Fungal Genomics

Agaricus bisporus var bisporus H39 Agaricus bisporus var bisporus H97 Agaricus bisporus var burnettii H119p4 Aspergillus niger CBS 112.32 Aspergillus niger CBS 113.50 Aspergillus niger CBS 115988 Aspergillus niger CBS 115989 Aspergillus niger CBS 118.52 Aspergillus niger CBS 124.48 Aspergillus niger CBS 131.52 Aspergillus niger CBS 133816 Aspergillus niger CBS 147320 Aspergillus niger CBS 147321 Aspergillus niger CBS 147322 Aspergillus niger CBS 147323 Aspergillus niger CBS 147324 Aspergillus niger CBS 147343 Aspergillus niger CBS 147344 Aspergillus niger CBS 147345 Aspergillus niger CBS 147346 Aspergillus niger CBS 147347 Aspergillus niger CBS 147352 Aspergillus niger CBS 147353 Aspergillus niger CBS 147371 Aspergillus niger CBS 147482 Aspergillus niger CBS 630.78 Aspergillus niger CBS 769.97 Niveomyces coronatus CBS 149186 Ophiocordyceps australis 1348a (Ghana) Ophiocordyceps australis map64 (Brazil) Ophiocordyceps camponoti-floridani Ophiocordyceps camponoti-rufipedis Ophiocordyceps kimflemingae Ophiocordyceps subramaniannii Penicillium roqueforti DTO002I6 Penicillium roqueforti DTO003C3 Penicillium roqueforti DTO003H1 (CBS 147308) Penicillium roqueforti DTO006G1 Penicillium roqueforti DTO006G7 Penicillium roqueforti DTO012A1 Penicillium roqueforti DTO012A2 (CBS 147309) Penicillium roqueforti DTO012A6 (CBS 147310) Penicillium roqueforti DTO012A7 Penicillium roqueforti DTO012A8 Penicillium roqueforti DTO012A9 Penicillium roqueforti DTO013E5 Penicillium roqueforti DTO013F2 Penicillium roqueforti DTO013F5 (CBS 147311) Penicillium roqueforti DTO027I6 Penicillium roqueforti DTO032C6 Penicillium roqueforti DTO039G3 Penicillium roqueforti DTO046C5 Penicillium roqueforti DTO070G2 (CBS 147317) Penicillium roqueforti DTO081F9 (CBS 147318) Penicillium roqueforti DTO101D6 (CBS 147325) Penicillium roqueforti DTO102I9 (CBS 147326) Penicillium roqueforti DTO126G2 (CBS 147330) Penicillium roqueforti DTO127F7 (CBS 147331) Penicillium roqueforti DTO127F9 (CBS 147332) Penicillium roqueforti DTO130C1 (CBS 147333) Penicillium roqueforti DTO163C3 (CBS 147337) Penicillium roqueforti DTO163F5 (CBS 147338) Penicillium roqueforti DTO163G4 (CBS 147339) Penicillium roqueforti DTO265D5 (CBS 147372) Penicillium roqueforti DTO369A1 (CBS 147354) Penicillium roqueforti DTO375B1 (CBS 147355) Penicillium roqueforti DTO377G2 (LCP 96.3914a) Penicillium roqueforti LCP96 04111 Rhodonia placenta FPRL280 Torrubiellomyces zombiae CBS 149187

General Properties

Protein ID	Agabi119p4|611000
Gene name
Location	scaffold_03b:540580..543042
Strand	-
Gene length (bp)	2462
Transcript length (bp)	2346
Coding sequence length (bp)	2346
Protein length (aa)	782

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00538	Linker_histone	linker histone H1 and H5 family	7.1E-06	321	388

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0003677	DNA binding	Yes
GO:0006334	nucleosome assembly	Yes
GO:0000786	nucleosome	Yes
GO:0071840	cellular component organization or biogenesis	No
GO:0065003	protein-containing complex assembly	No
GO:0003674	molecular_function	No
GO:0022607	cellular component assembly	No
GO:0034728	nucleosome organization	No
GO:0044815	DNA packaging complex	No
GO:0003676	nucleic acid binding	No
GO:0032991	protein-containing complex	No
GO:0071824	protein-DNA complex subunit organization	No
GO:0032993	protein-DNA complex	No
GO:0005488	binding	No
GO:0006338	chromatin remodeling	No
GO:0097159	organic cyclic compound binding	No
GO:0005575	cellular_component	No
GO:0009987	cellular process	No
GO:0065004	protein-DNA complex assembly	No
GO:0006325	chromatin organization	No
GO:1901363	heterocyclic compound binding	No
GO:0043933	protein-containing complex organization	No
GO:0008150	biological_process	No
GO:0016043	cellular component organization	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 27	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|611000 MQAASSSYLPPHPLSPPPPPQPPQSYYQGLYHIQSLGPQDHELKRQYLGLLETKQVIEICLMLDVYVAPYVRGMI WPQDLGAAITGLRKSTTSNGASTAAGVGASAATTTTSNDDDDASVSTTRSGRKEGEEEPVMASLDGLKEGSGGRV VENGERVEKASQEVTKTAATTTEMETAPMSGLAQVSTSSTGASATPALTSSTPAPTSSTPAPASAAPAPAPNQQQ PPYPHQPYGYPQHPTAAYPHAPYYPPPPPGYPSYPPSSYPHYPPPPNGYPTAPGGYPLPYSTPSSHPHQQSFPHL HPPPPHPQSHVHQEQTPDEIPSYEEMIVEALQESASADPEGCAPKDLFSWMAARYPLQSNFRPSASQALQKAFKR GRLEKSSNGKYRLSGTWEGGSTSRRTTRRPQMQQHSQPNAMVPPSASSSHPQLPPSGSPFTHAPLVHHHHHNTHA SAYPYAYGYPGYPQIHPGQQQQPSTTDNSVTKNTTGDKTTIAAATSDESDKDAYEAAQNILKAINFGDLLQISQT EEGGNNVNNKGGGAAGGGDAGEVSMDQLTSLLIQAQHAISGQRQSMEGQQQQQQQQQQQQQQVAGALTSSLHGGV ITPLPTLSATAGVAVASSTSTSNGAAASTSTQLNGTSLATTMGVGQTMNVRAELQAQLALLAVQLAELGQEGENG GGGNGVVEQLLQSQNGMTVVGSRNEENGIEGAVTQRVITPPMNGLVPLSLDSNPNPNPNTISSGVEGTKSVSASA LESQTRLGKERKGDDDDDSLIDPLYEMRVWW*
Coding	>Agabi119p4|611000 ATGCAGGCTGCCAGCTCGTCTTATCTTCCTCCTCATCCTCTATCACCCCCACCCCCACCACAACCTCCACAATCG TATTACCAAGGATTATATCATATACAGTCTCTTGGACCGCAGGATCATGAACTTAAGAGACAATATCTGGGTTTG TTGGAGACGAAACAGGTTATTGAGATATGTTTGATGTTGGATGTGTATGTGGCGCCGTATGTGAGAGGTATGATT TGGCCTCAGGATTTGGGGGCTGCGATTACTGGGTTGAGGAAATCGACGACGAGTAATGGTGCTTCTACTGCTGCT GGTGTTGGTGCTAGTGCTGCGACTACGACGACGAGTAATGATGATGATGATGCTTCGGTGTCTACGACTAGGTCG GGGAGGAAGGAGGGGGAGGAGGAACCTGTGATGGCTTCGTTGGATGGATTGAAGGAAGGATCTGGTGGTCGTGTT GTGGAAAATGGTGAGAGGGTGGAGAAAGCATCGCAGGAGGTAACAAAAACAGCGGCGACGACGACGGAGATGGAG ACGGCGCCGATGAGTGGACTTGCTCAGGTATCGACATCATCAACGGGTGCATCTGCTACGCCTGCGCTTACATCT TCTACTCCTGCACCTACGTCTTCTACTCCTGCTCCTGCGTCTGCTGCTCCTGCTCCTGCTCCCAATCAGCAACAG CCGCCTTATCCTCATCAGCCTTACGGTTATCCTCAACATCCTACGGCAGCCTATCCTCATGCACCATACTACCCA CCACCTCCACCTGGTTATCCTTCCTATCCTCCGTCATCGTACCCTCATTATCCACCACCCCCTAACGGTTATCCC ACCGCACCAGGAGGATATCCCCTCCCTTACTCAACTCCATCATCACACCCTCATCAACAATCATTTCCACATCTT CATCCCCCTCCCCCTCATCCGCAGTCCCATGTTCATCAAGAACAAACTCCAGATGAAATACCTAGTTATGAAGAA ATGATTGTTGAAGCGTTACAAGAATCTGCATCTGCAGATCCTGAAGGATGTGCACCTAAAGATCTGTTTTCGTGG ATGGCGGCTAGGTATCCTTTGCAGTCGAATTTTAGGCCGTCGGCGAGTCAGGCTTTGCAGAAGGCTTTTAAGAGG GGGAGGTTGGAGAAGAGTAGTAACGGAAAATATAGGTTGAGTGGGACTTGGGAAGGAGGAAGTACGTCGAGAAGA ACGACGAGACGTCCGCAAATGCAACAGCATAGTCAACCTAATGCTATGGTACCACCATCGGCTTCGTCATCACAT CCACAACTACCACCGTCTGGTTCACCGTTCACTCATGCTCCCCTTGTACACCATCACCATCATAATACGCATGCT TCAGCGTATCCTTATGCTTATGGATATCCTGGATATCCTCAAATACATCCTGGACAACAACAACAACCATCTACA ACAGATAATTCTGTTACGAAGAATACTACTGGAGATAAAACTACGATTGCTGCTGCGACGTCGGATGAATCGGAT AAAGATGCATATGAAGCCGCTCAAAATATACTCAAGGCCATCAATTTCGGTGATTTATTACAAATTTCTCAAACT GAAGAGGGGGGTAATAATGTTAATAATAAAGGAGGAGGAGCGGCGGGAGGAGGAGATGCGGGGGAAGTGTCGATG GATCAACTTACGTCGTTGTTGATTCAAGCGCAACATGCTATTTCGGGTCAGAGGCAGTCTATGGAGGGACAACAA CAACAACAACAACAACAACAACAACAACAACAACAGGTTGCGGGAGCTTTGACTTCGAGTTTGCATGGTGGAGTG ATAACGCCGTTACCGACGTTGAGCGCTACGGCTGGTGTCGCTGTGGCTTCTTCTACTTCTACTTCTAATGGTGCT GCTGCTTCTACGTCAACTCAGCTTAATGGAACGTCTTTGGCGACGACGATGGGGGTGGGGCAAACAATGAATGTA CGTGCGGAATTGCAGGCTCAACTTGCGCTTTTGGCTGTGCAGTTGGCGGAATTGGGACAGGAAGGTGAGAATGGT GGTGGTGGTAATGGAGTGGTTGAGCAACTTTTGCAAAGTCAAAATGGGATGACTGTTGTTGGGTCAAGGAATGAA GAAAATGGTATTGAAGGAGCGGTGACGCAAAGAGTGATTACCCCGCCTATGAATGGTTTAGTACCTCTTTCTCTT GATTCGAATCCGAATCCGAATCCGAATACCATTTCGTCGGGGGTGGAGGGAACAAAATCTGTTTCGGCATCGGCA TTGGAATCTCAAACGCGGTTAGGGAAGGAAAGAAAGGGGGATGATGATGATGATAGTTTGATTGATCCTCTCTAC GAAATGCGAGTGTGGTGGTAG
Transcript	>Agabi119p4|611000 ATGCAGGCTGCCAGCTCGTCTTATCTTCCTCCTCATCCTCTATCACCCCCACCCCCACCACAACCTCCACAATCG TATTACCAAGGATTATATCATATACAGTCTCTTGGACCGCAGGATCATGAACTTAAGAGACAATATCTGGGTTTG TTGGAGACGAAACAGGTTATTGAGATATGTTTGATGTTGGATGTGTATGTGGCGCCGTATGTGAGAGGTATGATT TGGCCTCAGGATTTGGGGGCTGCGATTACTGGGTTGAGGAAATCGACGACGAGTAATGGTGCTTCTACTGCTGCT GGTGTTGGTGCTAGTGCTGCGACTACGACGACGAGTAATGATGATGATGATGCTTCGGTGTCTACGACTAGGTCG GGGAGGAAGGAGGGGGAGGAGGAACCTGTGATGGCTTCGTTGGATGGATTGAAGGAAGGATCTGGTGGTCGTGTT GTGGAAAATGGTGAGAGGGTGGAGAAAGCATCGCAGGAGGTAACAAAAACAGCGGCGACGACGACGGAGATGGAG ACGGCGCCGATGAGTGGACTTGCTCAGGTATCGACATCATCAACGGGTGCATCTGCTACGCCTGCGCTTACATCT TCTACTCCTGCACCTACGTCTTCTACTCCTGCTCCTGCGTCTGCTGCTCCTGCTCCTGCTCCCAATCAGCAACAG CCGCCTTATCCTCATCAGCCTTACGGTTATCCTCAACATCCTACGGCAGCCTATCCTCATGCACCATACTACCCA CCACCTCCACCTGGTTATCCTTCCTATCCTCCGTCATCGTACCCTCATTATCCACCACCCCCTAACGGTTATCCC ACCGCACCAGGAGGATATCCCCTCCCTTACTCAACTCCATCATCACACCCTCATCAACAATCATTTCCACATCTT CATCCCCCTCCCCCTCATCCGCAGTCCCATGTTCATCAAGAACAAACTCCAGATGAAATACCTAGTTATGAAGAA ATGATTGTTGAAGCGTTACAAGAATCTGCATCTGCAGATCCTGAAGGATGTGCACCTAAAGATCTGTTTTCGTGG ATGGCGGCTAGGTATCCTTTGCAGTCGAATTTTAGGCCGTCGGCGAGTCAGGCTTTGCAGAAGGCTTTTAAGAGG GGGAGGTTGGAGAAGAGTAGTAACGGAAAATATAGGTTGAGTGGGACTTGGGAAGGAGGAAGTACGTCGAGAAGA ACGACGAGACGTCCGCAAATGCAACAGCATAGTCAACCTAATGCTATGGTACCACCATCGGCTTCGTCATCACAT CCACAACTACCACCGTCTGGTTCACCGTTCACTCATGCTCCCCTTGTACACCATCACCATCATAATACGCATGCT TCAGCGTATCCTTATGCTTATGGATATCCTGGATATCCTCAAATACATCCTGGACAACAACAACAACCATCTACA ACAGATAATTCTGTTACGAAGAATACTACTGGAGATAAAACTACGATTGCTGCTGCGACGTCGGATGAATCGGAT AAAGATGCATATGAAGCCGCTCAAAATATACTCAAGGCCATCAATTTCGGTGATTTATTACAAATTTCTCAAACT GAAGAGGGGGGTAATAATGTTAATAATAAAGGAGGAGGAGCGGCGGGAGGAGGAGATGCGGGGGAAGTGTCGATG GATCAACTTACGTCGTTGTTGATTCAAGCGCAACATGCTATTTCGGGTCAGAGGCAGTCTATGGAGGGACAACAA CAACAACAACAACAACAACAACAACAACAACAACAGGTTGCGGGAGCTTTGACTTCGAGTTTGCATGGTGGAGTG ATAACGCCGTTACCGACGTTGAGCGCTACGGCTGGTGTCGCTGTGGCTTCTTCTACTTCTACTTCTAATGGTGCT GCTGCTTCTACGTCAACTCAGCTTAATGGAACGTCTTTGGCGACGACGATGGGGGTGGGGCAAACAATGAATGTA CGTGCGGAATTGCAGGCTCAACTTGCGCTTTTGGCTGTGCAGTTGGCGGAATTGGGACAGGAAGGTGAGAATGGT GGTGGTGGTAATGGAGTGGTTGAGCAACTTTTGCAAAGTCAAAATGGGATGACTGTTGTTGGGTCAAGGAATGAA GAAAATGGTATTGAAGGAGCGGTGACGCAAAGAGTGATTACCCCGCCTATGAATGGTTTAGTACCTCTTTCTCTT GATTCGAATCCGAATCCGAATCCGAATACCATTTCGTCGGGGGTGGAGGGAACAAAATCTGTTTCGGCATCGGCA TTGGAATCTCAAACGCGGTTAGGGAAGGAAAGAAAGGGGGATGATGATGATGATAGTTTGATTGATCCTCTCTAC GAAATGCGAGTGTGGTGGTAG
Gene	>Agabi119p4|611000 ATGCAGGCTGCCAGCTCGTCTTATCTTCCTCCTCATCCTCTATCACCCCCACCCCCACCACAACCTCCACAATCG TATTACCAAGGATTATATCATATACAGTCTCTTGGTGTGTACAATACTCGTCGTCATTGATAAAATGAATAATCG TAATTATTGTGGTGGAATAGGACCGCAGGATCATGAACTTAAGAGACAATATCTGGGTTTGTTGGAGACGAAACA GGTTATTGAGATATGTTTGATGTTGGATGTGTATGTGGCGCCGTATGTGAGAGGTATGATTTGGCCTCAGGATTT GGGGGCTGCGATTACTGGGTTGAGGAAATCGACGACGAGTAATGGTGCTTCTACTGCTGCTGGTGTTGGTGCTAG TGCTGCGACTACGACGACGAGTAATGATGATGATGATGCTTCGGTGTCTACGACTAGGTCGGGGAGGAAGGAGGG GGAGGAGGAACCTGTGATGGCTTCGTTGGATGGATTGAAGGAAGGATCTGGTGGTCGTGTTGTGGAAAATGGTGA GAGGGTGGAGAAAGCATCGCAGGAGGTAACAAAAACAGCGGCGACGACGACGGAGATGGAGACGGCGCCGATGAG TGGACTTGCTCAGGTATCGACATCATCAACGGGTGCATCTGCTACGCCTGCGCTTACATCTTCTACTCCTGCACC TACGTCTTCTACTCCTGCTCCTGCGTCTGCTGCTCCTGCTCCTGCTCCCAATCAGCAACAGCCGCCTTATCCTCA TCAGCCTTACGGTTATCCTCAACATCCTACGGCAGCCTATCCTCATGCACCATACTACCCACCACCTCCACCTGG TTATCCTTCCTATCCTCCGTCATCGTACCCTCATTATCCACCACCCCCTAACGGTTATCCCACCGCACCAGGAGG ATATCCCCTCCCTTACTCAACTCCATCATCACACCCTCATCAACAATCATTTCCACATCTTCATCCCCCTCCCCC TCATCCGCAGTCCCATGTTCATCAAGAACAAACTCCAGATGAAATACCTAGTTATGAAGAAATGATTGTTGAAGC GTTACAAGAATCTGCATCTGCAGATCCTGAAGGATGTGCACCTAAAGATCTGTTTTCGTGGATGGCGGCTAGGTA TCCTTTGCAGTCGAATTTTAGGCCGTCGGCGAGTCAGGCTTTGCAGAAGGCTTTTAAGAGGGGGAGGTTGGAGAA GAGTAGTAACGGAAAATATAGGTTGAGTGGGACTTGGGAAGGAGGAAGTGTAAGTGCCTCTGCCCAGATTGGTGA GGTTTATCTTATTTTATTTTATTTGGTAGACGTCGAGAAGAACGACGAGACGTCCGCAAATGCAACAGCATAGTC AACCTAATGCTATGGTACCACCATCGGCTTCGTCATCACATCCACAACTACCACCGTCTGGTTCACCGTTCACTC ATGCTCCCCTTGTACACCATCACCATCATAATACGCATGCTTCAGCGTATCCTTATGCTTATGGATATCCTGGAT ATCCTCAAATACATCCTGGACAACAACAACAACCATCTACAACAGATAATTCTGTTACGAAGAATACTACTGGAG ATAAAACTACGATTGCTGCTGCGACGTCGGATGAATCGGATAAAGATGCATATGAAGCCGCTCAAAATATACTCA AGGCCATCAATTTCGGTGATTTATTACAAATTTCTCAAACTGAAGAGGGGGGTAATAATGTTAATAATAAAGGAG GAGGAGCGGCGGGAGGAGGAGATGCGGGGGAAGTGTCGATGGATCAACTTACGTCGTTGTTGATTCAAGCGCAAC ATGCTATTTCGGGTCAGAGGCAGTCTATGGAGGGACAACAACAACAACAACAACAACAACAACAACAACAACAAC AGGTTGCGGGAGCTTTGACTTCGAGTTTGCATGGTGGAGTGATAACGCCGTTACCGACGTTGAGCGCTACGGCTG GTGTCGCTGTGGCTTCTTCTACTTCTACTTCTAATGGTGCTGCTGCTTCTACGTCAACTCAGCTTAATGGAACGT CTTTGGCGACGACGATGGGGGTGGGGCAAACAATGAATGTACGTGCGGAATTGCAGGCTCAACTTGCGCTTTTGG CTGTGCAGTTGGCGGAATTGGGACAGGAAGGTGAGAATGGTGGTGGTGGTAATGGAGTGGTTGAGCAACTTTTGC AAAGTCAAAATGGGATGACTGTTGTTGGGTCAAGGAATGAAGAAAATGGTATTGAAGGAGCGGTGACGCAAAGAG TGATTACCCCGCCTATGAATGGTTTAGTACCTCTTTCTCTTGATTCGAATCCGAATCCGAATCCGAATACCATTT CGTCGGGGGTGGAGGGAACAAAATCTGTTTCGGCATCGGCATTGGAATCTCAAACGCGGTTAGGGAAGGAAAGAA AGGGGGATGATGATGATGATAGTTTGATTGATCCTCTCTACGAAATGCGAGTGTGGTGGTAG