAGCCGTCGCGAACAAGCTTTCTCCTACTCAGCAGACTGGTTCGTCAACCACGGCTGTTGCTGGTCCA TCGACGTCGACTGCTGGGACGCCAGTGCCCTCGACGCCGGTGCCTCTTACTCTCGAGCAGCAACATATTACCGCG GTCGAGGGTATCGTGCCTACTCTCCAGAACATCGTTGCCACAGTCAACTTGGACTGTCGACTGGACCTAAAGACG ATCGCCCTTCACGCCAGGAATGCTGAATACAACCCTAAGCGTTTCGCGGCCGTCATTATGCGAATTCGTGATCCG AAGACAACCGCCCTCATCTTTGCGTCGGGCAAGATGGTCGTGACGGGCGCGAAGTCGGAGGACGATTCGCGTCTG GCGTCGCGTAAATACGCGCGTATCGTGCAGAAATTGGGCTTTGACGCCAAATTCTCTGAGTTCAAGATACAAAAC ATTGTGGGCAGTTGCGATGTCAAGTTCCCTATTCGACTTGAGGGTCTTGCATACTCCCATGGACAGTTCAGCAGT TACGAACCTGAGCTGTTCCCTGGCTTAATCTATCGCATGATCAAGCCGAAGGTTGTGCTGCTCATCTTCGTCTCG GGAAAGATTGTCTTAACCGGCGCCAAGGTCCGAGAGGAGATTTATACTGCCTTCAACACGATCTATACTGTCTTG TGTGAATTCCGCAAGCCGTGA |
Transcript | >Agabi119p4|611100 ATGTCTTTCGCGTTGCCCGCCCGCCAAGTCACCTTTTCCCGCCCCAATACTCAGCAGCAGCCGTACCAGCCGCCG CAACAGCCCCAGTATCAGCCGCCGCAGGCTCATGGCTTGGCTCTTCCGTCGGGGAACGCGTATAATGCTCCAGTC CAGTCTAGTTCTGGCATAGCATTGCCGGGGCCTTCGCCACTTTCCAACTCTTATGTTCCTCCTCAACCGACTCAG CACTCTCAAGCCGTCGCGAACAAGCTTTCTCCTACTCAGCAGACTGGTTCGTCAACCACGGCTGTTGCTGGTCCA TCGACGTCGACTGCTGGGACGCCAGTGCCCTCGACGCCGGTGCCTCTTACTCTCGAGCAGCAACATATTACCGCG GTCGAGGGTATCGTGCCTACTCTCCAGAACATCGTTGCCACAGTCAACTTGGACTGTCGACTGGACCTAAAGACG ATCGCCCTTCACGCCAGGAATGCTGAATACAACCCTAAGCGTTTCGCGGCCGTCATTATGCGAATTCGTGATCCG AAGACAACCGCCCTCATCTTTGCGTCGGGCAAGATGGTCGTGACGGGCGCGAAGTCGGAGGACGATTCGCGTCTG GCGTCGCGTAAATACGCGCGTATCGTGCAGAAATTGGGCTTTGACGCCAAATTCTCTGAGTTCAAGATACAAAAC ATTGTGGGCAGTTGCGATGTCAAGTTCCCTATTCGACTTGAGGGTCTTGCATACTCCCATGGACAGTTCAGCAGT TACGAACCTGAGCTGTTCCCTGGCTTAATCTATCGCATGATCAAGCCGAAGGTTGTGCTGCTCATCTTCGTCTCG GGAAAGATTGTCTTAACCGGCGCCAAGGTCCGAGAGGAGATTTATACTGCCTTCAACACGATCTATACTGTCTTG TGTGAATTCCGCAAGCCGTGA |
Gene | >Agabi119p4|611100 ATGTCTTTCGCGTTGCCCGCCCGCCAAGTCACCTTTTCCCGCCCCAATACTCAGCAGCAGCCGTACCAGCCGCCG CAACAGCCCCAGTATCAGCCGCCGCAGGCTCATGGCTTGGCTCTTCCGTCGGGGAACGCGTATAATGCTCCAGTC CAGTCTAGTTCTGGCATAGCATTGCCGGGGCCTTCGCCACTTTCCAACTCTTATGTTCCTCCTCAACCGACTCAG CACTCTCAAGCCGTCGCGAACAAGCTTTCTCCTACTCAGCAGACTGGTTCGTCAACCACGGCTGTTGCTGGTCCA TCGACGTCGACTGCTGGGACGCCAGTGCCCTCGACGCCGGTGCCTCTTACTCTCGAGCAGCAACATATTACCGCG GTCGAGGGTATCGTGCCTACTCTCCAGAACATCGTTGCCACAGTCAACTTGGACTGTCGACTGGACCTAAAGACG ATCGCCCTTCACGCCAGGAATGCTGAATACAACCCTAAGGTTTGTACATGATCCCTAAGCTTATAATGTATGGCA AAGTCGAACTGCTCGATATTTGCATGATTATAGCGTTTCGCGGCCGTCATTATGCGAATTCGTGATCCGAAGACA ACCGCCCTCATCTTTGCGTCGGGCAAGATGGTCGTGACGGGCGCGAAGTCGGAGGACGATTCGCGTCTGGCGTCG CGTAAATACGCGCGTATCGTGCAGAAATTGGGCTTTGACGCCAAATTCTCTGAGTTCAAGATACAAAACATTGTG GGCAGTTGCGATGTCAAGTTCCCTATTCGACTTGAGGGTCTTGCATACTCCCATGGACAGTTCAGCAGTTACGAA CCTGAGGTACGGCAGCCTATCATGTCTTTGAATATGATGTTGAACGTATTCTTAGCTGTTCCCTGGCTTAATCTA TCGCATGATCAAGCCGAAGGTTGTGCTGCTCATCTTCGTCTCGGGAAAGATTGTCTTAACCGGCGCCAAGGTGAA TCATCTTTTTTTCTTCTCTTTTCCCATGATCAGAGCCTCGCGGCTCTGTTCACCCTGCGGATAATCCCCGCATAA TCTGGATTGTCTCCTGCAACCTGAGATCAGCTTGCTGACACCGCTTCCGTGACCATCAGGTCCGAGAGGAGATTT ATACTGCCTTCAACACGATCTATACTGTCTTGTGTGAATTCCGCAAGCCGTGA |